Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4504g00008 ATGTTTCAAGATGAAGGGTCATCTTCTGTAACTTCATCACCTTTTCAGTTCTTCTCTATGATGTCACTTTCACCTAGCTTAGGATCTCCATACCCTTGGCTTAGAGAGCTTAAATCAGAGGAAAGGGGCTTGTACTTAATCCATTTGTTGCTGACTTGTACAAATCATGTAGCTTCTGGTAGTCTTGAAAATGCAAATATGGCTCTCGAACAAATTTCCCATCTTGCTTCCCCGGATGGTGATACTATGCAGCGAATTGCTGCCTATTTTACTGAAGCACTTGCTGATCGGATACTTAAAACATGGCCTGGTCTCCACAAGGCCCTCAATTCTACTAGAATAGTCATGGTTTCCGAAGAAATTCTGGTCCGGAAGCTGTTTTTTGAGCTGTTCCCATTCTTGAAGGTGGCGTTCGTGCTCACAAATCAGGCTATCATGGAAGCAATGGAAGGAGAGAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTCCTCCAAGTTTTGAGTGCTCGGCCTGAAGGCCCTCCTCACTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTGGATCAGATGGCTCATAGGCTGATTGAAGAAGCAGAAAAGTTGGACATCCCATTCCAGTTCAATCCTGTTGTGAGCAAGTTAGAGAATCTTGATTTTGACAAACTCCGTGTGAAGACTGGAGAAGCACTAGCAATCAGTTCGATTGTCCAATTACATTCGCTTTTGACATTGGATGATGAATTGCGCAGAAGACCTCCTCTCCTAACAAAATGCTCAAATGGAAGTCATCTACAAAGAGCCGTGCCAATGAATCAGAGCTCATTAGGTGATTTGCTTGAGAAGGATATGATCAATAATAGGTACAGCCCAAGTCCTGACTCGACCTCATCATCCCCAGCATCGTCAATTGCTTCAATGAGCATGGAGAGCTTTCTCAATGCCTTGTGGGGTTTGTCTCCCAAAGTCATGGTTGTGACAGAACAAGACTCTAATCACAATGGTTCAACTCTAATGGAGAGGGTATTAGAAGCTCTGTACTCTTACGCAGCGTTGTTTGATTGTTTGGAATCCACAGTCTCAAGAACATCAATGGAGAGATTAAAGGTGGAGAAGATGCTTTTCGGTGAGGAAATCAAGAACATTGTTGCGTGTGAGGGAGCTGAAAGAAAGGAAAGGCATGAAAAGCTTGATAAGTGGCTACAGAGGCTTGATCTTGCCGGGTTTGGGAATGTGCCTTTAAGCTATTATGGGATGTTACAAGCAAGGAGATTACTACAGAGCTATGGCTGTGAGGGATACAAAATGAGGGAGGAAAATGGCTGTGTTGTTATTTGCTGGCAGGATAGGTCACTTTTTTCAGTATCAGCATGGAGACCTAGGAAGTAA 1416 0.4336 MFQDEGSSSVTSSPFQFFSMMSLSPSLGSPYPWLRELKSEERGLYLIHLLLTCTNHVASGSLENANMALEQISHLASPDGDTMQRIAAYFTEALADRILKTWPGLHKALNSTRIVMVSEEILVRKLFFELFPFLKVAFVLTNQAIMEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEILDQMAHRLIEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSIVQLHSLLTLDDELRRRPPLLTKCSNGSHLQRAVPMNQSSLGDLLEKDMINNRYSPSPDSTSSSPASSIASMSMESFLNALWGLSPKVMVVTEQDSNHNGSTLMERVLEALYSYAALFDCLESTVSRTSMERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVICWQDRSLFSVSAWRPRK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4504g00008 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Pral4504g00008 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 464 IPR005202 -
Pral4504g00008 471 Pfam GRAS domain family 46 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4504g00008 Pral-Chr4504 86908 89724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4504g00008 1 471 GRAS Transcription Factor Family AT1G50420 71.102 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4504g00008 GRAS 4.7e-141 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4504g00008 - - cave:132164091 756.518