Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4508g00001 ATGATGAATAACATGGGAGGAATTTCTTGTGGTCCAATGCAAAAGAAGCTCAAAATTAGTTGTGAGTTATTAACTGATATAGAGAAAGATATATTTTTTAATATAGCTTCTTTTTATGTGGGTCAGAGTAAACACCATGTTACACAATTGTTAAAAAGCTCAAGACTTCCTGCCGAAACGGGAATGTCAGTAATCATTGAGCGTAATCTTGTAAAGGTCATGAATGACAAGCTTTATGTTCATGATTTGCTACAAGAGATGGGAAAGGAAATCAGTCATAGTAAGCCGAAGTTCATATATAACTATGACGTATTCTTAAGTTTTAGAGGTGACGACACACGCAAATCTTTCACTTCTCATCTTTGCAGTGCTTTAAAGCAAGCAGGTATTGAGGTCTACATGGATGAGGAAAGAATTGAAAAGGGAGAAAATATTTCATCTTCATTATTGGAAGCAATTGAAAGTTCAAGAATTTCAATTATTATATTCTCAAAGAATTATGCTGGCTCTAGTTGGTGCTTACAAGAATTAGAGAAAGTCATGGAGTGTTACAAAACAACTCATCAAGAGGTTTTACCTATATTTTTTGATGTGCGACCTTTTGAAGTTCGTAAACAACAAAACGCTTTTGGAAAAGCATGGGAAAGACTTATTAAGAGAACTTCAAGTGGCAAAATGAAGAAATTGACAACCAATGTAAAAAGAGCCCTTACAGAAGCTGCCAATTTATCTGGGTGGGACATGCATAACTACAGAACTGAAGTCGAATTAATTGGCCATGTTACTGAAACTGTTAGAATGAAGATAGGTGACAACAAATGCCTGTTTGTTGCTCACCATCCAGTGGGATTGAAGTCTCGCGTGCAAGATATCATCCAATTGCTAAGTAGTAAATCAAATGAGGTTATCATTTCAGGGATTTGGGGAATGGGGGGTGTTGGCAAGACAACAATTGCTAAAGCCATCTATAATGAAGTTGGTCAAAGTTTTGACGGAAAGTGCTTCCTTGCAAATGTTAGGGAAGTTTGGAAGCAAGATAATGGTCCGGTTTACTTGCAAGAACAACTTCTTTCAAGTATCTTAAAATCAAGAAGGATGACACTACCTGATGTAGAAATGGGAAAAACTCTAGTAAAGGAAATCCTTTGTAAGAAAAAAGTGATTGTTGTACTTGATGATATGAACAATGAAGACCAACTAAAAGCTCTGTGCGGAAGTCTTGAGTGGTTTGGTCAAGGTAGTAGAATCATTATCACTACTAGAGATCAACATTTACTTAACGTCTTAAGAGTGATTCATGTATATAGTGTGAAAGAATTGGATGACAACGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAGCAAGCAATACCTGAACAAGATTTCATTGAACTTTCAAGAAGGATAGTTTCTTACTCTGGAGGGTTGCCCCTAGCTCTTGAAATCCTTGGCTCCTATTTATATGATAGAGAAATATTGATTTGGAGAAGTGTTTTGGAGAGATTACAACAAATTCCAAATGATCAAATCCATGAGAAGCTTAAAATAAGCTATGATGGTTTGAGCGATGATATAGAGAAAGAAATATTTCTTGATATATGTTGTTTCTTTATTGGGAAGAACAAGAGCGATGTGACACAAATATTGAATGGTTGTGGACTTCATGCAGATATTGGAATTAGTCGCTTGATTGAACGAAGCCTTGTAAGAGTTGGCAACAAAAATAAGCTTGAAATGCATGACTTATTGCGTGACATGGGAAGAGAAATTATTCGTCAGCAGTCATTAGAGGAGCCTGAGAAACGTACTAGATTATGGTTTCATGACAATGTGTTGGATGTGTTAAGAGATAAAACTGGAACAATGTCCATCAAAGGACTGGCTTTAAACTTGTCAATGAACAATTCATTGTACTTGAGTGCCAAAACATTTAAGAATATGAGGAGGCTTCGTTTGCTTCAACTTGATAATGTACAACTTATTGGAGATTATAGTTATCTATCAACAAATTTGAGATGGCTTTGTTGGCATGGGTTTCCCTTAGAAAGCTTGCCAATGAACTTCAATCTAGAGAAGATAGTTGCCATTGACTTAAAGTGGAGTAATCTTGTGAAAGTTTGGGAGAAGAGCCAGTTGCTGGAGGGGTTGAAAATTCTCAACCTTAGTCATTCTCATTGCTTAATAGAGACACCTGACTTTTCAAAGATACCATATCTTGAAAAGTTAATACTCAAAGATTGTCCTCGTTTGTCTATAATTCACCATTCCATTGGTGATCTTCAATATATTGTTATGTTAAATTTAAAGGACTGTAAAAGCCTCAGCCACCTCCCGAGAAGTGTATATCAATTGAAATCCTTGAAGACCCTCAATCTCTCTGGTTGTTCAAAGTTTGAAAAGCTAGAAGAAGACATTGAACAAATGGAATCTTTAACAACTTTGATGGCAAATCAAACTTCTATGGCTCAAGTTCCTTTCTCATTGTTGAGACTGAAAAGTATTAAATATGTGTCTCTGTGTGGCTATGAAGGATTATCACGTGATGTATTTCCATCTCTTTCTTTGTCTTGGATGTCACCATCAACACATTATTCAAAGTCATTGTCGCAAGCATTTTGGTCCATGCCAGCTTTAATTAGGGGTCTATCACATCCTTTATCTTCAAGAAGATATGAAACATCAGAAGCAAGACCGAGCACATCTCAGGTTTCATGCCAAAATGCTCCGGCATTACTTGAATTTCATGATCAAGTTCACAGAGAAAGGTCAGAAACATTGATGAGTTCTTTGATTATTCCAGTAGGGCAGTTCAACAAAATTACAGATGCCCTTCTAAAGAGTATTTCAAAGGGAAGGAATGGAGGGCTTCACTATTGTCCTCCTAAAGAAAATTATCCTGATTGGTTAGTTTTTGAACATGAGGGATCTTCAGTGTCATTTGAAGTTCCTGAAGTTTCTGGTCATAGCTTAAAGGGAATGGTCCTCAGCGTTATCTATTCATCTCTTCAAGGTAGCATGGTATCTGTAAACTCTATTGGTCTCATGATAAAGAATTTCACAAAGGCTACCATGCATTTCTACGAGCAAGAAGTCACAATAATTACTTCTGCCAATGAAGAATGGCAGAACATAGTATCTAATTTGGAGCCTGGAAATGAGGTGGAAATTGAAATCAAGTTTGCATACAAACATATTGTGATGAAGAAGACTGCAGTTTATCTTTTATATGTTGAAGAAACTGACAAGCTGATCCCTCTAGATGGCATTCAATCATAA 3279 0.3629 MMNNMGGISCGPMQKKLKISCELLTDIEKDIFFNIASFYVGQSKHHVTQLLKSSRLPAETGMSVIIERNLVKVMNDKLYVHDLLQEMGKEISHSKPKFIYNYDVFLSFRGDDTRKSFTSHLCSALKQAGIEVYMDEERIEKGENISSSLLEAIESSRISIIIFSKNYAGSSWCLQELEKVMECYKTTHQEVLPIFFDVRPFEVRKQQNAFGKAWERLIKRTSSGKMKKLTTNVKRALTEAANLSGWDMHNYRTEVELIGHVTETVRMKIGDNKCLFVAHHPVGLKSRVQDIIQLLSSKSNEVIISGIWGMGGVGKTTIAKAIYNEVGQSFDGKCFLANVREVWKQDNGPVYLQEQLLSSILKSRRMTLPDVEMGKTLVKEILCKKKVIVVLDDMNNEDQLKALCGSLEWFGQGSRIIITTRDQHLLNVLRVIHVYSVKELDDNESLELFSWHAFKQAIPEQDFIELSRRIVSYSGGLPLALEILGSYLYDREILIWRSVLERLQQIPNDQIHEKLKISYDGLSDDIEKEIFLDICCFFIGKNKSDVTQILNGCGLHADIGISRLIERSLVRVGNKNKLEMHDLLRDMGREIIRQQSLEEPEKRTRLWFHDNVLDVLRDKTGTMSIKGLALNLSMNNSLYLSAKTFKNMRRLRLLQLDNVQLIGDYSYLSTNLRWLCWHGFPLESLPMNFNLEKIVAIDLKWSNLVKVWEKSQLLEGLKILNLSHSHCLIETPDFSKIPYLEKLILKDCPRLSIIHHSIGDLQYIVMLNLKDCKSLSHLPRSVYQLKSLKTLNLSGCSKFEKLEEDIEQMESLTTLMANQTSMAQVPFSLLRLKSIKYVSLCGYEGLSRDVFPSLSLSWMSPSTHYSKSLSQAFWSMPALIRGLSHPLSSRRYETSEARPSTSQVSCQNAPALLEFHDQVHRERSETLMSSLIIPVGQFNKITDALLKSISKGRNGGLHYCPPKENYPDWLVFEHEGSSVSFEVPEVSGHSLKGMVLSVIYSSLQGSMVSVNSIGLMIKNFTKATMHFYEQEVTIITSANEEWQNIVSNLEPGNEVEIEIKFAYKHIVMKKTAVYLLYVEETDKLIPLDGIQS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4508g00001 1092 Gene3D Ribonuclease Inhibitor 593 883 IPR032675 -
Pral4508g00001 1092 Gene3D - 271 434 IPR027417 -
Pral4508g00001 1092 FunFam Disease resistance protein (TIR-NBS-LRR class) 99 270 - -
Pral4508g00001 1092 SUPERFAMILY "Winged helix" DNA-binding domain 510 616 IPR036390 -
Pral4508g00001 1092 SUPERFAMILY L domain-like 629 853 - -
Pral4508g00001 1092 Gene3D - 439 523 IPR042197 -
Pral4508g00001 1092 SMART till_3 101 243 IPR000157 GO:0007165
Pral4508g00001 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 100 246 IPR035897 -
Pral4508g00001 1092 ProSiteProfiles TIR domain profile. 100 269 IPR000157 GO:0007165
Pral4508g00001 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 102 847 IPR044974 GO:0006952
Pral4508g00001 1092 Pfam NB-ARC domain 286 509 IPR002182 GO:0043531
Pral4508g00001 1092 Gene3D - 99 270 IPR035897 -
Pral4508g00001 1092 PRINTS Disease resistance protein signature 304 319 - -
Pral4508g00001 1092 PRINTS Disease resistance protein signature 474 488 - -
Pral4508g00001 1092 PRINTS Disease resistance protein signature 783 799 - -
Pral4508g00001 1092 PRINTS Disease resistance protein signature 381 395 - -
Pral4508g00001 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 277 534 IPR027417 -
Pral4508g00001 1092 Pfam TIR domain 101 265 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4508g00001 Pral-Chr4508 9859 29927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4508g00001 96 855 WRKY Transcription Factor Family AT4G12020 30.087 1.01e-85 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4508g00001 - - pcin:129288830 1534.24