Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4506g00001 ATGGCTTATGGTCAAACAGGTACTGGTAAAACTTACACGGTTGGAACATTGGGTAAAGACGATGCCTCAGAGCGTGGCATTATGGTTAGAGCTTTGGAAGACATAATTGCCAACACATCCGCATCTGATAGTGTTGAAGTTTCCTATTTACAGTTGTATATGGAGTCCATACATGATTTACTTGCTCGAGAAAGTGACATTTCTATACATGAAGACCCAAAGAGCGGTGAAGTGTCATTACCTGGTGTTGAAGTGGTTAAAGTTCAAGATCTTGATAGTTTCATGCAGTTACTTGAACTAGGTGAGGTAAATCGCCATGTAGCTAACACAAAGCTGAACACAGAATCCTCTCGGAGTCATGTGATTCTTATGGTTCAAATTCGCAGATCTATTCTTGGGAAAAAGGTAGAGGACACTACTTGTCAAGATAAAAGCATCAGCAATGATCTTTATGTTGACAACAAGAAACCTATGATTCAGAAGAGCAAGTTGCTAATTGTGGATCTTGCAGGATCTGAAAGGATAGACAAATCTGGAAGTGAAGGGCACTTGCTTGAAGAGGCTAAATTCATTAATCTTTCTCTCACTTCACTTGGAAAATGCATAAATGCATTGGCCGAAAAAAGCCCGCACATACCAACAAGAGAGTCCAAGCTTACAAGGCTACTTCGCGATTCATTTGGAGGGTCTTCAAGGACTTTCTCTATTATAACAATTGGGCCTTCTGTGAAGTGCCATGCAGAGACTTCTGGCACAGTAATGTTCGGACAGCGAGCAATGAAGATTGTGAACAAGGTAAAGCTCAGAGAAGAAGTTGATTATGAAGCTTTATGCCGTAAACTTGAAAATCAAGTGGACCTTCTTACTGCAGAAGTTGAAAGGCAACAGAAGTTGAGAGAAAATGAAAGACACATGTTGGACAAGCAGCTCAAAGAATGCCAAGGTGCTTTAATTGAAACAAAGAAAAGTCTGCTTACAAGGTCTGAGTTTCTACAAAAGGAAAACATGGATTTGAAAGGGGAATTAAAGGACATTTTAAGCGAACTTAAATGTCAGAAAGATCAAAATTGTTCGTTGCATGAAGTGGCTGCAAATCTGGAAAAGAAATATGAGCAACAACTCCGTGAAAATTCTGCAATTCAAGAAGTACTGGCAGAAACCACTCAGATGTATGAGAGGAAAATTGCAGAGTTGATTAAGCAGATTGAAGACAGGCATTCTTGTGATGAACACGCTGCAAAAGAACTAGATACGATACATAAGCTTCTAGATGATCATCAAAAGTCAATTCAGCAAAAAGAACTAGAGAACGCCGCATGTCAAAGGGCTCTGGCTGAAACCACTAAAATGCATGAGAAACAAGTAATGGAGCTAGTTAAACAGATAGAAGATGAGCACCGCCGATTTGAATGTGCACAGGAACAATTAGACTTGGCAAAGGGACTCCTAAGTGATCAGCAAGACTTAGCACAGAAGCAGGGAGAGATTGATGAACTTCGGGCGAGATTACAAGGAATGTCCCATTTACATGATGCTACTACAAATGAACTCCATTTGTTAAAATCAAAATATCAAAATCTATTAGAGAGGGAGGTTACACTGAATGAGGAACTTCATGCCATGAGGCAAAGACTCCTGACAGAAGAGGAGCAGAGAAAAGATGTTGAAAATGAGCTGTTTAAACTTAAGAAGAATGTGTCTGAAACTGAGAATGATATCAAGAAAGCTGTTTTGAAGGAAAGTAGCCAAAATACATTCAATGAAGCTTTGGAGCATGGATCCCCTGTGATGTCAAACAAGATTAAACCATCAAAGGAGACAATCTCTAGTCAGAAGGCTGCCATTGCAAAGATATGCAAAGAAGTGGGGTTTCAAAGAATATTAGAGTTATTGAAGTCTGAGGACTCGGATACCCAAATCCAAGCTCTAAAGGTGATAGCCAATCTGGCTGCTGAAGATATTAATCAGGAAAAAATTGTTGAAGAAGGAGGACTCGATGCATTGCTTACATTAATGGAATTATCGCAAAATTCAACAATTCTTCGAGTGGCTTCTGGGGCTATTGCCAATTTGGCTATGAATGAGCTTAGTCAAGGTTTAATAGTGAGCAAAGGAGGTGCGAGGCTACTAGCGACGATAGCTTCAACAGTGGTTGATCCACAGACCCTAAGGATGGTTGCCGGGGCACTTGCTAATTTATGTGGAAATGAGAGGTTACATATGCTGCTGAACGAAGATGGAGGTATCAAAGCACTTGTGGAAATGGTCAGATGTGGGAATATTGATGTCATTGCGCAGGTTGCTAGGGGATTGGCTAACTTTGCAAAATGTGAATTTAGAGGAAGAGTTCAAGGACAAGCAAAAGGCTGCTCACTATTAATGGAATATGATGCTCTTTCATGGTTGATTGCCAACTCTAGTACCTCTTCAGCTTCAACCCGGCGACACATTGAGCTTGCTTTATGTCATCTGGCACAAAATGAGGACAATGCCAAGGAGTTCATTTCCAAAGGTGGAGTGAAAGAGCTGGTTCGAATATCAGTACAGTCCACCAGAGAAGATATTCGAAATTTTGCACAACGAATACTCAGCTCAAATCCGATGTTTCGGGCAGAGATGAATGAACAACAGATTTATTATACATAA 2646 0.4036 MAYGQTGTGKTYTVGTLGKDDASERGIMVRALEDIIANTSASDSVEVSYLQLYMESIHDLLAPXESDISIHEDPKSGEVSLPGVEVVKVQDLDSFMQLLELGEVNRHVANTKLNTESSRSHVILMVQIRRSILGKKVEDTTCQDKSISNDLYVDNKKPMIQKSKLLIVDLAGSERIDKSGSEGHLLEEAKFINLSLTSLGKCINALAEKSPHIPTRESKLTRLLRDSFGGSSRTFSIITIGPSVKCHAETSGTVMFGQRAMKIVNKVKLREEVDYEALCRKLENQVDLLTAEVERQQKLRENERHMLDKQLKECQGALIETKKSLLTRSEFLQKENMDLKGELKDILSELKCQKDQNCSLHEVAANLEKKYEQQLRENSAIQEVLAETTQMYERKIAELIKQIEDRHSCDEHAAKELDTIHKLLDDHQKSIQQKELENAACQRALAETTKMHEKQVMELVKQIEDEHRRFECAQEQLDLAKGLLSDQQDLAQKQGEIDELRARLQGMSHLHDATTNELHLLKSKYQNLLEREVTLNEELHAMRQRLLTEEEQRKDVENELFKLKKNVSETENDIKKAVLKESSQNTFNEALEHGSPVMSNKIKPSKETISSQKAAIAKICKEVGFQRILELLKSEDSDTQIQALKVIANLAAEDINQEKIVEEGGLDALLTLMELSQNSTILRVASGAIANLAMNELSQGLIVSKGGARLLATIASTVVDPQTLRMVAGALANLCGNERLHMLLNEDGGIKALVEMVRCGNIDVIAQVARGLANFAKCEFRGRVQGQAKGCSLLMEYDALSWLIANSSTSSASTRRHIELALCHLAQNEDNAKEFISKGGVKELVRISVQSTREDIRNFAQRILSSNPMFRAEMNEQQIYYT 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4506g00001 882 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 623 665 IPR000225 GO:0005515
Pral4506g00001 882 Gene3D - 606 879 IPR011989 -
Pral4506g00001 882 Pfam Armadillo/beta-catenin-like repeat 656 693 IPR000225 GO:0005515
Pral4506g00001 882 Gene3D Kinesin motor domain 1 292 IPR036961 -
Pral4506g00001 882 SMART arm_5 737 777 IPR000225 GO:0005515
Pral4506g00001 882 SMART arm_5 695 736 IPR000225 GO:0005515
Pral4506g00001 882 SMART arm_5 653 694 IPR000225 GO:0005515
Pral4506g00001 882 SMART arm_5 611 652 IPR000225 GO:0005515
Pral4506g00001 882 Coils Coil 329 356 - -
Pral4506g00001 882 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 664 707 IPR000225 GO:0005515
Pral4506g00001 882 ProSiteProfiles Kinesin motor domain profile. 1 263 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4506g00001 882 PANTHER KINESIN-LIKE PROTEIN KIF11 1 777 IPR047149 -
Pral4506g00001 882 PRINTS Kinesin heavy chain signature 213 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4506g00001 882 PRINTS Kinesin heavy chain signature 111 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4506g00001 882 Coils Coil 483 580 - -
Pral4506g00001 882 SMART kinesin_4 1 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4506g00001 882 Pfam Kinesin motor domain 1 263 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4506g00001 882 SUPERFAMILY ARM repeat 610 865 IPR016024 -
Pral4506g00001 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 301 IPR027417 -
Pral4506g00001 882 Coils Coil 456 476 - -
Pral4506g00001 882 Coils Coil 272 299 - -
Pral4506g00001 882 ProSitePatterns Kinesin motor domain signature. 163 174 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral4506g00001 882 Coils Coil 364 384 - -
Pral4506g00001 882 Coils Coil 424 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4506g00001 Pral-Chr4506 2022 16150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4506g00001 1 265 Calmodulin-binding Proteins AT5G65930 36.496 7.94e-37 148