Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4509g00002 ATGGACACTAGTGCTCTAGGATTGTCCGAGCCTGTAAGATCAAAGCTAGAAAGCCCAAAGTGTCTCATGAAGGTGGAAGCCATGGCTGTTTTGCTGGCCCAATACGATGTTTTCTTGAGCTTCAGAGGTGAAGACACTCGGGCATCTTTTACTTCTCATCTCTACTCCGCTCTAAGCAATGTTGGAATTCTTGTTTTCAAAGATGATTTGGACCTTCCTCGGGGAAACCACATCTCAATCGAATTGCCACGTGGAATTGAACGTTCTACAATTTCAATTATTATCTTCTCCAAGAATTATGCTGGTTCTAAATGGTGTCTCAATGAGCTCTCAAAAATTATGGAATTTTATAGAGTACTAGGTCGGGTAATTCTGCCTGTGTTCTATGATGTGGATCCGTCTGAAGTTCGTAATCAAATGTCAAGTTTTGGAGCAGCGTTTCGAGATCTTATACAAAGAAGTTCTCCCACAGAAAATGAAGTGTCGAGGTGGAGGATAGATCTACGTGAAGCTGGGGGCATTGCAGGGTTTGTTGTGCTCAATTCCAAGAATGAAAGTAAGGATATCAAGACTATCGTTGAGCATGTCTGTAAAATATTGGACAAGAAAGACTTGTTTATTGCTAACCATCCTGTAGGAGTGGACTCTCGTTTGCAAGATTTGATTAAAATATCAAAAAGCCATTCAATGAATGATGTTCTCCTCCTAGGAATATGGGGGATGGGGGGCATCGGCAAAACAACTATCGCCAAAGCCATCTATAATAAAATTGGTCGAACATTTGACAGCAGAAGCTTTCTTTCAAACATTAGGGAAGTATGGGGGCAAGATAATGGTCCAATTAGCCTGCAGCAACAACTTTATTCAGAAATCAGTAAAACAACAATGGTGGTAATACGTAGCATTGATTCAGGAAAAATCACATTGAAGGAGTCTCTTTGCCATAAGAAAGCACTTGTTGTGCTTGATGATGTGAATGAGGTTGAGCAACTAAACACTTTATTTGGAAGTCGCGACTGGTTTGGTCCAGGAAGTAGAATAATAATCACTTCTAGAGATAGGCATCTGCTCGAACTCCTTGAAGTGGATCATGTATATAAAATAAAGGAAATGGACAGAAGTGAATCTATTGAACTTTTTAGTTGGCATGCATTTAAGCAACTAAGTCCTAAAGAGGCATTCATTGACCTTTCTAGAAATATAGTTGCTTATTCTGGAGGACTACCTCTAGCCCTTGAAATCCTAGGCTCCTATCTATTTGAGAGGACGAAGAAAGAGTGGAGAAGTGTACTGGACAAACTAAAAAGAATCCCCAATGATGAGATACAAAAGAAGCTAAGAATAAGTTTTGATGGTTTAGGTGATGATATTGTGAAAGAAATCTTCCTTGATGTATCTTGCTTCTTTATTGGGATGTATAGGAGTGATGTCACACAAATATTAGATGGTTGTGGTCTTTTCCCAGACATTGGAATTAGTGTCCTTGTGGAGCGGAGCCTTGTAACTGTTGATGAGAAGAATAAGCTAGGGATGCATGATTTGTTACGAGATATGGGGAGGGAGATAATCCGAGAACAATCACCTAAAGAGCTTGGAAAGCGTAGTAGGTTATGGTTTCATGAAGATGTGCATGATGTATTATCAAAACATACTGGTACAGGATTTGTCGAGGGGCTAGCTTTGAATTTGTCACAAACCAATAAAGATTGTTTTTGTACCAACACATTTAAGCAGATGAAAGCACTCAGATTGCTTCGCCTTGGTAATGTGGAACTTGATGGAGACTATAAATACATTAGTAGGGATCTCAGATGGCTTTATTGGCGTGGCTTTCCTTTGAAATACATCCCTGCTAACCTTTACCAGAAAAATTTAGTTGCTATTGAGTTAAAGTACAATAGCCTCAAACAAGTTTGGAGGGAGCCTCAGTTATTGGAGAGGTTAAAAATCCTAAATTGTAGTCATTCCCCTTTCTTGATGCAGACTCCTGACTTCTCAAAACTACCGAATCTTGAAAAGTTGATTCTTAAAAATTGTCCAAAATTGTCCATGGTTCATCCTACTATTGGGCATGCCAATCAACTCCTTCTAATAAACTTGAAGGATTGCACTAGCCTTTTCACTCTCCCAAGAAGTATTTATAATTTAAAGTCACTAAAAACTCTTATCCTATCAGGTTGTATAGGGATTGAAAAGTTAGAAGAAGATATAGAGCAAATGGATTCCTTGACAACTTTGGTTGCTGATGACACCGCAATAACACAAGTGCCCTTATCTTTACCGACTTGGCATGATGCGTTCTTGAGCTTCAGAGGCGAAGACACCCGGGCGTGTTTCACTTCTCATCTCTTCTCCGCTTTAACTGATGCTAGAATTGTTGTTTTCAAAGATGATACCGACGTTCCTAGGGGGAAGCGTATCTCAACTGAATTGCTATTTGGAATTGGACGTTCTACAATTTATATCATCATCTTCTCCAAAAATTATGCTGGTTCTAGATGGTGCCTCATTGAGCTCTCCGAAATCATGAAGCGTCACAGAGCACAAGGTCGAGTAGTGTTACCTGTGTTCTATGGCGTGGATCCATCCGTGGTTCATAATCAACTCTCTAGTTTTGGAGAAGCATTTCAACATCTTATACATAAAAATTCACCCCCCGCAAATGAAGTGTCGAGGTGGAGGACAGATCTCCGTGAAGCTGGGGGTATTGAAGGGTTTGTCATGCTCAATTCCAAGAATGAACGAGAGGATATCCAGAATATTGTTGATTGTGTTTGTGAAATATTGGACAAGAAAGACTTGTTTATTGCTAACTACCCTGTCGAAAAGGACTCTCATATGCAACATTTGATTAGAATGTCAAAAAGCCATCCAACAAATGATGTTCACAAGTACGATGTGTTCTTGAGTTTTAGAAGCAAAGACACTTGGGCATCTTTCACTTCTCATCTTTATGCCTCCTTAGGTAATGCTGGACTTGTTCTTCCCAGAGAGGATGACGACCTTTCTATGGGGAATGATATCTCAATCCAATTGCCACTTGAAATTGAACGTTCTACAATGTCAATCATTATCTTCTCCAAAGATTATGCTGGTTCTAGATGCTGCCTCAACGAGCTGTCCAAAATCATGGAGCTTTACAGAGCAGATGATCAGGTAGTCTTGCCTGTGTTTTATGGCGTGGATCCGTCTGAAGTTCGTAATCGACTCTATAGTTTTGGGACTTCATTTCAATTGCTTATACAAGAAAGTTCACCTACAAAAGATCAAGTGTCGAGGTGGGAGACTGATCTCCACGAAGCTGGAGGCATTGCAGGGCTTGTTGTGCTCAATTCCAAGAATGAAAGTGAGGATATCAAGAAAATTGTTGAGCATGTTCGTAAAATGCTGGACAAGAAAGACTTGTTTATTGCTAAACATCTCGTTGGAGTGGACTCTCGTTTGCAAGATTTGATTAACATATTACAAAGCTATTCAGTGAATGGTGTTCTCCTGCTAGGGATATGCGGGATTGGGGGTATCGGCAAAACAACCATTGCCAAAGCCATCTATAATAAAATTGGTCGAACATTTGAGAGCAAATGCTTTCTGCCAAACATTAGGGAAGTTTGGGGGCAATATAATGGTCCAGTTAAGTTACAGCATCAACTTCTTTCAGAAATTTGTAAAACAACAACGAGTGCATCGCGTAGCATTGATTCAAGAAAAATCACATTGGAGGAACTTCTTCCCCATAAGAGAGCACTTCTCGTAATTGATGGTGTGAATGAGGTTGAGCAACTAAATGCTTTGTTTGGAAGTCGGAAATGCTTTGGTCCAGGAAGCAGAATAATTATCACTACGAGAGATAAGCATCTGCTCAAACTCCTTAACATGGATCATGTATATACAATGAAGAACATGGAGATATGGGAATCTATTGAGCTTTTTTGTTGGCATGCATTTAAGCAACCATATCCTAAAACAGGTTTCATTGACCTTTCTAGAAATATAGTTGCTTATTCTGGAGGAGTACCTTTAGTCCTTGAAGTCCTAGGTTCTCATTTATTTGATAGGGAAGAGAAAGAGTGGATAAGTGTACTGGACAAACTAAAAAGAATCCCCAATGATGAGATACAAGAGAAGCTAAAAATAAGCTTTGATGGTTTAACTGCGACGGAAAAACAAATCTTCCTTGATATATCTTTCTTCTTTATTGGGATGGATAGGAGTGATGTTACACGGATATTGGATGCTTGTGGATTTTTTTCAGACATGGGAATAAGTGTCCTTGTGGAGCGGAGCCTTGTAATTGTTGATGAGAAGAACAAGCTTAGCATGCATGATTTGCTGCGAGATATGGGGAGGGAGATAGTCCAAGAACAATCACCAAAACAGCCTGGAAAGCGTAGCAGATTATGGTTTAATGGAGATGTGCTTGATGTCTTATCAAAACATACTGGTACAGAATTTGTCGAGGGGCTAGCTTTGAACTTGTCACAAACCCATAAAGATTGTTTCTCTACCAAAGCATTTGAGAAGATGAAGTCACTCAGATTGCTCCGTCTTGATAATGTGGATATTGATGGAGACTATCGACACATTAGTAGAGATCTCAAATGGCTTTGTTGGCATGGCTTTCCTTTGAAATACATCCCTGCCAATTTTTATCAGGAAAATTTAGTTGCTATTGAGTTAAAGTACAGTAACCTCAGACAAGTTTGGAGGGAAACCCAGTTATTGCACAGGCTAAAAATCCTCAATTGTAGTCACTCCCCTTCCTTGATGCAAACTCCTGACTTCACAAAACTTCCAAATCTTGAAAAGTTGAACCTTAAAAATTGTCGAAGTTTGTGCATGGTTCATCATTCCATCGGATGTGCCCATAAACTTCTTCACATAAACTTGAAGAATTGTACCAACCTTCGCACTCTCCCAAGAAGTATTTATAATTTAAAATCACTAAAAACTCTTATTCTAGCTGGTTGTGCAATGATTGAAAGGTTAGAAGAAGATATAGAGCAAATGGATTCCTTGACAACTCTGGTTACTGATGAGACTGCAATAAGACAAGTGCCATTTTCTTTTGTGAGGTTAAAAAGTGTTGGATTTATATCTATTGGTGGCTACAGCGGATTGTCAAGTGATGTGTTTCCTTCTCTCATTTCATCATGGATGTCCCCAACAAATAATCCTTTATCTCTTATCTCAACATATGTGGGCATGACAATTTCCTCGGATATATTGAATAGGAATATCCCTAGTCCTTCATCTATTTGTGACAACCAGTCAAAGCTACAAAGCCTTTTTTTGAAAATCACATCAGAGAATGACCCTGAAGTTACTCGAGGTGCTTCAAAAATTCTGGAGTCCTCCCATGCTAGAATTTGCATGGACAAGGCAACAGTACCAAATACTTCAAAAATCTTAGAGATTGAATCTTCTGTGTTATCTGGTCACACCTCAAGATCAGAAAATTGCTTGAGACATCTTTTAATTCAGATTGGAAATAATGACCAAGTCACTGCTACGCTTCTAGAGAATATCTCACAGGGATTGACTACCAAGAATTACGGTGATGATTATGTCCTTCCTGGTGACAATTATCCTTATTGGCAAAGTTTCAAAGGTCAAAAAGCTTCTGTGAAATTTAAAGTGCCTCAAGTTAGCAGCTTTGATTTGAAAGGGATAATTATTTGTTGTGTATATTTCCCTTCATGTGATTTGGGTAACAAAGCCTGTGAATCTTGTATTAGCCTAATGATCATAAATTATACAAAGAAAACCACTCTACACTACAGGCAAGATTCACTGACTTCGTTTGAAGAAGCAGAGTTGAAGGAAATAATATCAAATCTTGACTCAGATGACCAAGTTGAGGTGATTATAGCTTTTGGTAATGGGTACACTATGGAAAGGACAGCAGTCTACTTGAAGTATTATGAGTCATTTGATGAACAAATAGAGCATCTACCACCACCAAGTAAAGAAATTGATGAGAAGCCCATGCAGACTTATGTCAGGAGGAGGAAGCGACAGAAGATAGATTAA 6030 0.3907 MDTSALGLSEPVRSKLESPKCLMKVEAMAVLLAQYDVFLSFRGEDTRASFTSHLYSALSNVGILVFKDDLDLPRGNHISIELPRGIERSTISIIIFSKNYAGSKWCLNELSKIMEFYRVLGRVILPVFYDVDPSEVRNQMSSFGAAFRDLIQRSSPTENEVSRWRIDLREAGGIAGFVVLNSKNESKDIKTIVEHVCKILDKKDLFIANHPVGVDSRLQDLIKISKSHSMNDVLLLGIWGMGGIGKTTIAKAIYNKIGRTFDSRSFLSNIREVWGQDNGPISLQQQLYSEISKTTMVVIRSIDSGKITLKESLCHKKALVVLDDVNEVEQLNTLFGSRDWFGPGSRIIITSRDRHLLELLEVDHVYKIKEMDRSESIELFSWHAFKQLSPKEAFIDLSRNIVAYSGGLPLALEILGSYLFERTKKEWRSVLDKLKRIPNDEIQKKLRISFDGLGDDIVKEIFLDVSCFFIGMYRSDVTQILDGCGLFPDIGISVLVERSLVTVDEKNKLGMHDLLRDMGREIIREQSPKELGKRSRLWFHEDVHDVLSKHTGTGFVEGLALNLSQTNKDCFCTNTFKQMKALRLLRLGNVELDGDYKYISRDLRWLYWRGFPLKYIPANLYQKNLVAIELKYNSLKQVWREPQLLERLKILNCSHSPFLMQTPDFSKLPNLEKLILKNCPKLSMVHPTIGHANQLLLINLKDCTSLFTLPRSIYNLKSLKTLILSGCIGIEKLEEDIEQMDSLTTLVADDTAITQVPLSLPTWHDAFLSFRGEDTRACFTSHLFSALTDARIVVFKDDTDVPRGKRISTELLFGIGRSTIYIIIFSKNYAGSRWCLIELSEIMKRHRAQGRVVLPVFYGVDPSVVHNQLSSFGEAFQHLIHKNSPPANEVSRWRTDLREAGGIEGFVMLNSKNEREDIQNIVDCVCEILDKKDLFIANYPVEKDSHMQHLIRMSKSHPTNDVHKYDVFLSFRSKDTWASFTSHLYASLGNAGLVLPREDDDLSMGNDISIQLPLEIERSTMSIIIFSKDYAGSRCCLNELSKIMELYRADDQVVLPVFYGVDPSEVRNRLYSFGTSFQLLIQESSPTKDQVSRWETDLHEAGGIAGLVVLNSKNESEDIKKIVEHVRKMLDKKDLFIAKHLVGVDSRLQDLINILQSYSVNGVLLLGICGIGGIGKTTIAKAIYNKIGRTFESKCFLPNIREVWGQYNGPVKLQHQLLSEICKTTTSASRSIDSRKITLEELLPHKRALLVIDGVNEVEQLNALFGSRKCFGPGSRIIITTRDKHLLKLLNMDHVYTMKNMEIWESIELFCWHAFKQPYPKTGFIDLSRNIVAYSGGVPLVLEVLGSHLFDREEKEWISVLDKLKRIPNDEIQEKLKISFDGLTATEKQIFLDISFFFIGMDRSDVTRILDACGFFSDMGISVLVERSLVIVDEKNKLSMHDLLRDMGREIVQEQSPKQPGKRSRLWFNGDVLDVLSKHTGTEFVEGLALNLSQTHKDCFSTKAFEKMKSLRLLRLDNVDIDGDYRHISRDLKWLCWHGFPLKYIPANFYQENLVAIELKYSNLRQVWRETQLLHRLKILNCSHSPSLMQTPDFTKLPNLEKLNLKNCRSLCMVHHSIGCAHKLLHINLKNCTNLRTLPRSIYNLKSLKTLILAGCAMIERLEEDIEQMDSLTTLVTDETAIRQVPFSFVRLKSVGFISIGGYSGLSSDVFPSLISSWMSPTNNPLSLISTYVGMTISSDILNRNIPSPSSICDNQSKLQSLFLKITSENDPEVTRGASKILESSHARICMDKATVPNTSKILEIESSVLSGHTSRSENCLRHLLIQIGNNDQVTATLLENISQGLTTKNYGDDYVLPGDNYPYWQSFKGQKASVKFKVPQVSSFDLKGIIICCVYFPSCDLGNKACESCISLMIINYTKKTTLHYRQDSLTSFEEAELKEIISNLDSDDQVEVIIAFGNGYTMERTAVYLKYYESFDEQIEHLPPPSKEIDEKPMQTYVRRRKRQKID 2009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4509g00002 2009 MobiDBLite consensus disorder prediction 1984 2003 - -
Pral4509g00002 2009 ProSiteProfiles TIR domain profile. 963 1130 IPR000157 GO:0007165
Pral4509g00002 2009 SUPERFAMILY "Winged helix" DNA-binding domain 440 547 IPR036390 -
Pral4509g00002 2009 SUPERFAMILY L domain-like 523 760 - -
Pral4509g00002 2009 Gene3D - 371 454 IPR042197 -
Pral4509g00002 2009 Gene3D - 1301 1384 IPR042197 -
Pral4509g00002 2009 MobiDBLite consensus disorder prediction 1984 2009 - -
Pral4509g00002 2009 FunFam Disease resistance protein (TIR-NBS-LRR class) 32 202 - -
Pral4509g00002 2009 Pfam NB-ARC domain 1148 1370 IPR002182 GO:0043531
Pral4509g00002 2009 Pfam NB-ARC domain 231 440 IPR002182 GO:0043531
Pral4509g00002 2009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 464 IPR027417 -
Pral4509g00002 2009 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 177 IPR035897 -
Pral4509g00002 2009 SUPERFAMILY L domain-like 1453 1764 - -
Pral4509g00002 2009 Gene3D - 32 206 IPR035897 -
Pral4509g00002 2009 Gene3D - 961 1136 IPR035897 -
Pral4509g00002 2009 Gene3D - 762 937 IPR035897 -
Pral4509g00002 2009 FunFam Disease resistance protein (TIR-NBS-LRR class) 761 931 - -
Pral4509g00002 2009 SUPERFAMILY Toll/Interleukin receptor TIR domain 761 905 IPR035897 -
Pral4509g00002 2009 ProSiteProfiles TIR domain profile. 33 200 IPR000157 GO:0007165
Pral4509g00002 2009 Gene3D Ribonuclease Inhibitor 1472 1683 IPR032675 -
Pral4509g00002 2009 Gene3D Ribonuclease Inhibitor 527 760 IPR032675 -
Pral4509g00002 2009 PRINTS Disease resistance protein signature 235 250 - -
Pral4509g00002 2009 PRINTS Disease resistance protein signature 714 730 - -
Pral4509g00002 2009 PRINTS Disease resistance protein signature 312 326 - -
Pral4509g00002 2009 PRINTS Disease resistance protein signature 405 419 - -
Pral4509g00002 2009 SUPERFAMILY Toll/Interleukin receptor TIR domain 957 1106 IPR035897 -
Pral4509g00002 2009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 745 IPR044974 GO:0006952
Pral4509g00002 2009 Pfam TIR domain 964 1131 IPR000157 GO:0007165
Pral4509g00002 2009 Pfam TIR domain 34 198 IPR000157 GO:0007165
Pral4509g00002 2009 Pfam TIR domain 764 928 IPR000157 GO:0007165
Pral4509g00002 2009 SMART AAA_5 232 375 IPR003593 GO:0016887
Pral4509g00002 2009 SMART AAA_5 1162 1302 IPR003593 GO:0016887
Pral4509g00002 2009 SMART till_3 763 903 IPR000157 GO:0007165
Pral4509g00002 2009 SMART till_3 964 1104 IPR000157 GO:0007165
Pral4509g00002 2009 SMART till_3 34 174 IPR000157 GO:0007165
Pral4509g00002 2009 Gene3D - 1137 1296 IPR027417 -
Pral4509g00002 2009 Gene3D - 207 366 IPR027417 -
Pral4509g00002 2009 ProSiteProfiles TIR domain profile. 762 929 IPR000157 GO:0007165
Pral4509g00002 2009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1132 1394 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4509g00002 Pral-Chr4509 38753 108942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4509g00002 35 760 WRKY Transcription Factor Family AT4G12020 30.563 5.00e-85 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4509g00002 - - pcin:129288835 1443.33