Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral449g00018 ATGTTTGCCATAGCTTCCCCATCATCATCTTCTTCTTCCAAGAAATATGATGTGTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTCACCAGCCATCTCCATACTGCCTTGTGCCTCAGAGATATTGAGACATACATTGATTATGAGCTCCCAAAGGGCGATGACATCTCCCAATCACTCATTGAAGCAATTCATGATTCATCCATCTCTGTGGTGGTTTTATCTAAAAACTATGCCACTTCAAAATGGTGTTTGAATGAGCTCCTTGAGATCCTTCGCTGCAAACAACATCAGGCACAGATTGTTGTTCCTATCTTCTACAAAATTGACCCATCTAATGTACGCAGACAAAAGGCAACTTATGAGAAAGCATTCGCAGAACATTTGGAGAAAAACTCAGAGAAGGTGGAGGAGTGGAGACAAGCACTTTTTGAGATTGCAAATCTAGCAGGATGGGACTCCTGCAAGTATAGGCATGAAGCAGAACTCATTCAAAATATTGTCACGGACATCAACAAAAAACTAAACCGTGGGTCCCCAACAACTGTATTAGAAAATATTATTGGAATTGATGAGAATTTAGATCATATTGAGTGGTTGTTAGAAGAATCCTCAACAATTGGGATTTGGGGGATGGGCGGGATAGGCAAAACAACAATGGCTAAGGTTGTGTTTGCCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGAAAAATTTTACAGAAAAGTACAAAAAGCATGGGTTAGAATATGTACGTGACGAACTTTTCCGAGAACTATCAAAGGATACATCTCTTGGGAGGCTCAATCGTAGAAAAGTTTTGATTGTACTTGATGATGTTAGCAAGACAAAGCAGTTAGAGGAGTTGAAGAGTGAAGTTCCTCATTTCGGACCTGGTAGTAAAATCATCATAACAAGTAGAGATAAGCATGTGCTTATTGTTGGAAGAGTTGATAAAATACATGAGGCCAAGGCATTGAGCGACAACAATTCACTTGAGCTTTTCAACCTCAAAGCCTTCCACAAAGATGGTTATGAAAGTGAATACGAACAACCAATTAAAAGAGCACTTGCTTATCCCAAAGGCATCCCACTGGCCTTAACCGTTTTGGGTTCGCTTTTGCATTCCAGACCTGCAAATCAATGGGAAGATGAGTTGAGTAAATTAGAAAGGAGGGCCAATGAAGATATTCAAGATGTGTTAAAATTGAGCTATGATGGACTCGATGACGAAGTGAAGGAGATATTTTTAGACATTGCTTTTTTTTTTAAAGGTAGATCTGGACAATATGTAGAAGCAATGCTAAAGAGCTTTGGCTTTCACGCAAGCATTGGTTTGGGAATTCTTGTGGATAGGGCGTTGATAAGTCTTAGTCATGATGCGGTATGGATGCATGATTTAATTCAATCAATGGCCTTCGAAATTGTTCGCAAAGAGTGCAAGAATCCAGGAGGACGTAGTCGACTACGGAATTCTGATGAGATCATCGACGTCCTAAAAAATAATCGAGGAAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTCAAATTAAGGAATTACAATTCTGTGCTGATGCCTTTGGAAAGATGACAAATTTAAGGTTTTTGGAACTCTATTCATCCAACCATGGGAGGACAAATTTAACCCCTTTGGAACTCTATTCATCCAACCATGGGAGGTCGTGTATTGTGAATCTTCCTCCAACGTTTGAATCATTTCCTAATTTATTACGGTATCTTCGATGGGACAATTTTCCTTTAAAGTCTTTACCATTGTCATTCTGTGCCGAGAAGCTAGTTCAACTTCACATGCCTAACAGCAGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGGAGATAAACCTTCGGGAATCCAAAAAATTGATAGAGTTGCCAGATTTGTCAACAGCTAAAACACTTGAACGGGTTGATCTTGGACGCTGTAAAAGTTTATGCCATCTTCATCCATCCATTTTATCTCTTTCGAGATTGAAGTATGTGGATCTTGAGCTTTGCCAAAACCTAAAGAGTTTGAAAACAGAGAGTCAATCAAAATCGCTCTTGAAACTACAGGTGGCTGGTTGCTATGGTCTCAAGGAATTTTCATTCTCTTCGGACAAACTTACTTATTTAGATTTATGGACCTCAACAGTCGAGAATATAGACTTTTCAATGGGGCATATGGAGAACCTTCGGCGTCTCTCTCTTAATGGTTTGAAACTAAAGAATCTTCCAACTAACGACATTTGTTGCATGAGATCTCTTAACCACCTTCGTCTTGAACGTTGCACGGGAATGATTGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCGATATCTGGTATCACTTTCTTTGAGAGAGTCATTCACATTAACGGAACTTCCAGACAATATCAAGCATCTCTCGAGGCTACACTCTCTTGATGTAAGCGGTTGCAGACACCTTCAATCTTTACCAGAGCTTCCTCCATCCATTGAAGAATTATATGCCACCAGCTGCACATCATTAAAGACGCTACAATTCCTTCGATCTCCATTGTTGGCAGATGAAAAAATGTTGGGTCCAGCATTCCGTTCCTCAGCTAGTTATCTCCAAAATCTTCGAGTTCTTTTTCTTTGTGGTTATGAACAGTTGTGTGAACTCCCTGAAAGCATTGGCTCCTTATCTTCATTGTCTTCACTGGATTTGAGTCGAAGTATTGTAGCGAGCTTGCCTGCTAGTATCAAGTATCTCTCAAATCTAGTAAAAATACGCTTGACCAATTGTACAAGACTTCGTTCTCTGCCAGAACTGCCGCCATCCATAGAAACCGTCGTCGCTCGTGGTTGCATATCATTGGAGATTGTACCCATTTCAATACCTTTTGCACCACAATTGAAGTTGCTACATCTGAGAGAGTGCTTGAAATTGGAGAACTGCTTTCTGTCTCATGTGGCAGAAAGTACTTATTTCTCATTGAAGCGATTGGCGTACACAAACCAAGGCGGTGCTGTCTGTTACCCTGGAATAAAAGTTCCAAAGTGGTTTGGATCTAATGGGAGAACAGAGGCTTCCAACTGTATAACTATTGAGTCTCCTTCAGCCATAAATGACCTGATCGGCTTCATCTTTTGCTGTATTCTTTCTCGACATTCCTATAACGTTGGCGTGCAATTGCAAATTTATTATGATGGTAAGCGGTGCGACAACTCAGAGTTTGATTCTTGTGCACGTGAAATTTTGGACTTTTGTGGTGGTGAAAATTCGGAATCACGTCATGTTTTTTGGTGGTGTGATCCTCGCCGATTCATAAAGTTCCACAAAGCAACGGACAACCAAAATGCCAATTACAGGCCAAAGGTGTCATTTGAATTCTCTGTTGCCAACTTTGAAGAGGAGCTTGTTGATTGTGTGATTGAAGCATGTGGAGTCTGTCCAATATATGCCTCGAAATATCACGACTTCATTCAACAAATGGGACGGGAGCCAAACTTGGGTACCCAAAAAGAGTCCTGTCACTATGCTGATGAGAATTCATTTCATGAAATGCTCCAATATGTTAGATTCTCATTAAAGCAAGGGGAATGTGGCAATTTTGAAGGAAGTACTATTCCAGAGTGGTTTACTTACAAAAGTTCAATGACAGAGCATAGTATTCGGAGTGTGAGTGTTCAGGTTGCTCCAGATTTTAAAAACTTAATAGGTTTCATTTTCTGCTTTGTCATACCTCACTTCTCCTCAAAAGAAAGGGATCAATATCACTCATCATGTGGATGCAATTGTTTTGACGGGGAAGAATTTCGCTTCTCTTTGCAAGGTCCAACAGGATGGCACTATTCAATGGAAAAATTGAATTCATATGCTAATGTGTTTCTATGGTATGATCCCCTCTATTGTGAACACATACTACACAAACTGCGAACAAAGGGAAAAGGTTATAATGAGGAGCTTGAATTTAAATTTGAGTTTGGTGAAGGCGAGATCCATGAATGGGGGCTTTATATTCGTGATTGCTTGTTCAAAGAATGTGGAGTACGGCCTATATATGTCTCAGAGTATACAAACTTCCTGCAACAAAAGAAAGTGGAGTTTGACATGTATTTAGCTGACAGTAAAAACCGACAGATGCTGCTGCTTAATGGGAAAACGTATTCATACTGTTGTTGGACATAA 4188 0.4009 MFAIASPSSSSSSKKYDVFLSFRGEDTRRSFTSHLHTALCLRDIETYIDYELPKGDDISQSLIEAIHDSSISVVVLSKNYATSKWCLNELLEILRCKQHQAQIVVPIFYKIDPSNVRRQKATYEKAFAEHLEKNSEKVEEWRQALFEIANLAGWDSCKYRHEAELIQNIVTDINKKLNRGSPTTVLENIIGIDENLDHIEWLLEESSTIGIWGMGGIGKTTMAKVVFAKLRSQFDSCCFLKNFTEKYKKHGLEYVRDELFRELSKDTSLGRLNRRKVLIVLDDVSKTKQLEELKSEVPHFGPGSKIIITSRDKHVLIVGRVDKIHEAKALSDNNSLELFNLKAFHKDGYESEYEQPIKRALAYPKGIPLALTVLGSLLHSRPANQWEDELSKLERRANEDIQDVLKLSYDGLDDEVKEIFLDIAFFFKGRSGQYVEAMLKSFGFHASIGLGILVDRALISLSHDAVWMHDLIQSMAFEIVRKECKNPGGRSRLRNSDEIIDVLKNNRGSDAIQGISLDLSQIKELQFCADAFGKMTNLRFLELYSSNHGRTNLTPLELYSSNHGRSCIVNLPPTFESFPNLLRYLRWDNFPLKSLPLSFCAEKLVQLHMPNSSLQKLWDGKQDLVNLREINLRESKKLIELPDLSTAKTLERVDLGRCKSLCHLHPSILSLSRLKYVDLELCQNLKSLKTESQSKSLLKLQVAGCYGLKEFSFSSDKLTYLDLWTSTVENIDFSMGHMENLRRLSLNGLKLKNLPTNDICCMRSLNHLRLERCTGMIDKSKLHSLFDALRYLVSLSLRESFTLTELPDNIKHLSRLHSLDVSGCRHLQSLPELPPSIEELYATSCTSLKTLQFLRSPLLADEKMLGPAFRSSASYLQNLRVLFLCGYEQLCELPESIGSLSSLSSLDLSRSIVASLPASIKYLSNLVKIRLTNCTRLRSLPELPPSIETVVARGCISLEIVPISIPFAPQLKLLHLRECLKLENCFLSHVAESTYFSLKRLAYTNQGGAVCYPGIKVPKWFGSNGRTEASNCITIESPSAINDLIGFIFCCILSRHSYNVGVQLQIYYDGKRCDNSEFDSCAREILDFCGGENSESRHVFWWCDPRRFIKFHKATDNQNANYRPKVSFEFSVANFEEELVDCVIEACGVCPIYASKYHDFIQQMGREPNLGTQKESCHYADENSFHEMLQYVRFSLKQGECGNFEGSTIPEWFTYKSSMTEHSIRSVSVQVAPDFKNLIGFIFCFVIPHFSSKERDQYHSSCGCNCFDGEEFRFSLQGPTGWHYSMEKLNSYANVFLWYDPLYCEHILHKLRTKGKGYNEELEFKFEFGEGEIHEWGLYIRDCLFKECGVRPIYVSEYTNFLQQKKVEFDMYLADSKNRQMLLLNGKTYSYCCWT 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral449g00018 1395 Coils Coil 383 403 - -
Pral449g00018 1395 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral449g00018 1395 Gene3D Ribonuclease Inhibitor 510 693 IPR032675 -
Pral449g00018 1395 Gene3D Ribonuclease Inhibitor 694 846 IPR032675 -
Pral449g00018 1395 Gene3D - 9 177 IPR035897 -
Pral449g00018 1395 SUPERFAMILY L domain-like 467 860 - -
Pral449g00018 1395 Gene3D Ribonuclease Inhibitor 863 1032 IPR032675 -
Pral449g00018 1395 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 709 IPR044974 GO:0006952
Pral449g00018 1395 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral449g00018 1395 SMART till_3 15 151 IPR000157 GO:0007165
Pral449g00018 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 423 IPR027417 -
Pral449g00018 1395 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral449g00018 1395 Pfam TIR domain 15 183 IPR000157 GO:0007165
Pral449g00018 1395 SUPERFAMILY L domain-like 782 1001 - -
Pral449g00018 1395 Pfam NB-ARC domain 200 410 IPR002182 GO:0043531
Pral449g00018 1395 PRINTS Disease resistance protein signature 208 223 - -
Pral449g00018 1395 PRINTS Disease resistance protein signature 811 827 - -
Pral449g00018 1395 PRINTS Disease resistance protein signature 364 378 - -
Pral449g00018 1395 PRINTS Disease resistance protein signature 271 285 - -
Pral449g00018 1395 Pfam Leucine Rich Repeat 603 622 IPR011713 -
Pral449g00018 1395 Gene3D - 178 322 IPR027417 -
Pral449g00018 1395 Gene3D - 329 413 IPR042197 -
Pral449g00018 1395 Pfam C-JID domain 1204 1357 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral449g00018 Pral-Chr449 164333 170271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral449g00018 723 936 WRKY Transcription Factor Family AT4G12020 28.507 4.26e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral449g00018 - - pcin:129289344 1203.73