Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4504g00010 ATGGAGATAGAGGATGCGAGTGGTGGCGGGAGATACAATGGGAGTGCGTCCACGGCGGCGGTGTACGGTGGACTTGACAGAGGAAGTTGTTTGGTGTGGGAGGATCTGACGGTGGTGCTTCCCAACTTCGGCAAGGGACCGACCAAGAGGCTGCTTAATGGCCTTAATGGTTACGCCGAGCCTGGTAGAATCATGGCTATAATGGGTCCTTCTGGTTCTGGGAAATCTACCTTGCTCGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTCATGACTGGAAATATATTTCTCAATGGAAAGAAGAAAAGACTAGATTATGGTGAAGTTGCTTATGTAACCCAAGAGGATGTCTTGCTGGGAACTCTCACTGTCAGGGAAACCATATCCTATTCAGCAAATCTACGTCTCCCTACAACAATGACCAAAGAAGAAGTAAATGGGATTGTTGATGGAACAATAATTGAAATGGGTCTCCAGGATTGTGCAGACAGGTTGATTGGTAACTGGCATTTGAGAGGCATCAGTGGAGGAGAGAAGAAAAGACTTAGTATTGCACTTGAAATCCTCACAAGGCCTCGCTTATTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCTGCTTTCTTTGTTGTTCAGACTCTTAGAACTGTTGCTCGTGATGGACGGACAGTTATCTCTTCAATTCACCAGCCAAGTAGTGAAGTGTTTGCTCTCTTTGATGACCTTTTCTTACTATCTGGTGGTGAAACAGTGTATTTTGGAGAAGCAAAGAGGGCTGTAGAGTTCTTTGCAGAAGCAGGATTTCCATGTCCACGAAAAAGAAACCCTTCTGATCACTTCTTACGTTGCATCAATTCTGACTTTGACATTGTAACGGCCGCTTTGAAGGGATCTCAAAGAATTCGGGATATTCCAAATTCATCAGATCCTTTCATGAACATGGCTACAGCAGAGATTAAGGCTGCGCTAGTTGAAAAATATAGGCGTTCAGTTTATGCCAGAAGGACAAAAGAAAGGACTCGAGAACTATCCAACATTGAAGGAATAGAAACTGAAACACAAAGTGGCAGTCAAGCTAGTTGGTGGAAACAGCTTGTAACGTTGACGATGAGATCATTTGTGAACATGAGTAGAGATGTGGGTTACTACTGGTTAAGGATTATAATATATATCATAGTATCTATATGTGTGGGAACTATATACTTTGATATTGGGTATAGCTACACTTCAATCTTGGCTCGTGGGGCATGTGGTGCATTTATATCAGGTTTTATGACATTTATGTCAATTGGAGGTTTCCCATCATTCATTGAAGAAATGAAGGTTTTCTATCGGGAAAGAGTTAATGGATATTATGGAGTTGCAGTATATATTTTGTCCAATTTCCTATCTTCTTTCCCATTCTTGGTTGCAATTGCTCTTACTACTGGCACCATTACTTATAACATGGTGAAATTCCGGCCTGGCTTTGTTCACTTTTTGTTCTTCACTCTCAACATCTTTGGTTGCATAACTGTGATTGAGAGTCTCATGATGGTCGTAGCCTCACTTGTTCCTAATTTCCTCATGGGAATAATTACTGGAGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCCGGTTGCTGGATGATCTTCCAAAGCCAGTTTGGCGCTATCCAATATCGTATCTTAGTTACGGCGCCTGGGCAATACAGGGTGCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGAGCCTATGATACTAGGTGATCCAAAATTGAGGGGTGATTATATTATAACACACATGTTGGGAATGGGACTGAATCATTCCATGTGGTGGGACTTGGGAGCTCTATATATCATTCTTATAGGTTACAGAATTCTTTTCTTCATTGTTCTCAAGTTCAAGGAGAGAGCTTCCCCATTATTTAAGAGACTCCATGCCAAGAGAACATTACAGGCACTTGAAAAGAGGCCTTCTTTCAGGAAGATGCCTTCTTTTCCTTCAAAGAGACATCAACCCCTCCATTCACTGTCTTCTCAAGAAGGCCTTAATTCTCCACTCCACTAG 2070 0.4232 MEIEDASGGGRYNGSASTAAVYGGLDRGSCLVWEDLTVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIFLNGKKKRLDYGEVAYVTQEDVLLGTLTVRETISYSANLRLPTTMTKEEVNGIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRTVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKRAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTAALKGSQRIRDIPNSSDPFMNMATAEIKAALVEKYRRSVYARRTKERTRELSNIEGIETETQSGSQASWWKQLVTLTMRSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERVNGYYGVAVYILSNFLSSFPFLVAIALTTGTITYNMVKFRPGFVHFLFFTLNIFGCITVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLDDLPKPVWRYPISYLSYGAWAIQGAYKNDLLGLEFEPMILGDPKLRGDYIITHMLGMGLNHSMWWDLGALYIILIGYRILFFIVLKFKERASPLFKRLHAKRTLQALEKRPSFRKMPSFPSKRHQPLHSLSSQEGLNSPLH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4504g00010 689 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Pral4504g00010 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 267 IPR027417 -
Pral4504g00010 689 CDD ABCG_EPDR 31 257 - -
Pral4504g00010 689 Gene3D - 28 269 IPR027417 -
Pral4504g00010 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 27 658 - -
Pral4504g00010 689 MobiDBLite consensus disorder prediction 672 689 - -
Pral4504g00010 689 SMART AAA_5 61 232 IPR003593 GO:0016887
Pral4504g00010 689 Pfam ABC-2 type transporter 367 576 IPR013525 GO:0016020|GO:0140359
Pral4504g00010 689 Pfam ABC-2 type transporter 232 362 IPR043926 GO:0140359
Pral4504g00010 689 FunFam ABC transporter G family member 11 25 269 - -
Pral4504g00010 689 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Pral4504g00010 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 275 IPR003439 GO:0005524
Pral4504g00010 689 MobiDBLite consensus disorder prediction 662 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4504g00010 Pral-Chr4504 109187 116393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4504g00010 47 276 Calmodulin-binding Proteins AT2G36910 27.888 9.64e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4504g00010 K05681 - gmx:100807692 1163.29