Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4506g00009 ATGCTTCAAAGCTTGGTCCCTCGATCCTCACTTTCTGAGAGTCCAAACGGTACCTCTTCTTCCTCCATGAAGACCAAGCGCGTGGACCGTGACCTCGACGAGGCCGGCGGTGACGGTGATGATCCCTCCTCATTCAAGAGGCAGAGCTCCGGCAGGAATTTCTCTGGTGAGGCATCTGTCTCCGGCGAGAAGACTGTTGAGGAAGGGGAGGGGCGTGAGGATCAGGAGCCACCGTTGGAAGGCACCGAGTCGACGGGTCTCAGACTCCTCGGCTTGTTGCTACAATGCGCGGAGTGCGTCGCCATGGAAAACCTGGATGATGCCAGTGACCTTCTGCCGGAGATAGCGGAGCTTTCCTCGCCGTACGGGACGTCACCCGAACGCGTCGGCGCGTACTTTGCACACGCTCTTCAGGCGCGCGTCGTCAGCTCATGCCTCGGCACTTACTCGCCTCTCACCACGAAATCGCACACTCTTGTTCAGTCCCAGCGAATCTTTAGCGCCTTCCAATCCTACAACTCTGCCTCTCCCCTCGTCAAATTCTCGCACTTCACCGCCAACCAAGCCATCTTCCAGGCCCTCGACGGCGAAGATTGCGTCCACGTCATCGACCTGGACATCATGCAAGGCCTTCAATGGCCAGGATTGTTCCACATCCTCGCCTCCCGCTCGAAGAAGATCCGATCAATGAGGATAACCGGGTTCGGATCCTCCGCCGAGTTGCTCGAGTCCACCGGCCGGCGACTGGCCGACTTCGCAAGCTCACTCGGCTTGCCGTTCCAGTTCCACCCTGTGGAGGGCAAAATCGGGAACATAACCGACCTGAGTCAACTCGGAGTGAAGCCCAACGAGGCCATAGTGGTCCATTGGATGCACCATTGCTTGTACGATATCACCGGAAGCGATTTGGGGACGTTGAGACTGTTGACTCTGTTGAGGCCGAAGCTTATAACGACGGTCGAACAGGATCTGAGTCACGCCGGGACCTTCCTCGCGAGGTTCGTGGACGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGATTGAGCGAGGACAGCACAGAGAGGCATACGGTGGAGCAGCAGCTGTTTGGGTGCGAGATAAGGAACATCGTGGCTGTTGGTGGGCCCAAGAGGACCGGCGAAGTGAAGGTCGAAAGATGGGGCGATGAGCTGAGACGGGTCGGGTTCCGACCGGTGTCTCTACGGGGCAACCCGGCTTCCCAAGCGAGCCTCTTGCTGGGTATGTACCCTTGGAGAGGGTACACTCTAGTGGAAGAGAATGGGTGTCTCAAGTTGGGGTGGAAGGATCTTTCTCTTTTGACTGCATCTGCATGGCAACCGTCAAATTAG 1362 0.5771 MLQSLVPRSSLSESPNGTSSSSMKTKRVDRDLDEAGGDGDDPSSFKRQSSGRNFSGEASVSGEKTVEEGEGREDQEPPLEGTESTGLRLLGLLLQCAECVAMENLDDASDLLPEIAELSSPYGTSPERVGAYFAHALQARVVSSCLGTYSPLTTKSHTLVQSQRIFSAFQSYNSASPLVKFSHFTANQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSAELLESTGRRLADFASSLGLPFQFHPVEGKIGNITDLSQLGVKPNEAIVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITTVEQDLSHAGTFLARFVDALHYYSALFDALGDGLSEDSTERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRVGFRPVSLRGNPASQASLLLGMYPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4506g00009 453 MobiDBLite consensus disorder prediction 63 79 - -
Pral4506g00009 453 ProSiteProfiles GRAS family profile. 80 450 IPR005202 -
Pral4506g00009 453 MobiDBLite consensus disorder prediction 24 41 - -
Pral4506g00009 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 445 IPR005202 -
Pral4506g00009 453 MobiDBLite consensus disorder prediction 1 23 - -
Pral4506g00009 453 Pfam GRAS domain family 91 450 IPR005202 -
Pral4506g00009 453 MobiDBLite consensus disorder prediction 43 60 - -
Pral4506g00009 453 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4506g00009 Pral-Chr4506 111037 112869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4506g00009 23 450 GRAS Transcription Factor Family AT5G41920 64.733 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4506g00009 GRAS 5.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4506g00009 - - qsa:O6P43_019532 711.449