Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00010 ATGGAGCTTCGCAGAGCACAGGGTCAAGTAGTTCTGCCTGTGTTCTATGGCGTGGATCCGTCAGAAGTTCGCAATCAAGGCTCAAGTTTAAGAGAAGCGTTTCGAGATCTTATACAAAGAAGTTCACCCACAGAACATGAAGTGTCGAGGTGGAGGACAGATCTCCGTGAAGCTGGCGGCATTGCCGGATTTGTTGTGCTCAATTCCAAGAATGAAAGTGAGGATATCAAAAATATTGTTGAGCATGTTTGTAAAATATTGGACAAGAAAGACTTGTTTATTGCTAACCATCCTGTGGGAGTGGACTCTCGTTTGCAAGATTTGATTGAAGAATCAAAAAGACATTCAATAAATGATGTTCTCCTGCTAGGGATATGGGGGATGGGCGGCGAGGGTAAAACAACCATTGCCAAAGGCATCTATAATAAAATTGGTCGAACATTTGAGAGCAGAAGTTTTCTTTCAAACATTAGGGAAGTTTGGGGGCGAGATAATGGTCCAGTTAACTTACAGCAACAGCTTCTTTCAGAAATCTGTAAAACGACAATGATGGAAATACGTAGCATTGATTCAGGGAAAATCATATTAAAGGAATCTCTTTGCCATAAGAGAGCACTTGTTGTACTTGATGATGTGAATGAGGATGGGCAACTGAATGCTTTAGTTGGAAGTCGTGAATGGTTTGGTCCTGGAAGCAGGATCATCATCACTACAAGAGATAAGCGTCCGCTCGACCTTCTTAAAGTGGATCATGTACATAAAATAAGGAACATGGACAAAAGTGAATCTATTAAGCTTTTTAGTTGGCATGCATTTAAGCAACCACGTCCTAAAAAAGGATTCATTGACCTTTCGAGAAATATAGTTGCTTATTGTGGAGGACTACCACTAGCCCTTGAAATCCTTGGCTCCTATTTATTTGATAGGGAAGAGAAAGTGTGGAGAAGTGTACTGGAGAAACTAAAAAGAATCCCCAATGGTGAGATACAAAAGAAGCTAAAAATAAGCTTTGATGGTTTAAGTGATGATATGATGAAAGAAATCTTCCTTGATATATCTTGTTTCTTTATTGGGATGGATAGGGGTGATGTGACACAGATATTGGATGGTAGCGGACTTTTTCCAGACATTGGAATAAGTGTCCTTGTGGAGCGGAGCCTTGTAACTATTGATGAGAATAACAAGCTTGGCATGCATGATTTGCTGCAAGACATGGGGAGAGAGGTAGTTCGAGAACAGTCACCAAAAGAGCTTGGAAAGCGTAGTAGGTTATGGTTTCATGAAGATGTGCTCAATGTATTATCAAAGCATACTGGTACAGAAGTGGTTGAGGGGCTAGCTTTGAATTTGTCACAAACCGATAAATATCGTTTTTCTACCGAAGCATTTAAGAAGATGAAGACCCTCCGATTGCTCCGCCTTGATAATGTGAAACTTCATGGAGACTATAAATACATTAGTAGAGATGTCAGATGGCTTTCTTGGCGTGGCTTTCCTTTGAAATACATCCCTGCCAACCTTTATCAGAAAAATTTAGTTGCTATTGAGTTAAAGTACAGTAGCCTTAGGCAAGTCTGGAGAGAGCCCCAGTTATTGGAGAGGCTAAAGATCCTCAATTGTAGTCACTCCCCTTTCTTGATGCAGACTCCTGATTTCTCCAAACTACCAAATCTTGAAAAGTTGATACTTAAAAATTGTCCAAATTTGGCCATGGTTCATCCTACCGTCGGGCATGCCAATAAACTCCTTTTAATTAACTTGAAGGATTGTACTAGCCTTCACACTCTCCCAAAAAGTATTTATAGTTTGAAATCACTAAAAACACTTATTCTGTCTAGTTGTGCAAGCATTGAAAGGTTAGAAGAAGATATAGAGCAAATGGATTCCTTGACAACTCTGATTGCTGATGACACCGCTATAACACAAGTGCCCTTTTCTTTAGTGAGGTTAAAAAGTGTTGGATATGTATCTCTTTGTGGTTTCAGGGGATTATCACGTGATGTGTTTCCTTCTCTCATTTGGTCGAGGATGTCCCCAACAAATAATCCTTTATCTCTTATTCCATCATATGTGGGCATGCCAATTTCCTCGGATATATTGAATGGCAATATCCCTGGTCTTTCATCTGTGTGTAATAACCCTGAAAAGCTACGAAGCCTTTTGTTGGGAATCAGATCAGAGAATGACCCTGAAGTAATTCGAGGTGCTGCAAAAATTTGTGAGTCGTTTCATGCCAGAATTTGCATGGACATGACAACAATACCAAATACTTCAAAAATCTTTGAGGTTGAAAAAGAAAACCACTCTGCACTACAGGCAAGAGTCACTGACTTCATTTGA 2340 0.3991 MELRRAQGQVVLPVFYGVDPSEVRNQGSSLREAFRDLIQRSSPTEHEVSRWRTDLREAGGIAGFVVLNSKNESEDIKNIVEHVCKILDKKDLFIANHPVGVDSRLQDLIEESKRHSINDVLLLGIWGMGGEGKTTIAKGIYNKIGRTFESRSFLSNIREVWGRDNGPVNLQQQLLSEICKTTMMEIRSIDSGKIILKESLCHKRALVVLDDVNEDGQLNALVGSREWFGPGSRIIITTRDKRPLDLLKVDHVHKIRNMDKSESIKLFSWHAFKQPRPKKGFIDLSRNIVAYCGGLPLALEILGSYLFDREEKVWRSVLEKLKRIPNGEIQKKLKISFDGLSDDMMKEIFLDISCFFIGMDRGDVTQILDGSGLFPDIGISVLVERSLVTIDENNKLGMHDLLQDMGREVVREQSPKELGKRSRLWFHEDVLNVLSKHTGTEVVEGLALNLSQTDKYRFSTEAFKKMKTLRLLRLDNVKLHGDYKYISRDVRWLSWRGFPLKYIPANLYQKNLVAIELKYSSLRQVWREPQLLERLKILNCSHSPFLMQTPDFSKLPNLEKLILKNCPNLAMVHPTVGHANKLLLINLKDCTSLHTLPKSIYSLKSLKTLILSSCASIERLEEDIEQMDSLTTLIADDTAITQVPFSLVRLKSVGYVSLCGFRGLSRDVFPSLIWSRMSPTNNPLSLIPSYVGMPISSDILNGNIPGLSSVCNNPEKLRSLLLGIRSENDPEVIRGAAKICESFHARICMDMTTIPNTSKIFEVEKENHSALQARVTDFI 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00010 779 PRINTS Disease resistance protein signature 122 137 - -
Pral4507g00010 779 PRINTS Disease resistance protein signature 601 617 - -
Pral4507g00010 779 PRINTS Disease resistance protein signature 292 306 - -
Pral4507g00010 779 PRINTS Disease resistance protein signature 199 213 - -
Pral4507g00010 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 664 IPR044974 GO:0006952
Pral4507g00010 779 SUPERFAMILY L domain-like 411 722 - -
Pral4507g00010 779 Gene3D - 1 85 IPR035897 -
Pral4507g00010 779 Gene3D Ribonuclease Inhibitor 432 728 IPR032675 -
Pral4507g00010 779 Pfam NB-ARC domain 118 333 IPR002182 GO:0043531
Pral4507g00010 779 SUPERFAMILY "Winged helix" DNA-binding domain 328 434 IPR036390 -
Pral4507g00010 779 Gene3D - 86 252 IPR027417 -
Pral4507g00010 779 ProSiteProfiles TIR domain profile. 1 87 IPR000157 GO:0007165
Pral4507g00010 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 352 IPR027417 -
Pral4507g00010 779 Gene3D - 257 341 IPR042197 -
Pral4507g00010 779 Pfam TIR domain 2 85 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00010 Pral-Chr4507 181330 186690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00010 1 650 WRKY Transcription Factor Family AT4G12020 31.940 3.17e-82 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4507g00010 - - pcin:129288835 1239.94