Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4502g00004 ATGGCATTGGCACCGTCAGGTCTTTCATTCACAGTGCGTCGGCGTCAGCCAGAGCTGGTAGCTCCGGCAAAAGCAACGCCGCACGAGGTGAAGCTTTTGTCGGACATTGACGACCAAGGGAGCCTTCGGTTCCATGTGCCGGTGATCCAGTTCTATCGCGGCGATCCTTCGATGAGAGGAAGAGATCCTGTTGAGGTTATCAGAAAAGCATTGGCCGAGACTCTGGTGTTTTACTATCCCTTCGCCGGCAGACTCCGGGAAGGGCCTAACCGGAAGATCATGATGGACTGTAATGGCGACGGGGTCGTTTTCATCGAGGCCGACGCCGATGTCACTCTGGAGGAATTCGGTGATCTTCATCCTCCTTTTCCTTGCTTTGAAGAGCTTCTTTACGATGTCCCAGGAACCTTAGATCTTCTCAACACTCCACTTCTCCTTATTCAGATAAGCTCTTATTACTAA 462 0.5173 MALAPSGLSFTVRRRQPELVAPAKATPHEVKLLSDIDDQGSLRFHVPVIQFYRGDPSMRGRDPVEVIRKALAETLVFYYPFAGRLREGPNRKIMMDCNGDGVVFIEADADVTLEEFGDLHPPFPCFEELLYDVPGTLDLLNTPLLLIQISSYY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4502g00004 153 Gene3D - 11 152 IPR023213 -
Pral4502g00004 153 PANTHER ACYL TRANSFERASE 4 10 132 - -
Pral4502g00004 153 Pfam Transferase family 12 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4502g00004 Pral-Chr4502 105623 106285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4502g00004 12 152 Monolignol Biosynthesis Gene Families AT5G48930 34.043 3.36e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4502g00004 K19861 - tcc:18599665 236.884