Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4502g00002 ATGAAGTGTGATGAGAACCAACAGTTTTTATCTATCATAGATAATGGAATTGTAAGGATTAAAAAGTTCCCGCCCGGGTATAGATTTTGCCCCACAGAAGAAGAACTCATTGTGAAGTATCTGATGAAGAAGGTCAAGAATGAACCACTGCCACCAAATCTGATCATACCAGAGGTTGATATATATCAATACGATCCTGCAATTCTATGTGAAAACTACAAAGGCATGGATGAGAAAGCATGGTATTTCTTCTCACCAAGAGAAAGAAAATACCTGACTTGGTCAAGGGCAAAGAGATCCACAAATGAGGGCTATTGGAAAAATTATGGCGTTAGTAACAAGTCAATCTATTCAAAGAAGAGAATTGTGGGAAAATGGAGGATCTTAACATATTTCCAAGGAAAGAGTCCCACTGGAACAAAGACGACCTGGAACATGAAAGAATATTCACTTGTTGACTTGCCTCATCAAAGAACGATCAGTAACACTAATATGAAGTTACGTGACTTTGTCTTGTGCAAGATTTACAAGAGAGTTCCTCATCGTCGTCATGTTCTGAAGAACCAGAATAAAGAAAGAAAAATAACATATGATGAAAAGCTTCTTATGCATCAAGAAGAACTTTATCAGGATTATTATAATAATAACCATTTGGTTTCTGCATTAATGCCTACTCCTCAAGATCATGATGATGATGATGACTATTTTTCTTTTCTGGATGGCTATCCTTTAGAGGTTTTGCAAGAAATGGCTAGCGAACTGGAGGACTTGGAGGTTCTTCGTGGAAGACCTATTTTGCTCTCCGAACTTCGTCTTGGTCCATGTGATGGTACCCTATATGTGAAGGTGGACTGCATAATCACAAGGGCCTATGTTAAATTCACACAGAGAAGGAGGAGGCCTATCCTTGAAACAGTTTCTATCAACCTTGTACTATTTGACTATTAG 948 0.3808 MKCDENQQFLSIIDNGIVRIKKFPPGYRFCPTEEELIVKYLMKKVKNEPLPPNLIIPEVDIYQYDPAILCENYKGMDEKAWYFFSPRERKYLTWSRAKRSTNEGYWKNYGVSNKSIYSKKRIVGKWRILTYFQGKSPTGTKTTWNMKEYSLVDLPHQRTISNTNMKLRDFVLCKIYKRVPHRRHVLKNQNKERKITYDEKLLMHQEELYQDYYNNNHLVSALMPTPQDHDDDDDYFSFLDGYPLEVLQEMASELEDLEVLRGRPILLSELRLGPCDGTLYVKVDCIITRAYVKFTQRRRRPILETVSINLVLFDY 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4502g00002 315 ProSiteProfiles NAC domain profile. 23 178 IPR003441 GO:0003677|GO:0006355
Pral4502g00002 315 Gene3D NAC domain 32 181 IPR036093 GO:0003677|GO:0006355
Pral4502g00002 315 PANTHER NAC TRANSCRIPTION FACTOR 56 23 203 - -
Pral4502g00002 315 Pfam No apical meristem (NAM) protein 24 151 IPR003441 GO:0003677|GO:0006355
Pral4502g00002 315 SUPERFAMILY NAC domain 20 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4502g00002 Pral-Chr4502 87220 91147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4502g00002 23 178 NAC Transcription Factor Family AT1G69490 47.436 6.93e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4502g00002 NAM 4.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4502g00002 - - pcin:129302745 187.578