Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral449g00016 ATGGGTGTTGCAGCTTCATCTTCTTCTTCATCGTCCTCCAGGAAATATGAAGTCTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTCACCAGCCACCTCCATACTGCCTTATGCCTCAAAGGTATTGAGACATACATAGATTATGAGCTCCCAAAAGGCGATGACATCTCCCAATCACTCGTCCAAGCAATTCAGGATTCATCCATCTCTGTGGTGGTCTTCTCTCAAAACTATGCCTCTTCAAGATGGTGTTTGAATGAGCTTGTTCAGATCCTCTGCTGTAAAGAGCACCAGGCACAGCTTGTTATTCCTATTTTCTACCAAGTGGACCCATCTCATGTACGCAAACAAGGGGGAGCTTATGAGGAAGCATTCGCACAACATTTGGAGAAAAACCCAGAGAAGTTGAAGGAGTGGAGACACGCACTTTCTGAGACTGCAAGTTTAGCAGGATGGGACTCTCGCAACTACAGAGATGAAGCAGAACTCATTCAAAATATTGTCAATGACATCATCAGAAAACTAAACCATGCGTCCTCAAAAAGTGAATTAGCAAATATTATTGGAATTAAGGAGAATTCGGGTCATGTTGAAATGTTGCTAGAAGGATTCTCAACGATTGGAATTTGGGGTATGGCTGGGATAGGCAAAACAACCATGGCTAAGGTTGTGTTTGCCAAATTCCACTCTCAATTTGACAGTTGCTGCTTCTTGGAAAATTTAAGAGAAGAGTCCGAAAAGCATGGGCTAAAATATGTACATGATAAACTTTTCCATGAACTATTAAAAGATACATCTCTTAAAAGACTCGGTCATAGAAAAGTTTTGATTGTACTAGATGATGTGAGCAGCACAAGTCAGTTAGATTATTTGGAAAGGGAAGCTCCTCTTTTAGGACTTGGTAGCAAAGTCATCATAACAAGTAGAGATAAGCATGTACTTGATGGAAGAGTTGAGAGAATACATGAGGCCAAGGCATTGAGCTACAACAATTCACTTGAGGTTTTCAACCTTAAAGCCTTCCGCAAAGATGGTTATAAAAGTGAATATAAAGAACTAGTCCAAAGAGCAGTTGCTTATGCTCATGGCATTCCATTAGCCTTAACCATTTTGGGTTCATTTCTATATTCCAGAACTATGGAGGAATGGGAAAGTGCATTGAGCAAGGTAGAAAGCACTAGTAATCGAGATATTCAAGCTGTGCTGAAATTGAGCTATGATGGACTTGATGAGGAAGAGAAAGAGATATTTTTAGACATTGCTTGGTTTTTGAAAGGTAAATCTAAAAAATATGCAATAGAAATGCTGGAGAGCTGCGGCTTTCATGCAAGCATTGGTTTGAGAACCCTTGCGGATAAGGCGCTAGTAAGTATTGATTATAAGATACAGATGCATGATTTGATTCAATCAATGGCTTTTGAAATTGTCCGTCAAGAGTGTATGGAAAATCCTGGAGGACGTAGTCGACTACGGAATCCTAAAGAGATCTATGATGTACTAAAAAATAATCAGGGAACTGATACAATTCAAGGCATAAGTTTAGATTTGTCTCAAATTAGAGGTTTACAATTGAATGCTGATGCCTTTAGCAAGATGACTAATTTAAGATTTTTGAAATTCTATTCACCTGAGGATAAAAGACCGTGCACTGTGAATCTTCCTTCGGGGCTCGAGTCATTTCCCAACTCATTAAGGTATCTTCAGTGGGACGATTTTCCTTTAAAGTCTCTACCATTGTCATTTTGTGCTGAGAAGCTAGTTGAATTACACATGCCTAACAGCCACCTTAAAAAACTATGGGACAGCATGCAGAACTTGGTGAATTTAAGAATGATAAACCTTGTGGGATCCAAACAATTGAAAGAGTTACCAGATTTCTCAGCCGCTCGAAATCTTGAACGAATTTTTTTTAGGTCGTGTGAAAGTTTATGCCACCTTGATCCATCTATTTTATCTCTCCCAAGATTGAGGGATGTGGATCTTAGCAGCTGCAGAAACATGAAGAGTTTGAAAATGGAGAGACAGTCAAAATCTCTCGAACGCCTATCTGTCCATGGTTGCTATGGTCTCAAGGAGTTTTCATTCTCTTCAGAAGTGATAGTTACTATGATAGGTTTAGAGGCGACAAGCGTTGAGATATTGGACTTTTCACTTGGGCCTATGGAGAAACTCGGAAGGCTCTCTCTCAGTGGCTCAACACTAAAGAATCTTCCGATTAACGGGATTTGTTGCATGAGATCTCTTCGAGACCTTCGTCTTCAAGATTGCGGAGGAATAATTGACAAATCAAAGCTCCACACGTTATTTGATGCTTTGTTATATCTAGAAACAATTGTCTTGTATCGGACTTGCAAATTAACTGAACTTCCAAGCAATATCAAGCATCTCTCAATGCTAAGATCTCTTTACGTAAGCTCTTGTAAGGACCTTCAATCTTTGCCAGAACTTCCTCCATCCGTTGAAGAATTACATGCTTGGAATTGTGCATCTTTAAAGACATTACAACTAACTTCTCATATTGGGTCTTCATTGTCGGCAGATGAAATAATGTTGGGTTCAACGGTCTGTTCATCAGTTGCTTATCTCAGAAATCTTCGAAGTCTTAATCTTCATGGTTGTGAACAATTTTATGAATTCCCTGAATTCAGTGACTCCTTATCTTCGTTATCTTCATTGTCGTTGAGAGGAAGTAATGTAGAGAGCTTGCCTCCCAGCATCAAGCATGTTTCAAAATTAAAATGTCTTCACTTGAGCAACTGTAGAAGGCTTCGTTCTCTGCCAGAACTGCCACCGTTCATCGAAACTGTTCATGCTAGTGATTGCGTATCACTTGAGATTGTACCCATTTCAATACCTTTTGCACCACAGTTGGCCTTCCTATTTCTAAAAGATTGCTTCAAATTGGAGAATAGTTTCTTATCTCGTGTTACGGAAAGTGCTTATTTCTCATTGAAGCGATTAGTGTACACAAAGCAAAGAGGTGGTGTTTGTTACCCCGGAAGAAATGTTCCAAAGTGGTTTAAATTTAATCAGGAAACAGAGGCTTCCAACTATATAACTATCGAGCCTCCTTCCACCTCGAACGATTTAGTTGGCTTCATTTTCTGCTGTATTCTTTCTCATCGCCCTCCTGGTTACTTGCAATGCAAATTTTATTACGATGGTAAGAAGCGCGGATGCTCAACATTTGATATGAGGAGGTATAATTTGGATTCACATCATGTTTTGGATTCACATCATGTTTTTCTATGGTGTGATCCTGACATATTCATAAGATTCCACAAAGCAATGGACGATCAAAACACCAATTCCAGGCCAAAGTTGTCATTTAAATTCTCTTATGTTACGTATCGAAAGAGTTCTGTTGATGTTGTGATCGAAGCATGTGGAGTCTGCCTAGTATATGCCTCTGAATACCACTGCTTCATTCAGCAAATGGAAATGGAGCCAAACGTGACCTTGGGTTCCCAAAATGAGACTTGTCATGATGCCAATGAGAATTCATTTCATGGAATACCAGAATATGCTAGTTTCTCATTGAAGCAAGGAATATGTGGCAACTTCAAAGGAAGTATTATTCCAGAGTGGTTTACTGATAAAAGTTCGACGATAAAGTATGGATACTTACAAGTGAGTGTTCAGCTTACTCCAGATTTTGACAACCTAAAGGGTTTCATTTTCTGCTTTGTTATACCTCATCTCTCCTCAAGAAAAAGGGATCAATGTCGCTCATCATGTGGATGCACGTTATATGACAGGAGGTATATTCGCTTCGATTTGAAAGGCCGAACAGGATGGCACTATTCAATGGTGAAATTGGATTCAGATAATGTTTTTATGTGGTATGATCCCCTCTATTGCGATCGCATACTGCAAGAACTCCGAAGAAGTGGAATACATAATGATACAGAGCTTAAATTTGAATTTCAGTTTGGTGACCGTAAGCTCTGTAACGGGGGAGTTTATATTCATCATTGCTTGATTAAAGAATGTGGAGTTCGCCCAATATATATCTCAGAGTACACAAACTTCCTTCAACAAAAAAAATTGGAGGTAAGCATGCCAAAAAAGAGGCATCGGAGCATTGATGATGACCAACATCAACTCGCTTCAACAAAGAAATTGAAGGACTCTCAGATCATTCAATCTAGTCTCCTGAATTCTGAGTCCAAGACATCTCATGATGCTTATAATGAGCTGCTACTTATGCTGTCCCAATTGAATTTGGAATCCACAAAGCAACACATTCATCATAAGTAA 4266 0.3938 MGVAASSSSSSSSRKYEVFLSFRGEDTRRSFTSHLHTALCLKGIETYIDYELPKGDDISQSLVQAIQDSSISVVVFSQNYASSRWCLNELVQILCCKEHQAQLVIPIFYQVDPSHVRKQGGAYEEAFAQHLEKNPEKLKEWRHALSETASLAGWDSRNYRDEAELIQNIVNDIIRKLNHASSKSELANIIGIKENSGHVEMLLEGFSTIGIWGMAGIGKTTMAKVVFAKFHSQFDSCCFLENLREESEKHGLKYVHDKLFHELLKDTSLKRLGHRKVLIVLDDVSSTSQLDYLEREAPLLGLGSKVIITSRDKHVLDGRVERIHEAKALSYNNSLEVFNLKAFRKDGYKSEYKELVQRAVAYAHGIPLALTILGSFLYSRTMEEWESALSKVESTSNRDIQAVLKLSYDGLDEEEKEIFLDIAWFLKGKSKKYAIEMLESCGFHASIGLRTLADKALVSIDYKIQMHDLIQSMAFEIVRQECMENPGGRSRLRNPKEIYDVLKNNQGTDTIQGISLDLSQIRGLQLNADAFSKMTNLRFLKFYSPEDKRPCTVNLPSGLESFPNSLRYLQWDDFPLKSLPLSFCAEKLVELHMPNSHLKKLWDSMQNLVNLRMINLVGSKQLKELPDFSAARNLERIFFRSCESLCHLDPSILSLPRLRDVDLSSCRNMKSLKMERQSKSLERLSVHGCYGLKEFSFSSEVIVTMIGLEATSVEILDFSLGPMEKLGRLSLSGSTLKNLPINGICCMRSLRDLRLQDCGGIIDKSKLHTLFDALLYLETIVLYRTCKLTELPSNIKHLSMLRSLYVSSCKDLQSLPELPPSVEELHAWNCASLKTLQLTSHIGSSLSADEIMLGSTVCSSVAYLRNLRSLNLHGCEQFYEFPEFSDSLSSLSSLSLRGSNVESLPPSIKHVSKLKCLHLSNCRRLRSLPELPPFIETVHASDCVSLEIVPISIPFAPQLAFLFLKDCFKLENSFLSRVTESAYFSLKRLVYTKQRGGVCYPGRNVPKWFKFNQETEASNYITIEPPSTSNDLVGFIFCCILSHRPPGYLQCKFYYDGKKRGCSTFDMRRYNLDSHHVLDSHHVFLWCDPDIFIRFHKAMDDQNTNSRPKLSFKFSYVTYRKSSVDVVIEACGVCLVYASEYHCFIQQMEMEPNVTLGSQNETCHDANENSFHGIPEYASFSLKQGICGNFKGSIIPEWFTDKSSTIKYGYLQVSVQLTPDFDNLKGFIFCFVIPHLSSRKRDQCRSSCGCTLYDRRYIRFDLKGRTGWHYSMVKLDSDNVFMWYDPLYCDRILQELRRSGIHNDTELKFEFQFGDRKLCNGGVYIHHCLIKECGVRPIYISEYTNFLQQKKLEVSMPKKRHRSIDDDQHQLASTKKLKDSQIIQSSLLNSESKTSHDAYNELLLMLSQLNLESTKQHIHHK 1421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral449g00016 1421 Pfam TIR domain 15 184 IPR000157 GO:0007165
Pral449g00016 1421 Pfam Leucine Rich Repeat 587 603 IPR011713 -
Pral449g00016 1421 PRINTS Disease resistance protein signature 363 377 - -
Pral449g00016 1421 PRINTS Disease resistance protein signature 909 925 - -
Pral449g00016 1421 PRINTS Disease resistance protein signature 271 285 - -
Pral449g00016 1421 PRINTS Disease resistance protein signature 208 223 - -
Pral449g00016 1421 Gene3D - 328 412 IPR042197 -
Pral449g00016 1421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 422 IPR027417 -
Pral449g00016 1421 Pfam NB-ARC domain 208 409 IPR002182 GO:0043531
Pral449g00016 1421 SUPERFAMILY RNI-like 831 980 - -
Pral449g00016 1421 Gene3D - 3 149 IPR035897 -
Pral449g00016 1421 Gene3D Ribonuclease Inhibitor 848 1012 IPR032675 -
Pral449g00016 1421 Pfam C-JID domain 1000 1140 IPR045344 -
Pral449g00016 1421 Gene3D Ribonuclease Inhibitor 704 847 IPR032675 -
Pral449g00016 1421 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral449g00016 1421 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral449g00016 1421 Gene3D - 161 323 IPR027417 -
Pral449g00016 1421 SUPERFAMILY L domain-like 465 837 - -
Pral449g00016 1421 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral449g00016 1421 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 696 IPR044974 GO:0006952
Pral449g00016 1421 SMART till_3 15 151 IPR000157 GO:0007165
Pral449g00016 1421 Gene3D Ribonuclease Inhibitor 501 699 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral449g00016 Pral-Chr449 125195 131499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral449g00016 860 964 WRKY Transcription Factor Family AT4G12020 36.111 1.09e-07 55.1