Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4506g00016 ATGGCGTCGATCCTGATGAAGCTTGGGATATTTTTCTCTGTTCTTTTGTTTCTGTTTTCTCCGTCACAATCTGCAGTTTTTAGCGTAGATCTAGGGTCTGAGTGGGTCAAAGTAGCGGTCGTAAACCTGAAACCTGGGCAGAGTCCAATATCGGTTGCAATCAATGAGATGTCGAAGCGGAAATCTCCGGCCTTGGTGTCATTTAATTCCGGCGATCGTTTACTAGGCGAAGAAGCAGCTGGTCTGGTGGCTCGGTATCCTCAAAACGTCTATTCCCAGATCAGGGACCTGATTGGCAAGCCGTATAATTTCTCTAAGAAGTTTTTGGATTCAATGTATTTGCCATTTGAAATCAAGGAAGATTCGAGGGGCACCGCGAGTGTTATAGTCGACGCTAATGGCACTGAGTATTCTGCTGAGGAATTGGTGGCGATGGTTTTGACCTATGCTGTTAATTTAGCGGAATTCCATTCCAAAATTCCTATCAAAGATGCTGTAATCACAGTACCGCCTTACTTTGGTCAAGCTGAACGAACTGGGTTGCTTCAGGCAGCACAATTGGCAGGAATTAATGTTCTTTCTTTGATAAACGAGCATTCTGGTGCCGCATTACAGTACGGAATTGATAAGGACTTTTCAAATGAGTCAAGGCATGTCATATTCTATGACATGGGTTCAAGCAGTACCTATGCCGCACTTGTGCATTTCTCCGCGTACCCCAGTAAAGAATATGGAAAGACAGTATCGGTTAATCAGTTTCAGGTTAAGGATGTCTATTGGAATCCAGAGCTAGGTGGTCAAGACATGGAATTGCGATTAGTGGAGCACTTTGCCAATGAATTCAACAAGCAAGTTGGTGATGGATTTGATGTGAGAAAATATCCTAAAGCTATGGCTAAATTAAAGAAACAGGTTAAACGAACCAAAGAAATTCTTAGTGCAAACACAGCTGCTCCCATTTCAGTTGAGTCACTCCATGCAGACACAGACTTCAGGAGTACTATTACCCGTGAGAAGTTTGAAGAGCTCTGCGAGGATATCTGGGAAAAATCTCTTTTGCCTGTGAAAGCATTGCTTGACAATTCAGGCTTGGCAGCTGACCAAATATATGCAGTGGAGTTGCTAGGAGGTGCCACCAGAGTTCCCAAATTGCAGGCTAAGCTTCAAGAGTTCTTTGGGAGGAAAGAACTTGACAGACATCTTGATGCCGATGAAGCTATAGTTCTAGGCGCATCACTGTATGCTGCAAATTTAAGCGATGGAATTAAATTGAATCGGAAGCTTGGAATGATTGATGGTTCAATGTATGGATTTGTGGTTGAGTTGAATGGCCCTGATCTTTTGAAAGATGAAAGTACTAGGCAGTTACTTGTACCACGACTGAAAAAAATCCCAAGCAAGATGTTCAGATCAATTATCCATAACAAAGATTTTGAGGTTTCACTAGCTTATGAGAGTGAAAATCTTTTGCCACCTGGCATTACCTCTCCTGAAGTTGCTCAATATCAAGTATCTGGTTTGACAGCTGCAACGGAGAAGTATTCATCTCGGAATTTGTCCTCTCCCATAAAAGCAAACCTGCATTTCTCTTTGAGTAGAAGTGGAATCCTTTCTTTGGATCGGGCAGATGCTGTTATCGAAATAACAGAGTGGGTGGAAGTTCCTAGAAAGAATCTGACCGTAGAGAATTCTACTTCAGATTCTTTGAACTTGACATTGGAAACTGGTGGTAGGAATAGTTCCGAGGAAAACAGTGAAAAGTTACAAACTGATGGGGAGGTTAGCAAGACTTTGAATACAAGTGCAGAGGAGCAACCTGCCACAGATTCTGGTACAGAGAAAAAGTTGAAGAAGCGAACCTTTAGGGTCCCATTGAAGATTGAATCAAAGCTAGTGGGACCTGGAATGTCTCTGTCAAAAGAGTTTCTTGCTCAAGCTAAGGGCAAATTAGAGGCACTGGACAAGAAAGATGCAGAGAGAAGAAGAACAGCAGAACTGAAAAATGACTTAGAAGGATATATATACGCAACTAAGGAAAAGATTGAAACTTTAGAGGATGTTGCAAAAGTTTCTACTGATGATGAACGCCAATTGTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGAGAAGATGCCAATGCTACAGAGTTTGAAGAGCGTCTAGATATGTTAAAAGCAGTAGGTGATCCAATTTTTTTCAGATTGAAGGAGCTTACATCTCGACCAGCAGCAGTTGATCATGCTCGAAAATACCATAACGAGCTGCAACAGATTGTACAACAGTGGAAGACAAATAAGTCTTGGCTTCCAAAGGAAGAAATAGATGAGGTTGTAAAAGATGCTGAAAAGTTTAAGAATTGGTTGGACGAGAAGGAAGCTGAGCAGGCTGAGACTTCTGCGTTTAGCAAGCCAGCATTTACTTCCGATGAAGTATATCTGAAGGTGTTTGATCTGCAAAGCAAGGTTGCCAGGATCAATAGAATCCCCAAACCCAAGCCTAAAATCCAGAAGCCTACAAAGAATGAAACAGAGAGCAAGAACAAAACTGACACTGCAAACTCCACCTCAACAGATAGCTCTCCCCAAAGCGATCAACCAGCAAACGAAAACTCAGAAGCTCATGATGCTCCCCAAAGCGATCAATCAGGGGAGAAAACGGAAAGCTCAAGAAAAGAAGTGGTTGATGAGCAACCTCAAGCTCATGATGAATTATAG 2730 0.422 MASILMKLGIFFSVLLFLFSPSQSAVFSVDLGSEWVKVAVVNLKPGQSPISVAINEMSKRKSPALVSFNSGDRLLGEEAAGLVARYPQNVYSQIRDLIGKPYNFSKKFLDSMYLPFEIKEDSRGTASVIVDANGTEYSAEELVAMVLTYAVNLAEFHSKIPIKDAVITVPPYFGQAERTGLLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGSSSTYAALVHFSAYPSKEYGKTVSVNQFQVKDVYWNPELGGQDMELRLVEHFANEFNKQVGDGFDVRKYPKAMAKLKKQVKRTKEILSANTAAPISVESLHADTDFRSTITREKFEELCEDIWEKSLLPVKALLDNSGLAADQIYAVELLGGATRVPKLQAKLQEFFGRKELDRHLDADEAIVLGASLYAANLSDGIKLNRKLGMIDGSMYGFVVELNGPDLLKDESTRQLLVPRLKKIPSKMFRSIIHNKDFEVSLAYESENLLPPGITSPEVAQYQVSGLTAATEKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTVENSTSDSLNLTLETGGRNSSEENSEKLQTDGEVSKTLNTSAEEQPATDSGTEKKLKKRTFRVPLKIESKLVGPGMSLSKEFLAQAKGKLEALDKKDAERRRTAELKNDLEGYIYATKEKIETLEDVAKVSTDDERQLFVEKLDQVQDWLYTDGEDANATEFEERLDMLKAVGDPIFFRLKELTSRPAAVDHARKYHNELQQIVQQWKTNKSWLPKEEIDEVVKDAEKFKNWLDEKEAEQAETSAFSKPAFTSDEVYLKVFDLQSKVARINRIPKPKPKIQKPTKNETESKNKTDTANSTSTDSSPQSDQPANENSEAHDAPQSDQSGEKTESSRKEVVDEQPQAHDEL 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4506g00016 909 MobiDBLite consensus disorder prediction 832 909 - -
Pral4506g00016 909 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 747 IPR029048 -
Pral4506g00016 909 SUPERFAMILY Actin-like ATPase domain 25 210 IPR043129 -
Pral4506g00016 909 MobiDBLite consensus disorder prediction 591 607 - -
Pral4506g00016 909 MobiDBLite consensus disorder prediction 563 579 - -
Pral4506g00016 909 Gene3D - 29 416 - -
Pral4506g00016 909 FunFam Heat shock 70 kDa protein 4 638 750 - -
Pral4506g00016 909 ProSitePatterns Heat shock hsp70 proteins family signature 3. 372 386 IPR018181 -
Pral4506g00016 909 Gene3D - 638 750 IPR029048 -
Pral4506g00016 909 PANTHER HSC70CB, ISOFORM G-RELATED 24 870 - -
Pral4506g00016 909 Gene3D Actin; Chain A, domain 4 265 350 - -
Pral4506g00016 909 MobiDBLite consensus disorder prediction 853 882 - -
Pral4506g00016 909 Gene3D - 92 145 - -
Pral4506g00016 909 FunFam Heat shock 70 kDa protein 4 265 350 - -
Pral4506g00016 909 CDD HYOU1-like_NBD 28 416 - -
Pral4506g00016 909 PRINTS 70kDa heat shock protein signature 165 185 - -
Pral4506g00016 909 PRINTS 70kDa heat shock protein signature 401 421 - -
Pral4506g00016 909 PRINTS 70kDa heat shock protein signature 25 38 - -
Pral4506g00016 909 PRINTS 70kDa heat shock protein signature 57 69 - -
Pral4506g00016 909 PRINTS 70kDa heat shock protein signature 369 385 - -
Pral4506g00016 909 MobiDBLite consensus disorder prediction 563 615 - -
Pral4506g00016 909 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Pral4506g00016 909 Gene3D - 211 398 - -
Pral4506g00016 909 MobiDBLite consensus disorder prediction 883 909 - -
Pral4506g00016 909 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 630 IPR029047 -
Pral4506g00016 909 SUPERFAMILY Actin-like ATPase domain 216 418 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4506g00016 Pral-Chr4506 161199 169727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4506g00016 22 532 Calmodulin-binding Proteins AT3G12580 29.714 3.34e-67 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4506g00016 K09486 - qsa:O6P43_020668 1344.33