Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00003 ATGGAGAAGGTGAGAGAAAGTATTCTTACCATTGACACATGGAAATTCAATGGCCCATGTTCCCTTGAGTCTAGTGTTTGCTTAATAGAGCAAATTGCACCATCTGGTTCCTTAAGTTCAATCGTTTGCTTAAATGTTCACAAGAACGAAAGTGAGGATATCAAGAATATTGTTGAGCGTGTTTGTGAAATACTGGACAAGAAGGACTTGTTTATTGCTAACTATCCTGTTGGAGAGAACTCTGATATGCAACATTTGGAGAGAATGTCAAAAAGCCATCCGCCAAATGATGTTCTGCTGCTAGGAAAATCAGGGACAGGTAAGTACCGTAGCAAGTACGATGTGTTCTTGAGCTTCAGAGGCGAAGAAACTCGGGCATCTTTCACTTCTCATCTCTACTCCTCTTTAAGCAATGCTGGAATTGTTGTTTTCAAAGATGATGCGGACCTTCCTAGGGGGAATAGTATCTCGATCGATATGTCACTTGGAATTAAATGTTCTACGATTTCAATCATTATCTTCTCCAAAGATTATGCTGGCTCTAGATGGTGCCTCAACGAGCTCTCCAACATCATGGAGCTCCACAGAGTAGAGGGTCGGATTATTTTGCCTGTGTTCTATGGCGTGGATCCGTCCGAAGTTCACAAACAACACTCTAGTTTTGGAAAAGCATTTCGAGATCTTATACATAAAATTTCACCCATAGAGGATGAAGTGTCGAGGTGGAGGACAGATCTCCGTGAAGCTGGGGGCATTACAGGATTTGTCGTGCTCAATTCCAAGAATGAAAGTGAGGATATCAAGAAAATTGTTGAGCATGTTCGTAAAATATTGGACAAGAAAGACTTGTCTATTGCTGAACATCTTGTTAGAGTGGACTCTTCTTTGCAAGATTTGATTAAAATATCAGAAAGCGATTCAATGAATGATGTTCTCCTGCTAGGGATAGGGGGGATTGGGGGCATCGGTAAATCAACTATTGCCAAAGCCTTCTATAATGAAATTGGTCGAACATTTGAGAGCAGATGTTTTCTGTCAAACATTGGGGAAGTTTGGGGGCAAGACAATGGTCCAGTACAGTTACAGCATCAACTTCTTTCAGAAATCTGTAAAACAAAAATGAGCGCAATGCGTAGCATTGATTCAAGAAAAATCATATTGAAGGAACACCTTTGCCATAAGAGAGCACTTCTTGTACTTGATGATGTGAATGAGGTTGAGCAACTAAATGCTTTATTTGGAAGTCGTGAATGCTTTGGTCCAGGAAGCAGAATAATTATCACTTCTAGAGATAAGCAGTTGCTCAAACTCCTTAACGTGGATCATTTATATACAATGAAGAATATGGACCAAAGTGAATCCATTGAGCTTTTTAGTTGGCATGCATTTAAGCAACCATGTCCTAAAACAGGTTTCATTGAACTTTCTAGAAATATAGTTGCTTATTCTGGAGGAGTACCCCTAGTCCTTGAAGTCTTAGGTTCTCATTTATTTGACAGGGAAATGAGAGAGTGGAAAAGTGTACTGCACAAATTAAAAAGAATCCCCAAAGATGAGATACAAAAGAAGCTAAGAATAAGCTTTGATGGTTTAAGTAATGATCTGGTGAAAGAAATCTTCCTTGATATATCTTGCTTCTTTATTGGGATGGATAGGAGTGATGTCACACAGATATTGGATTATTGTGGACTTTTTCCAGACATAGGAATAAGTGACCTTGTGGAGCGGAGCCTTGTAACTGTTGATGAGAAGAACAAGCTTGGCATGCATGGTTTGCTGCGTGATATGGGGAGGGAGATAATCCGAGAACGATCGCCAAAAGAGCTCGGAAAGCGTAGTAGATTATGGTTTCATAAAGATGTGCATGATGTCTTATCAAAACATACTGGTACAGCATTTGTCGAGGGGCTAGCTTTGAACTTGTCGCAAACAGATAAAGACTGTTTCTCTGCCAAAGCATTTGAGGAGATGAAGTCACTCAGATTGCTCCATCTTAGTAATGTGGATATTGATGGAGACTATGGACACATTAGTAGAGATCTCAGATGGCTTAGATGGCATGGCTTTCCTTTGGAATGCATCCCTGCCAATTTTTATCAGAAAAATTTAGTTGCTATCGAGTTAAAGCACAGTAGCCTCAGACAAGTTTGGAGGGAACCCGAGATTTTGGACAAGCTAAAAATCCTCAATTGTAGTCACTCCCCTTACTTGATGCAGACTCCTGACTTCACAAAACTTCCAAATCTTGAAAAGCTAGTCCTTAAAAATTGTCAAAATTTGCGCATGGTTCATACTACCATCGGACGTGCCCACAAACTCCTCCTTATAAACCTGAAGAATTGCACCAGCCTTCGCACTCTCCCAAGAAGTATTTATAATTTAAAATCACTAAAAACTCTTATTCTAGCTGGTTGTGCAATGATTGAAAGGTTAGAAGAAGATATAGAGCAAATGGATTCCTTGACAACTCTGGTTGCTTATGAGACTGCAATAAGACAAGTTCCCTATTCTTTAGTCAGGTTAAAAAATCTTGGATTTATATCTCTCTGTGGCTACAATGGATTGTCAAGGGATGTGTTTCCTTCTCTCATTTGGTCATGGATGTCCCCAGCAAATAATCCGTTATCTCTTATCTCAACATATGGGGGCATGATAATTTCCTCAGACATATTGAAAAGGAAATCTATTTGTGACAACCAATCAAAGCTGCAAGGCCTTTTTTTGAAAATCACATCAGAGAATGACCCTGAACTTACTCGAGGTGCCGCAAAAATTCTGAAGTCCTCCCGTGCCAGAATTTGCATGGACAAGGCAACAAAAATTGCTTGA 2829 0.398 MEKVRESILTIDTWKFNGPCSLESSVCLIEQIAPSGSLSSIVCLNVHKNESEDIKNIVERVCEILDKKDLFIANYPVGENSDMQHLERMSKSHPPNDVLLLGKSGTGKYRSKYDVFLSFRGEETRASFTSHLYSSLSNAGIVVFKDDADLPRGNSISIDMSLGIKCSTISIIIFSKDYAGSRWCLNELSNIMELHRVEGRIILPVFYGVDPSEVHKQHSSFGKAFRDLIHKISPIEDEVSRWRTDLREAGGITGFVVLNSKNESEDIKKIVEHVRKILDKKDLSIAEHLVRVDSSLQDLIKISESDSMNDVLLLGIGGIGGIGKSTIAKAFYNEIGRTFESRCFLSNIGEVWGQDNGPVQLQHQLLSEICKTKMSAMRSIDSRKIILKEHLCHKRALLVLDDVNEVEQLNALFGSRECFGPGSRIIITSRDKQLLKLLNVDHLYTMKNMDQSESIELFSWHAFKQPCPKTGFIELSRNIVAYSGGVPLVLEVLGSHLFDREMREWKSVLHKLKRIPKDEIQKKLRISFDGLSNDLVKEIFLDISCFFIGMDRSDVTQILDYCGLFPDIGISDLVERSLVTVDEKNKLGMHGLLRDMGREIIRERSPKELGKRSRLWFHKDVHDVLSKHTGTAFVEGLALNLSQTDKDCFSAKAFEEMKSLRLLHLSNVDIDGDYGHISRDLRWLRWHGFPLECIPANFYQKNLVAIELKHSSLRQVWREPEILDKLKILNCSHSPYLMQTPDFTKLPNLEKLVLKNCQNLRMVHTTIGRAHKLLLINLKNCTSLRTLPRSIYNLKSLKTLILAGCAMIERLEEDIEQMDSLTTLVAYETAIRQVPYSLVRLKNLGFISLCGYNGLSRDVFPSLIWSWMSPANNPLSLISTYGGMIISSDILKRKSICDNQSKLQGLFLKITSENDPELTRGAAKILKSSRARICMDKATKIA 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00003 942 SMART till_3 112 252 IPR000157 GO:0007165
Pral4507g00003 942 ProSiteProfiles TIR domain profile. 111 278 IPR000157 GO:0007165
Pral4507g00003 942 SUPERFAMILY L domain-like 601 868 - -
Pral4507g00003 942 Gene3D - 448 532 IPR042197 -
Pral4507g00003 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 543 IPR027417 -
Pral4507g00003 942 Pfam NB-ARC domain 305 518 IPR002182 GO:0043531
Pral4507g00003 942 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 113 855 IPR044974 GO:0006952
Pral4507g00003 942 SUPERFAMILY Toll/Interleukin receptor TIR domain 108 254 IPR035897 -
Pral4507g00003 942 Gene3D - 283 442 IPR027417 -
Pral4507g00003 942 PRINTS Disease resistance protein signature 483 497 - -
Pral4507g00003 942 PRINTS Disease resistance protein signature 390 404 - -
Pral4507g00003 942 PRINTS Disease resistance protein signature 313 328 - -
Pral4507g00003 942 PRINTS Disease resistance protein signature 744 760 - -
Pral4507g00003 942 Gene3D - 108 282 IPR035897 -
Pral4507g00003 942 Gene3D Ribonuclease Inhibitor 631 906 IPR032675 -
Pral4507g00003 942 FunFam Disease resistance protein (TIR-NBS-LRR class) 109 280 - -
Pral4507g00003 942 Pfam TIR domain 112 281 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00003 Pral-Chr4507 80646 91100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00003 113 861 WRKY Transcription Factor Family AT4G12020 29.887 8.55e-87 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4507g00003 - - pcin:129288835 1230.7