Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00003 ATGATCAAATCCAAAAGCTTTCTTCAAAGTATTATGAAACATCTCAAATTCGGTTCAAGGAAAGAGAGACAGAACGAAGACGACATTCAGAGGATTGCCGCCAAGGAGCAGAAGGTGTTTTCCTACGAAACGTTAGTTTCGGCAACGAAGAATTTCAATCCTAATCACAAGCTGGGCGAGGGAGGATTCGGACCAGTTTACAAGGGGAAGCTCGAAGATGGAAGAGAGATCGCAGTGAAGAAGCTATCAGTGAGATCGAATCAGGGGAAGAAGGAGTTCGTAAACGAGGCGAAATTGTTGGCGCGTGTGCAGCACCGCAATGTTGTGAATCTGTTGGGCTATTGTGTATTTGGCTCCGAGAAGCTTCTCGTGTATGAATATGTTCCTCATGAGAGCCTTGACAAAATTCTCTTCAGATCAGATAGGAGAAAAGAGCTTGACTGGCAAAAGAGGTTTGCAATAATAGCAGGAATAGCTAGAGGATTGCTTTATCTTCACGAAGATGCACACGACTGTATAATTCACAGAGACATAAAAGCTAGCAATATTCTGCTCGATGGTAAATGGAATCCCAAGATCGCAGATTTCGGCATGGCTCGTCTCTTCCCTGAAGATGAAACCCATGTTAAAACCCGTGCAGCTGGAACCAATGGATATATGGCTCCAGAATACATGATGTACGGGAATTTATCAACAAAAGCAGACGTATTTAGTTTTGGAGTTCTGATATTGGAGATCATTAGTGGTCAACGAAACCTATCATTTAACTTGGATCTGGATTCACAGAACCTTGTCGACTGGGTATACAAGCTTTACAAAAAAGGACGAAGCTTAGAAATTATGGACACTGCAATAGCAGCTTCAGCAGTGCCTGAACAAGTGGCAATGTGTATTCAACTAGGCTTGCTATGTATTCAAGGTGACCCCAAAGACCGGCCTCCCATGAACCGGGTCATGGTGGTGTTGTCGAAAAAGCCGGGCCACTTGGAAGAACCGAAGAGACCCGGTGTGCCGGGTTCAAGATACCGAAAGCATCATAATCCTTATGCATTGTCTTCCACAATGGGTAGTAGTTCTGGTGGATTTGGTTCACATTCTGGTGTTTCGAGCAATCCTTACAATACAAGGTCAACGGCAACGGCGACCACAGCCGCCACAGCCGCAACCACAACCACCTCTACTTCTAGAGAATTAGACCCTCGTGGAAAACGTGTAATTGAGGAGGGTTAG 1230 0.4488 MIKSKSFLQSIMKHLKFGSRKERQNEDDIQRIAAKEQKVFSYETLVSATKNFNPNHKLGEGGFGPVYKGKLEDGREIAVKKLSVRSNQGKKEFVNEAKLLARVQHRNVVNLLGYCVFGSEKLLVYEYVPHESLDKILFRSDRRKELDWQKRFAIIAGIARGLLYLHEDAHDCIIHRDIKASNILLDGKWNPKIADFGMARLFPEDETHVKTRAAGTNGYMAPEYMMYGNLSTKADVFSFGVLILEIISGQRNLSFNLDLDSQNLVDWVYKLYKKGRSLEIMDTAIAASAVPEQVAMCIQLGLLCIQGDPKDRPPMNRVMVVLSKKPGHLEEPKRPGVPGSRYRKHHNPYALSSTMGSSSGGFGSHSGVSSNPYNTRSTATATTAATAATTTTSTSRELDPRGKRVIEEG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00003 409 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Pral4512g00003 409 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4512g00003 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pral4512g00003 409 MobiDBLite consensus disorder prediction 326 409 - -
Pral4512g00003 409 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 380 - -
Pral4512g00003 409 SUPERFAMILY Protein kinase-like (PK-like) 37 333 IPR011009 -
Pral4512g00003 409 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Pral4512g00003 409 FunFam Cysteine-rich receptor-like protein kinase 2 128 330 - -
Pral4512g00003 409 CDD STKc_IRAK 58 324 - -
Pral4512g00003 409 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Pral4512g00003 409 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4512g00003 409 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672|GO:0006468
Pral4512g00003 409 MobiDBLite consensus disorder prediction 350 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00003 Pral-Chr4512 48879 53046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00003 20 336 Receptor kinase-like Gene Family AT4G11530 49.689 1.76e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4512g00003 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00003 - - gmx:100795769 570.081