Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4502g00012 ATGGATGTTGCTGCTTCTGTTACGGCTAATATACTGACCAAGTTAGTAGATGAAGCAATACTTCAAGCTTGCTATCCTTTCCGCTTCAACAAGTATGTCAAAGAGCTTGAAACAGAAAAAGAGAACCTGCAATCGAAAAAACAAGAGGTTCTAGATCGTGCTAAAGATGTGAGGATGAATACTCATAAGGTTGTTGGTAAAGTTGAGAACTGGTTGGACAAAGCAGACTCCCTGATGGCAAAGGTGGTGGAGCTGCAAGAGAAAACAAAGAAAAGAAACAAGATGCCTTGTCTAAAGCATTGTCCAAGCTTGATCAGTCGTTATAATCTGGCAAAGCAGCTTGAGGAGAAGACTAATGAAATTAGAGAGCACAATAAAGTTGAATTCTCGGAGTTTTCTCGACTTACTTCGCTTGTAGGTATGAACTACTTTTCTTCACAAGATTTTGTGGCCTTTGACAGTAGAAAGGGGGTTTGTGAGGACCTTTTGAGGGCTATTAAGGATGATGAGATTCATATGATAGGATTGTATGGCATGGGCGGGTCTGGGAAAACAACTTTGGTAAAAGAAGTGGGCAAAGAAGCAGAGAAATTTTTTGACAAAGTAGTCTTTGTGGTTGTGTCTAATACCATTGATGTAAGAAAAATTCAGAGCGAGATTGCCAGCCCACTAAAGTTGGGATTGAAAGAGGAAGAGACACGAGTGATAGCTAGACGCTTATCCATGAGATTGAGTAGTGGAGAAAGGTTTTTGATTATTCTGGATGACGTATGGGAGAAGCTTAATTTTGAGGACATAGGGATTCCTACTAATAATGATCAAATGGGCTGCACTATTCTTATAACCACCCGCAACTTACATCTATGTAAATCGATGGGTTGCCAAAAAAATATTCCCTTGGAGGGTTTGAAAGGGAATGATTCGTGGGCCCTTTTTAAGAAGCATGCTGGGTTGTCTGATGATTGCTTTGATAAATGGAAGGATATAGCAAAAAAAATTACAAAAAAATGTGATGGTTTACCTATTGCAATTGCAGCAGTAGCCAGTGCTTTGAAGGATAAACCTTTTGATGACTGGGTTGCAGCATGGAAAACATTGAGAGATCCTAGCTGGATAGATATTGAAGATAGTTTAAAAAGCACTTACGGATGTATTCGGTTAAGCTATGATCATTTAGAGAATGAGGTGGCTAAGTCACTCTTCTTATTTTGTTCCGTATATCCAGAAGATTATGAAATTCTTGTTGATAAATTAACCATAATTGGACTAGGCCTTGGTCTAGCAGGAGATATTTCCTCACATTGGTGGGCAAGGACTCAAGTGATCAATAAAGCTATAAAGAAGCTTATAGATTCTTGTTTACTGCTAAAAGTTGATCATGAAGATGGAAGTCATTGCATCAAAATGCATGACTTGGTTCGTGATGTAGCACTATGGATGGCAAAAAAAGAGACAAGTAAGGATATGATGAAAAGGGCAAAGACTCTTTCTTTGAGGAGAATTCCTAGAAGTTGGAAAAATATCATTCCTGACCTGTGTCAAACAATAGGAGGAAGTATGAATGAGTTGACTCGTCTTGCTATTCATGATTCAGACGGGATAGAATGCGTGATAGGCCATGCAACTAATATAAGTCAAGTTGGAATCATCTCCAATTTGACTCGTCTAACTCTTTCAAAGGTGAAGCATTTGAAAACTTTGCATAGTGGTCATCCTCCACATGGCCTTTTCGCAAACTTGGAGGGACTTCGTATAGAAAGTTGTGATTCACTTGAGCACATACTGACAGAAGATGTGAAGGAAATAGTTGATGGAAGTGAATATCAGAATTACGAAAATGCATTTCCCAAATTGAAAGGACTTGAAATAGGCAATTGCAAGCAACTAAAATATTGA 1896 0.3861 MDVAASVTANILTKLVDEAILQACYPFRFNKYVKELETEKENLQSKKQEVLDRAKDVRMNTHKVVGKVENWLDKADSLMAKVVELQEKTKKRNKMPCLKHCPSLISRYNLAKQLEEKTNEIREHNKVEFSEFSRLTSLVGMNYFSSQDFVAFDSRKGVCEDLLRAIKDDEIHMIGLYGMGGSGKTTLVKEVGKEAEKFFDKVVFVVVSNTIDVRKIQSEIASPLKLGLKEEETRVIARRLSMRLSSGERFLIILDDVWEKLNFEDIGIPTNNDQMGCTILITTRNLHLCKSMGCQKNIPLEGLKGNDSWALFKKHAGLSDDCFDKWKDIAKKITKKCDGLPIAIAAVASALKDKPFDDWVAAWKTLRDPSWIDIEDSLKSTYGCIRLSYDHLENEVAKSLFLFCSVYPEDYEILVDKLTIIGLGLGLAGDISSHWWARTQVINKAIKKLIDSCLLLKVDHEDGSHCIKMHDLVRDVALWMAKKETSKDMMKRAKTLSLRRIPRSWKNIIPDLCQTIGGSMNELTRLAIHDSDGIECVIGHATNISQVGIISNLTRLTLSKVKHLKTLHSGHPPHGLFANLEGLRIESCDSLEHILTEDVKEIVDGSEYQNYENAFPKLKGLEIGNCKQLKY 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4502g00012 631 Gene3D Ribonuclease Inhibitor 480 631 IPR032675 -
Pral4502g00012 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 404 IPR027417 -
Pral4502g00012 631 PRINTS Disease resistance protein signature 244 258 - -
Pral4502g00012 631 PRINTS Disease resistance protein signature 173 188 - -
Pral4502g00012 631 PRINTS Disease resistance protein signature 337 351 - -
Pral4502g00012 631 PRINTS Disease resistance protein signature 613 629 - -
Pral4502g00012 631 Gene3D - 386 478 IPR036388 -
Pral4502g00012 631 Gene3D - 135 298 IPR027417 -
Pral4502g00012 631 Coils Coil 29 60 - -
Pral4502g00012 631 Pfam NB-ARC domain 167 390 IPR002182 GO:0043531
Pral4502g00012 631 Coils Coil 68 88 - -
Pral4502g00012 631 FunFam Probable disease resistance protein At1g61300 136 297 - -
Pral4502g00012 631 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 515 631 - -
Pral4502g00012 631 Gene3D - 302 385 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4502g00012 Pral-Chr4502 307557 311114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4502g00012 170 487 WRKY Transcription Factor Family AT5G45050 23.313 8.83e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4502g00012 - - lang:109340689 423.705