Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00011 ATGATGGGACTAGAAGAGCTCCAGGAAGATGTAGACACCAATGAAGCGGAGGGTCTCAGGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGAACTTAAATGTATTCTCTTTTAGGCTTTTGAGCGACTTTAACGAGATGGCAAGTCACTTCATCGATTGTATATGCGCTCATCTCTATAATACCAGGATACGGAATAGTGTGCCGAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACAAGAGGTTATCAAGCTGCCCCTTCAAATCAATTCTCTGGTCAGCACAAAGGTCAGAAGAGTGTTGAAGATATGGTCTTGGAGATCTTGCGTCTTCCCTCGAACAGGGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACTGCATCTTGGACTTCCTTTGGATAAGCTCATGTTATCCATAAAAAATCTTGTTGAGGAAGGCGCCATTTATGAAGCCATAGCTGATCATTACAAGTCAATTATCAATGGTTGA 525 0.4248 MMGLEELQEDVDTNEAEGLRDGMYVRLHGHLKGFQGKRNLNVFSFRLLSDFNEMASHFIDCICAHLYNTRIRNSVPNQQSMNNSLPINPTRGYQAAPSNQFSGQHKGQKSVEDMVLEILRLPSNRAKEEGVSRDLIALHLGLPLDKLMLSIKNLVEEGAIYEAIADHYKSIING 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00011 174 Pfam Replication protein A C terminal 65 166 IPR014892 -
Pral4507g00011 174 Gene3D - 102 172 IPR036388 -
Pral4507g00011 174 PANTHER REPLICATION PROTEIN A-RELATED 10 171 IPR040260 -
Pral4507g00011 174 MobiDBLite consensus disorder prediction 78 105 - -
Pral4507g00011 174 SUPERFAMILY Nucleic acid-binding proteins 9 70 IPR012340 -
Pral4507g00011 174 Gene3D - 5 72 IPR012340 -
Pral4507g00011 174 SUPERFAMILY "Winged helix" DNA-binding domain 107 170 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00011 Pral-Chr4507 188986 193141 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00011 12 122 Core DNA Replication Machinery Family AT3G02920 44.538 3.91e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4507g00011 K10739 - qsa:O6P43_022320 221.09