Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4507g00002 ATGGCATTTGATGAACTTGATCGAATATCTCAGTACATGCAATGGTATTGGAGACATACAAGACGATGGATTCAACGTATCAGTAGTGATACAGGTCGTGCGTCTGACATAGCAGAGGAGCTATACAGGCTTTCAATTAATTCTCGTTCAACATGCCCTAGTTGTGTTGATTATCGAGATAGGGTTGCTCACGACCAGCGTAACATTTTACTTGCACTTAGAGAACAACGTTTTAATGTAAACCCTCAGCCTGCTCCACCAACAATTGAGTTGCCTCGGCCACAAATTCCTCGTGATAGACCAAGCAAGCGACGAGGTGGTTACTTGTCTACCCAACCTATAATTGAAAACGAAAATGCAAGGGAACAGGAACCTCCAATTTTTACTCAGGCTTCTGACATATCACTGTCACCATCATCCCCCTTCATCTCTATCGATCCTACACAACTTGAGTCTCATTACATGGCACCCTCATCATCATCCCCTTCCAACTCAGCCAATCCTTCTCAATTTCAACCATTCATGACTTTATTAGATAATCCTGCATTATTTTCAGCTGAATACAATGCTTCTACTTTTGAACATGGTGGACCATCAAATGAAGCATTTGTCACTCCTCGACAATCTATACATTTAAATGAATCACCCTGGTTTGATTTGAACACGCCAACTACACAAACAAATGAGACATTTGAAGCTCAAGAAATTGACATACAACAACAACGCCCACAACGTATGAGAAGAAGGCCAAGATGTGGTACTGGAAGTCACTATCAGAATGAAAGTGAGGATATCAAGAATATTGTTGAGCACGTTTGTGAAATATTGGACAAGAAAGACTTGTTCGTTGCTAACCATCCTGTAGGAGTAAACTCTCGCGTGCAAGATTCGATCAAAATGTCAAAAAGTCATCCACCAAATGATGTTCTCCTCCTTGGGATCTGGGGGATGGGTGGTATAGGCAAAACAGTAATTGCCAAGGCCATTTACAATGAAATTGGTGGAAATTTTGAGAGCAGAAGTTTTCTTTCAAATATTAGGGAGGTCTGGGAGCAAGATCATGGTCCAGTTTACTTACAACAGCAACTTCTTTCACAAATCTGTAAAACAACAAAGATGATAATACCTTGCATTGAATCAGGAAAAAACATGCTAAAAGAAAGACTTCGCCAAAAGCAAGCACTTGTAGTGCTTGATGATGTGGATAAGGTGGAACAACTAAATGCTTTATCTGGAAGTGTTAAATGGTTTGGTCCAGGAAGTAGAATAATTATCATAACTAGAGATGAACATTTACTAAGATGTCTTAATGTGGATGTGGACCATGTATATAGAGTAAAGAACATGGACGAAAATGAATCTATTGAGCTTTTTAGTTGGCATGCGTTTAGGCAGCCGAGTCCTGGAGAAGGATTTGTTGAACTTTCTAGAAATATAGTTGCTTATTCTGGAGGACTACCACTGGCTCTTGAAATTCTTGGCTGCTATTTGTTTGATAGGGAATTGACAGAGTGGAAGAGTGTACTGGACAAACTAAAAAAAATCCCAAATGGTCATATACAAAAGAAGCTAAAAATAAGCTTTGATGGTTTAAATGATGATACAGAGAGGGAAATATTCCTTGATATATCTTGCTTCTTTATTGGAATGGATAGGAATGATGTCACACAGATATTGAATGCCAGTGGATTTTTTGCGGACATTGGAATTAGTGTCCTTGTGGAGAGAAGCCTCGTGACCATTGATGAGAAGAACAAGCTTGGTATGCATGATTTGTTACGAGATATGGGAAGAGAAATAATCCGTGAAAAGTCACCAAAAGAATTTGGAAAGCATAGCAGGTTGTGGTTTCATAAGGATGTGATCGATGTGTTATCAAAACATATAGGTACAGAATCTGTGGAGGGGCTAGCTTTGAATCTGTCACAAGATGGTAAAGTTTATTTTTTAACCAAAGCATTTAAGAAGATGAAGGCACTCAGACTGCTGCGTCTTGCTAATGTGGAACTTGATGGAGACTATAAATACATTAGTAGAGATCTCAAATGGCTCTGTTGGCACAAATTTCCTTTGAAATACATCCCTGCCAACTTCCTTCAAAATAATTTAGTCGCTATTGAATTAAAATATAGCAGTCTGAGACTCTGGAGGGAACCCCAGTTGTTGGAGAATCTAAAAATCCTCAATCTTAGCCACTCTCCTTACCTGGTGTCTACTCCTGATTTTTCAAAACTACCAAATCTTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTGGCCACGATACATAATACAATAGGCCATCTTGATAAAATTCATCTAATAAATTTGAAGGATTGTACTGGCCTTCGTAGTGTGCCAAGAAGCATTTATAAATTGAAGTGCTTAAAAACTCTCATTCTTTCTGGTTGTTTGATGATCGAAAAGTTAGAGGAGGACATAGAGCAGATGGATTCTTTGTCAACTGTAATCGCAGATGACATAGCAATAACTAAAGTGCCCATTTCTTTGGCGAGCCGGCATGATGCGTTCGTGAGCTTCAGAGGTGATGATACCCGGGCATCTTTCACTTCTCATCTCTTCTCCGCTTTAACCAATGCTGGAATTGTTGCCTTCAAAGATGATACCGACGTTCTTAGGGGGAAGCGTATCTCAACTGAATTGCTATTTGGAATTGAACGTTCTACAATTTTTATCATTATCTTCTCCAAAGATTATGCTGGGTCTAGATGGTGCCTCATCGAGCTCTCCGAAATCATGGAGCTTCACAGAGCACAAGGTCGAGTAGTGTTGCCTGTGTTCTATGGCGTGGATCCATCTGAAGTTCAAAATCAAGTCTCTAGTTTTGGAAAAGCATTTCGAGATCTTATACATAAAATTTCACCCATAGAGGATGAAGTGTCGAGGTGGAGGACAGATCTCCGTGAAGCTGGGGGCATTACAGGATTTGTCGTGCTCAATTCCAAGTAA 2970 0.3963 MAFDELDRISQYMQWYWRHTRRWIQRISSDTGRASDIAEELYRLSINSRSTCPSCVDYRDRVAHDQRNILLALREQRFNVNPQPAPPTIELPRPQIPRDRPSKRRGGYLSTQPIIENENAREQEPPIFTQASDISLSPSSPFISIDPTQLESHYMAPSSSSPSNSANPSQFQPFMTLLDNPALFSAEYNASTFEHGGPSNEAFVTPRQSIHLNESPWFDLNTPTTQTNETFEAQEIDIQQQRPQRMRRRPRCGTGSHYQNESEDIKNIVEHVCEILDKKDLFVANHPVGVNSRVQDSIKMSKSHPPNDVLLLGIWGMGGIGKTVIAKAIYNEIGGNFESRSFLSNIREVWEQDHGPVYLQQQLLSQICKTTKMIIPCIESGKNMLKERLRQKQALVVLDDVDKVEQLNALSGSVKWFGPGSRIIIITRDEHLLRCLNVDVDHVYRVKNMDENESIELFSWHAFRQPSPGEGFVELSRNIVAYSGGLPLALEILGCYLFDRELTEWKSVLDKLKKIPNGHIQKKLKISFDGLNDDTEREIFLDISCFFIGMDRNDVTQILNASGFFADIGISVLVERSLVTIDEKNKLGMHDLLRDMGREIIREKSPKEFGKHSRLWFHKDVIDVLSKHIGTESVEGLALNLSQDGKVYFLTKAFKKMKALRLLRLANVELDGDYKYISRDLKWLCWHKFPLKYIPANFLQNNLVAIELKYSSLRLWREPQLLENLKILNLSHSPYLVSTPDFSKLPNLEKLILKDCPSLATIHNTIGHLDKIHLINLKDCTGLRSVPRSIYKLKCLKTLILSGCLMIEKLEEDIEQMDSLSTVIADDIAITKVPISLASRHDAFVSFRGDDTRASFTSHLFSALTNAGIVAFKDDTDVLRGKRISTELLFGIERSTIFIIIFSKDYAGSRWCLIELSEIMELHRAQGRVVLPVFYGVDPSEVQNQVSSFGKAFRDLIHKISPIEDEVSRWRTDLREAGGITGFVVLNSK 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4507g00002 989 Pfam NB-ARC domain 308 522 IPR002182 GO:0043531
Pral4507g00002 989 SUPERFAMILY L domain-like 602 837 - -
Pral4507g00002 989 SMART till_3 840 980 IPR000157 GO:0007165
Pral4507g00002 989 Gene3D - 836 989 IPR035897 -
Pral4507g00002 989 Pfam TIR domain 841 976 IPR000157 GO:0007165
Pral4507g00002 989 SUPERFAMILY "Winged helix" DNA-binding domain 520 625 IPR036390 -
Pral4507g00002 989 Gene3D - 260 443 IPR027417 -
Pral4507g00002 989 ProSiteProfiles TIR domain profile. 839 989 IPR000157 GO:0007165
Pral4507g00002 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 282 543 IPR027417 -
Pral4507g00002 989 MobiDBLite consensus disorder prediction 81 123 - -
Pral4507g00002 989 MobiDBLite consensus disorder prediction 237 259 - -
Pral4507g00002 989 SUPERFAMILY Toll/Interleukin receptor TIR domain 840 982 IPR035897 -
Pral4507g00002 989 Gene3D Ribonuclease Inhibitor 605 831 IPR032675 -
Pral4507g00002 989 PRINTS Disease resistance protein signature 311 326 - -
Pral4507g00002 989 PRINTS Disease resistance protein signature 720 736 - -
Pral4507g00002 989 PRINTS Disease resistance protein signature 388 402 - -
Pral4507g00002 989 PRINTS Disease resistance protein signature 483 497 - -
Pral4507g00002 989 MobiDBLite consensus disorder prediction 153 173 - -
Pral4507g00002 989 Gene3D - 448 532 IPR042197 -
Pral4507g00002 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 254 820 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4507g00002 Pral-Chr4507 57687 80088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4507g00002 288 808 WRKY Transcription Factor Family AT5G45050 33.636 6.16e-74 264