Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00013 ATGATGGGACTAGAAGAGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGAACTTAAATGTATTCTCTTTTAGGCTTTTGAGCGACTTTAACGAGATGGCAAGTCACTTCATCGATTGTATATGCGCTCATCTCTATAATACCAGGATACGGAATAGTGTGCCGAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACAAGAGGTTATCAAGCTGCCCCTTCAAATCAATTCTCTGGTCAGCACAAAGGTCAGAAGAGTGTTGAAGATATGGTCTTGGAGATCTTGCGTCTTCCCTCGAACAGGGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACTGCATCTTGGACTTCCTTTGGATAAGCTCATGTTATCCATAAAAAATCTTGTTGAGGAAGGCGCCATTTATGAAGCCATAGCTGATCATTACAAGTCAATTATCAATGGTTGA 483 0.4141 MMGLEEDGMYVRLHGHLKGFQGKRNLNVFSFRLLSDFNEMASHFIDCICAHLYNTRIRNSVPNQQSMNNSLPINPTRGYQAAPSNQFSGQHKGQKSVEDMVLEILRLPSNRAKEEGVSRDLIALHLGLPLDKLMLSIKNLVEEGAIYEAIADHYKSIING 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00013 160 Pfam Replication protein A C terminal 51 152 IPR014892 -
Pral4507g00013 160 SUPERFAMILY Nucleic acid-binding proteins 6 56 IPR012340 -
Pral4507g00013 160 MobiDBLite consensus disorder prediction 64 92 - -
Pral4507g00013 160 SUPERFAMILY "Winged helix" DNA-binding domain 93 156 IPR036390 -
Pral4507g00013 160 PANTHER REPLICATION PROTEIN A-RELATED 6 157 IPR040260 -
Pral4507g00013 160 Gene3D - 4 58 IPR012340 -
Pral4507g00013 160 Gene3D - 88 158 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00013 Pral-Chr4507 188989 193141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00013 8 108 Core DNA Replication Machinery Family AT3G02920 45.872 6.82e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4507g00013 K10739 - qsa:O6P43_022320 204.527