Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00006 ATGGCGTCTTGTTTGGCTTCTGCGTCTTCCAAATTCAAATACGACGTCTTCTTAACTCTGAGAGATCCCAAGGGTTGTATGAAAGGCTATGTTGAGAATAAATTGAGAGTTGCTGGAACCAGAGTTTTCGTTGACGATGAAGAAGAAGCGTTTTCTGTACAAGAGGCCGAAGCCGCATTAGGATCACGGATCGTTGTTGTTTTATTCACGCCGGAGTTTCTTGAGTCGGAGAAGTGTCTCAAGAGACTGGTGATCAGAACTATGTGGTGGAATAACAACCTAGTGCCTGCATTCTGCGGAGTGAGCCGGCAGCAAGTACATGAGAAGATGCTGTCTTTGTCTTCCAGATTTGATTTCACCGAAGTTGCTTCCCGACCTGGCTTCAAACTCTCCATTGACTCCAGGAATGAAATCAGTAGCCGCATCTCAAACTTAGGTTTTTCCATCTTGCACGATGAATCATTTCATGATCTTCCATGCCATCAAATAGGGTTACCACTTCGTGTGAGAGAATTGCTTACTTTTTTGGGGTTGAAATTCATTTTATCGGATGATACAACCATAGTTGGAATGTGGGGAGATGGAGGTATTGGTAAAACAACGATTGCCAAAGCTATTTATGATAGAATTGGCAGCAATTTTGAGGGTAAAAGTTTCCTTTCAAATATTAAGGATGTATGGAAGAAAGGAAACGGTGAAATTCTCCTAAAAAATCAACTTATTTCATATATTTCTGAAACTAAACTTCATGAGACAAATGATGCTGTGATGCATGAATTAATGATGCAAGAACTCTGTGGAAGAAGAGTCTTCGTAGTACTTGATGATATAAATTGTGAATCTCAACTCAAGGAATTGTGCGGAAATGTGAAGTGGTGTGGTAAAGGGAGCTTGATATTCATTACAGCAAGAAATAAGGCTGTCTTAGATGCCTCTGTTGACATATCATATGAAATGAAAAGGTTAAACAGAAACGAGTCTCTTGAACTTTTTTGCTTGCATGCATTTAAGCAATTTACTCCAACAAATGATTTTGAGGAGTTTTCAAAGCGAGTCATTCAATACTGTGAAGGACTACCCTTGGCTCTTGAAGTCTTTGGCTCTCTTTTGCATAATAGGACAAAAAAAAGAGTGGGAAAAAGTGATGAATGA 1152 0.395 MASCLASASSKFKYDVFLTLRDPKGCMKGYVENKLRVAGTRVFVDDEEEAFSVQEAEAALGSRIVVVLFTPEFLESEKCLKRLVIRTMWWNNNLVPAFCGVSRQQVHEKMLSLSSRFDFTEVASRPGFKLSIDSRNEISSRISNLGFSILHDESFHDLPCHQIGLPLRVRELLTFLGLKFILSDDTTIVGMWGDGGIGKTTIAKAIYDRIGSNFEGKSFLSNIKDVWKKGNGEILLKNQLISYISETKLHETNDAVMHELMMQELCGRRVFVVLDDINCESQLKELCGNVKWCGKGSLIFITARNKAVLDASVDISYEMKRLNRNESLELFCLHAFKQFTPTNDFEEFSKRVIQYCEGLPLALEVFGSLLHNRTKKRVGKSDE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00006 383 PRINTS Disease resistance protein signature 188 203 - -
Pral4507g00006 383 PRINTS Disease resistance protein signature 264 278 - -
Pral4507g00006 383 PRINTS Disease resistance protein signature 356 370 - -
Pral4507g00006 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 375 IPR027417 -
Pral4507g00006 383 Gene3D - 6 145 IPR035897 -
Pral4507g00006 383 Gene3D - 169 315 IPR027417 -
Pral4507g00006 383 Pfam NB-ARC domain 184 373 IPR002182 GO:0043531
Pral4507g00006 383 Gene3D - 321 381 IPR042197 -
Pral4507g00006 383 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 375 IPR044974 GO:0006952
Pral4507g00006 383 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 121 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00006 Pral-Chr4507 125605 131714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00006 185 375 WRKY Transcription Factor Family AT5G45050 32.292 3.33e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4507g00006 - - pcin:129288830 330.487