Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4509g00003 ATGCATTCCAGCGAGTTCGACGGCGCCGCAGCCTTCTCCGGCGGTGGTTTTATGCCGTCTCAGGCAGCTCAAGGCCATGAACTTTCCTTCTCCTACACCACGAATCGTGATGCTCAGTCATTGCTTCCTCTGACGGTCAAGCAGATAAATGATGCATTTCAGTCAAGTGATGATAAGTCTAATATGATTATTGACGGCGTGGATGTTAATAATGTCACTCTTGTAGGAAGGGTGTGCAACAAGGCTGGAAGGATTACTGATGTTACTTTTGTACTAGATGATGGGACTGGAAGGATTGAGTGCAGTAAATGGCTTCAGGAAGATGTAGACGCTAATGAAGCGGAGGGTCTCAGGGATGGAATGTATGTGCGCTTACATGGACATTTGAAGGGTTTTCAGGGGAAAAGGACCTCAAATGTATTCTCTTTTAGAGTGCTGGCCTATAGTGAAGGTGGTTGGGTTTTGGGAAATGCATATGATAGGAACCTTACTAAATCCTGCTAG 504 0.4583 MHSSEFDGAAAFSGGGFMPSQAAQGHELSFSYTTNRDAQSLLPLTVKQINDAFQSSDDKSNMIIDGVDVNNVTLVGRVCNKAGRITDVTFVLDDGTGRIECSKWLQEDVDANEAEGLRDGMYVRLHGHLKGFQGKRTSNVFSFRVLAYSEGGWVLGNAYDRNLTKSC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4509g00003 167 Gene3D - 34 150 IPR012340 -
Pral4509g00003 167 Pfam OB-fold nucleic acid binding domain 72 135 IPR004365 GO:0003676
Pral4509g00003 167 PANTHER REPLICATION PROTEIN A-RELATED 5 144 IPR040260 -
Pral4509g00003 167 FunFam replication protein A 32 kDa subunit A-like 34 151 - -
Pral4509g00003 167 CDD RPA2_DBD_D 71 146 - -
Pral4509g00003 167 SUPERFAMILY Nucleic acid-binding proteins 41 146 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4509g00003 Pral-Chr4509 111823 113326 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4509g00003 3 146 Core DNA Replication Machinery Family AT2G24490 55.172 3.62e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4509g00003 K10739 - qsa:O6P43_022320 221.09