Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4504g00011 ATGGCCATCATGGGACCTTCTGGTTCTGGCAAATCCACTCTTCTTGATGCTTTGGCAGGTAGGCTTCCTGGAAATGTTGTCATGACAGGGAAAGTGCTTTTAAATGGAAAGAAGATAGTAGACCATGGAGTTAAAGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTAACAGTGAGAGAGACAATATCTTACTCAGCAAAACTTAGGCTTCCAAGCACAATGACAAAAGAAGAAGTTAATGACATAGTGGAAGGAACAATTATGGAAATGGGTCTTCAACAATGTGCTGATAGGCCAATTGGGAATTGGCACTTAAGAGGAATAAGTGGTGGGGAAAAGAAAAGACTAAGCATAGCACTTGAAATCCTCACAAGACCTTCCCTTTTGTTTCTTGATGAGCCAACCAGTGGTTTGGATAGTGCCTCCGCATTTTTTGTTGTTCAAACTCTGAGAAATATTGCTCATGATGGAAGAACTGTTATTTCCTCCATACATCAACCTAGCAGTGAAGTTTTTGCACTCTTTGATGATCTTTTTCTCCTCTCTGGTGGTCAAACAGTGTTTTTCGGAGCAGCTAAAATGGCAGTTGAGTTCTTCGCCAAAGCAGGATTTCCATGTCCAAGTAGAAGAAATCCATCAGATCACTTCCTTCGTTGTATCAATGCAGATTTTGACACAGTCACATTGGCTATGGTGGCTTCTCAGAAAATGCCTGAACAAGATAACTTATCAACTGCAGAAATAAAGGCAATACTTGTTGAGAAATACCAATGGTCAGAATATGCCTCCACAGCAAGATCAAGAATAAAGCAAATCTCCACCACTGGACAAGGAGAGAGTGAAAGTAAAAGCAAAAACCAAACCAAATGGTGGAAGCAGCTTTCAACATTGACTCAGAGGTCTTTTGTGAACATGAGTAGAGATGCCGGATACTACTGGATAAGGATAATAATCTATGTGGCCTTATCTTTGTGTGTTGGAATGGTATTTTTCAATGTTGGGACAAGTTACAGAGCAATTTTTGCCAGAGGATCTTGTGGAGCATTCATATCTGGTTTCATGACATTCATGTCCATTGGAGGCTTCCCATCTTTCATAGAAGAGATGAAGGTGTTTAAGAAAGAGAGGCTGAATGGGTATTATGGAAATGGAATCTATGTTCTCTCAAACTTTCTGTCTTCCCTTCCTTTCGTGATAATGATGTCTTTTGCAACTGGGATTATAACCTTCTATATGGTTAAGTTTCATCCTGGCTTCTCCCTTCTGCTCTACGGATGCATTGATCTTTGTTTGTGCATTGCTGTTGTGGAGACCGCAATGATGATCATAGCTTCACTTGTTCCAAACTTCCTCATGGGGGTCATCGTCGGAGCAGGATATGTTGGTGTTATGATGATGACTTCTGGATACTTTCGTCAGCGTCCTGATCTTCCCAAAGTCTTCTGGCGTTATCCAATCCTATACATCAATTTTGGGGCATGGGGATTACAGGGGGCTTACAAGAACGACATGATAGGGCTGGAGTTTGAAGCTATGAATCCAGGAGAGCCAAAACTGAAAGGAGAGTTCATCCTGAGAACCATGCTTGGCCTTGAACTTGATCATTCAAAATGGTGGGACTTAGCTGCAGTGGCACTAATCCTCATATCCTTCAGACTCCTCCTCTTCTTTCTTCTAAAGTTCAGAGAGTTCTCTTCACCTCTGTTTCGTAAAATCTACACCAAGCGAACCCTGCAACGCATCAAGAAACGTCCTTCTTTCAGAAGAGCTGCATCTTTATCTTTCCCTTCCAAGAGACATCACCAACCTCTCCATCCTTTGTCTTCTCAAGAAGGTCTCACCTCCCCAATTCATTAG 1863 0.4181 MAIMGPSGSGKSTLLDALAGRLPGNVVMTGKVLLNGKKIVDHGVKAYVTQEDILLGTLTVRETISYSAKLRLPSTMTKEEVNDIVEGTIMEMGLQQCADRPIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAFFVVQTLRNIAHDGRTVISSIHQPSSEVFALFDDLFLLSGGQTVFFGAAKMAVEFFAKAGFPCPSRRNPSDHFLRCINADFDTVTLAMVASQKMPEQDNLSTAEIKAILVEKYQWSEYASTARSRIKQISTTGQGESESKSKNQTKWWKQLSTLTQRSFVNMSRDAGYYWIRIIIYVALSLCVGMVFFNVGTSYRAIFARGSCGAFISGFMTFMSIGGFPSFIEEMKVFKKERLNGYYGNGIYVLSNFLSSLPFVIMMSFATGIITFYMVKFHPGFSLLLYGCIDLCLCIAVVETAMMIIASLVPNFLMGVIVGAGYVGVMMMTSGYFRQRPDLPKVFWRYPILYINFGAWGLQGAYKNDMIGLEFEAMNPGEPKLKGEFILRTMLGLELDHSKWWDLAAVALILISFRLLLFFLLKFREFSSPLFRKIYTKRTLQRIKKRPSFRRAASLSFPSKRHHQPLHPLSSQEGLTSPIH 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4504g00011 620 MobiDBLite consensus disorder prediction 597 620 - -
Pral4504g00011 620 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 586 - -
Pral4504g00011 620 SMART AAA_5 1 186 IPR003593 GO:0016887
Pral4504g00011 620 ProSitePatterns ABC transporters family signature. 110 124 IPR017871 GO:0005524|GO:0016887
Pral4504g00011 620 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 210 IPR003439 GO:0005524
Pral4504g00011 620 Pfam ABC transporter 1 138 IPR003439 GO:0005524
Pral4504g00011 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 199 IPR027417 -
Pral4504g00011 620 Pfam ABC-2 type transporter 295 504 IPR013525 GO:0016020|GO:0140359
Pral4504g00011 620 CDD ABCG_EPDR 2 192 - -
Pral4504g00011 620 Gene3D - 1 203 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4504g00011 Pral-Chr4504 130903 137589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4504g00011 1 181 Calmodulin-binding Proteins AT2G36910 29.557 4.56e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4504g00011 K05681 - gmx:100806806 956.436