Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral449g00017 ATGCTTGCCATAGCTTCCCCATCATCATCTTCTTCTTCCAAGAAATATGATGTGTTTCTGAGTTTTAGAGGAGAGGACACTCGCAAATCCTTCACCAGCCATCTCCATACCGCCTTACGCCATGGAGATATTGAGACATACATTGATTATGAGCTCCGAAAAGGCGATGACATCTCCCAATCACTCATTGAAGCAATTCGGGATTCATCCATCTCTGTGGTGGTCTTCTCTGAAAACTATGCCTCCTCCAAATGGTGTCTGAATGAGCTCCTTCAGATCCTTTGCTGCAAACAACAGCGGGGACAAATTGTTGTTCCTATCTTCTACGAAATCAACCCATCTGATGTACGCAAACAAAGGGGAGCTTATGAGAAAGCATTCGCAGAGCATTTGGAGAAAAACCCAGAGAAGGTGGATGAGTGGAGACAAGCACTTTTTGAGATTGCAAATCTAGTAGGATGGGACTCCCACAACTATAGAAATTGCTGTTTCTTTTCATATGAGCTTCTCTGGCAACTACTTAGCTGGTCTGTCAGTGAGTATTTGATGTTTAAGGAACTTCTAGCATGGGATGAAGCAGAACTAATTCAAAATATAGTCACGGACATCAACAAAAAACTAGACCATAGGTCCCCAACAACTGTACTAGATGATATTGTTGGAATTGATGAGAACTTGGATCATATTAAACCGTTGCTAGAAGAATCCTCAACAATTGGGATTTGGGGGATGGGCGGGATAGGCAAGACAACAATGGCTAAGGTTGTGTTTGCCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGAAAAATTTTACGGAAAAGTATGAAAAGCATGGGTTAGAATATGTATGTGATGAACTTTTCCGAGAATTATCAAAGGATACATCTCTTGGGAGGCTGAATCATAGAAGAATTTTGATCGTACTTGACGATGTTAGCCACACAAAGCAGTTAGATGAGTTGAAAAGTGAAGCTCCTTGTTTGGGTCCTGGTAGTAAAGTCATCATAACAAGTAGAGATAAGCATGTACTTGATGGAAGAGTTGAGAGAATACATGAGGCGAAGGCATTAAGCTACAACAGTTCACTTAAAGTTTTCAACCTTAAAGCCTTCCGCACAGATGGTTATAAAAGTGGATATGAAGAACTAGTTCAAAGAGCAGTTTCTTATGCACAAGGCATTCCATTAGCCTTAACCATTTTGGGTTCATTTCTATATTCCAGAACTGTGGAGGAATGGGAAAATGCGTTGAGCAAAGTAGAAAGCACTAGCAATCGAGATATTCAAGCTGTGTGGATTAAGAAGATATGTAGAAGAAATGCTAAAGAACTGTGGCTTTCAAGCAAGCATAATTGGTTTGAGAACCCTTATGGATAA 1383 0.4056 MLAIASPSSSSSSKKYDVFLSFRGEDTRKSFTSHLHTALRHGDIETYIDYELRKGDDISQSLIEAIRDSSISVVVFSENYASSKWCLNELLQILCCKQQRGQIVVPIFYEINPSDVRKQRGAYEKAFAEHLEKNPEKVDEWRQALFEIANLVGWDSHNYRNCCFFSYELLWQLLSWSVSEYLMFKELLAWDEAELIQNIVTDINKKLDHRSPTTVLDDIVGIDENLDHIKPLLEESSTIGIWGMGGIGKTTMAKVVFAKLRSQFDSCCFLKNFTEKYEKHGLEYVCDELFRELSKDTSLGRLNHRRILIVLDDVSHTKQLDELKSEAPCLGPGSKVIITSRDKHVLDGRVERIHEAKALSYNSSLKVFNLKAFRTDGYKSGYEELVQRAVSYAQGIPLALTILGSFLYSRTVEEWENALSKVESTSNRDIQAVWIKKICRRNAKELWLSSKHNWFENPYG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral449g00017 460 ProSiteProfiles TIR domain profile. 14 149 IPR000157 GO:0007165
Pral449g00017 460 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 164 - -
Pral449g00017 460 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 424 IPR044974 GO:0006952
Pral449g00017 460 SMART till_3 15 151 IPR000157 GO:0007165
Pral449g00017 460 Gene3D - 12 206 IPR035897 -
Pral449g00017 460 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral449g00017 460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 434 IPR027417 -
Pral449g00017 460 Gene3D - 207 353 IPR027417 -
Pral449g00017 460 Gene3D - 358 437 IPR042197 -
Pral449g00017 460 PRINTS Disease resistance protein signature 301 315 - -
Pral449g00017 460 PRINTS Disease resistance protein signature 393 407 - -
Pral449g00017 460 PRINTS Disease resistance protein signature 238 253 - -
Pral449g00017 460 Pfam TIR domain 15 217 IPR000157 GO:0007165
Pral449g00017 460 Pfam NB-ARC domain 235 427 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral449g00017 Pral-Chr449 145725 148969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral449g00017 11 439 WRKY Transcription Factor Family AT4G12020 27.009 2.13e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral449g00017 - - pcin:129288107 384.415