Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00006 ATGACAACCCAATCTCCTCGCTTCCTCCCTTCACTCTTGCTCCTCACAGTCACACTCTACAACCTCCGCACAACCGCCGCCGCAGTCAGATCCTCCGCCGCTGCCAACCCCGACGCTGCCACTTTTATCCGTACAAGCTGTAGGAGAACCCTCTACCCCGACCTCTGCGTCTCCTCTCTCTCTTCCTTTACGAATACTATCCAAAATAACCATGCTATGCTCGCTCGCGCCGCCATAACTGTTAGCCTCTCCAGGGCCCAGAGCATGGCCTCCTACGTCTCGAACCTCCTCCGTCAAGCCAACAAGAACGCCGACTCCGGCACCGCCTCAGCCCTCCGTGACTGCTCTTACAGCCTCGGAGTCGCCGTTGATAACATCCGCGGCTCATTCAAGCAGATGCAACAGATGACTGATAAAAGCGCCGTTAACGGCGAGAAATTCAGGTTCCAGATGAGCAGCGTTCAGACGTGGATGAGCACAGCGATGACGGAGGAGCAGGCGTGCAGCGAGCGCTTCGACGCTTCACCGGACGGTAGGGTGAAGACGGATGTGCGCCGTCAAGTGACGGAGGTGAAGAAGTTTATCAGTAATGCGCTCGCGCTGGTGCAAGGTTACGGGAATAACGTGAGAAAACATTAA 639 0.5618 MTTQSPRFLPSLLLLTVTLYNLRTTAAAVRSSAAANPDAATFIRTSCRRTLYPDLCVSSLSSFTNTIQNNHAMLARAAITVSLSRAQSMASYVSNLLRQANKNADSGTASALRDCSYSLGVAVDNIRGSFKQMQQMTDKSAVNGEKFRFQMSSVQTWMSTAMTEEQACSERFDASPDGRVKTDVRRQVTEVKKFISNALALVQGYGNNVRKH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00006 212 NCBIfam pectinesterase inhibitor domain 16 203 IPR006501 GO:0004857
Pral4512g00006 212 CDD PMEI-like_3 45 202 - -
Pral4512g00006 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 201 - -
Pral4512g00006 212 Pfam Plant invertase/pectin methylesterase inhibitor 42 201 IPR006501 GO:0004857
Pral4512g00006 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 203 IPR035513 -
Pral4512g00006 212 SMART PMEI_2 38 201 IPR006501 GO:0004857
Pral4512g00006 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00006 Pral-Chr4512 69861 70602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00006 43 204 Carbohydrate Esterase AT5G53370 26.829 5.45e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00006 - - pcin:129321198 293.893