Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00020 ATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGAACTTAAATGTATTCTCTTTTAGGCTTTTGAGCGACTTTAACGAGATGGCAAGTCACTTCATCGATTGTATATGCGCTCATCTCTATAATACCAGGATACGGAATAGTGTGCCGAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACAAGAGGTTATCAAGCTGCCCCTTCAAATCAATTCTCTGGTCAGCACAAAGGTCAGAAGAGTGTTGAAGATATGGTCTTGGAGATCTTGCGTCTTCCCTCGAACAGGGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACTGCATCTTGGACTTCCTTTGGATAAGCTCATGTTATCCATAAAAAATCTTGTTGAGGAAGGCGCCATTTATGAAGCCATAGCTGATCATTACAAGTCAATTATCAATGGTTGA 459 0.4118 MYVRLHGHLKGFQGKRNLNVFSFRLLSDFNEMASHFIDCICAHLYNTRIRNSVPNQQSMNNSLPINPTRGYQAAPSNQFSGQHKGQKSVEDMVLEILRLPSNRAKEEGVSRDLIALHLGLPLDKLMLSIKNLVEEGAIYEAIADHYKSIING 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00020 152 Gene3D - 80 150 IPR036388 -
Pral4507g00020 152 Gene3D - 1 50 IPR012340 -
Pral4507g00020 152 MobiDBLite consensus disorder prediction 56 84 - -
Pral4507g00020 152 SUPERFAMILY "Winged helix" DNA-binding domain 85 148 IPR036390 -
Pral4507g00020 152 Pfam Replication protein A C terminal 43 144 IPR014892 -
Pral4507g00020 152 SUPERFAMILY Nucleic acid-binding proteins 1 48 IPR012340 -
Pral4507g00020 152 PANTHER REPLICATION PROTEIN A-RELATED 1 149 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00020 Pral-Chr4507 188993 193141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00020 1 100 Core DNA Replication Machinery Family AT3G02920 45.370 6.49e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4507g00020 K10739 - qsa:O6P43_022320 199.904