Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral449g00010 ATGGGTACTGCTTCTTCTGCTTTAATATCTTCTTCTCAATCAACTTATTCAAAGAACTATGATGTGTTCATCAGTTTTAGAGGAGAGGACACACGCACAAATTTCACCAGCCATCTTCATTCTGCTCTCACCCACAAGTCCCTGAGAACCTTTATTGATTATGAGCTTCCCAAAGGCGATGATATCTCGGAATCTCTCATCCAAGCAATCAAGGATTCTAGTATATCTGTCGTGGTCTTCTCAGAGAACTACGCTTCCTCAAAATGGTGCTTGGATGAACTCACCCAGATACTCCAGTGCAGGAAAGATTTAGGCCAGTTTGTTATTCCTGTGTTCTACAAGGTTGACCCATCAGATGTTCGCAAGCAGAAGGGGACTTACCAGGAGGCATTTGCAAAACATGAGAGAGATTTCAGGCACAACCAGGGCAAGTTGAAGAAATGGAAAGATGCTCTTTTTGAAACTGCCAATTTAGCTGGATGGCACTCTCAATCCTTCAGGGACGAAGCTGAACTAATTCAGAACATTATTAAGGATGTTTTGCAAAAATTGGATCGCAAGTATCCAAGTATATTAGAAGGTCTTGTTGGAATTGATGAAAATTGTGAATGCATTGAGTTGTTACTGAGAAAATTTTCAATAATTGGAGTTTGGGGAATGGGTGGGATAGGTAAGACAACCATGGCTAAGGTTGTATTTGACAAACTATCTCCTCAATATCAAAGTTGCTGTTTCTTAGAAAATGTAAGGGAAGAGTCAGAAAAGCATGAATTAAAATATATACGTGATAAACTTGTTTCAGAGCTGCTTATGGAAGAAAATATCCATCTTACCCAACCTAAAGTTTTGGGATCTACTTTTGTTAGGAGAAGGCTTAGCTGCAGAAAAGTTTTCATTGTGCTAGATGATGTTGATAGTTCAGAGCAATTAGACTATCTCGCTAGAGAATGTGATTGCTTGGGGCAAGGTAGTAAAGTCATCATAACAACAAGAAATAGGCATATGCTTATTGGTAGAGTTAATGAAATATATGAGGCCAAGCCATTGAAGTATCAAGAATCCTTCAAGCTTTTCAACTTGAAAGCTTTTCACAATGATCATCCTGAAATTGGATATGAACAGCGATCAAAAAGGGTTGTTACTTACACCAAAGGCAATCCTTTAGCTTTAATAGTTCTGGGTTCTTTTCTTTACTCCAAAACTAAAGAAGAATGGGACAGTGCGTTAAGAAAATTCAAAAGGATTCCACATGAAGATATTCAGGAAGTGTTAAAATTGAGCTACAACGGATTAAACGATGAAGAGCAGGAAATATTTCTAGACATTGCGTGCTTTTTGAAAGGTGAACTTAAAGAACATATAATACAGCTATTAGACAGCTATGGATTCCATGCAAGAATTAGCATTAGAACCCTCCAAGATAAGGCTCTTATTACTGTGGGTGAAAGATTGTGGATGCATGATCTAATACAAGAAATGGGTTGGGAGATAGTTCGTCAAGAATGTATTAAAGAACCAGGAAGACGCACTAGATTATGGGACCCTAAGGAAGTCTATGATGTATTGAGAAGCAATCGGGGAACTGAAGCTGTCGAAGGCATAATCTTAAATGTGTCTCGAATTAAAGATATATACTTGGATGCCGACACCTTCAAAAAGATGACTAATTTAAGATTCCTGAAATTTTATTCCTTATGCAATGCTGGATCATTCAATGTGCATCTTCAGAAGGGTCTTGAGTCTATTTCTGATAAATTAAGGTACTTTCAGTGGGATGGGTACCCTTTGGGTTCTTTGCCATCAACTTTTTGTACTGAGAGCCTTGTTGAACTGAAAATGCAATACAGCCATGTTCAAACACTTTGGGATGGCGTGCAGGATTTTGTAAATTTGAAGAGAATAGATCTTCGTTTTTCCAGAAAACTGAGACAGTTGCCTGATTTCTCCAAGGCCCATAATCTGGAATTGGTGAATCTATATTACTGTGAAAGTTTGCGTTATGTCCATCCATCTATCTTATCTCTCAAGAGCCTTGTTTCTTTGGATTTAGGCAAATGCAAAAACCTCGAGAGTCTCCAAAGCGATACTCATTTAAGATCTCTTAGAAAAGTCCTTGTTCATGACTGCCCTAATCTGAAGGAATTCTCTTTATCATCCAAAGAACTAAGATGTTTATTTTTAGGGTCAACTGGTATAGAAATTCTACACCCATCAATCGGAAGTCTTGCAAAGCTTAGAAGTCTTCATCTCAATGGTTCAAAATTGAAGAATCTTCCACTAAAGGAGTTATGTTGCTTAAGATCTCTTGAGGATCTTGGTATCTACAACTATGCGTTTGACAAACATGTGCTGCACATGCTATTTGATGCCTTACGTGCTTTACGAATACTAAGCTTCCTGAATTGCTCTAACTTAACTGAGCTCCCAAACAACATCAAGCAACTCTCAAGACTTCAAAGGCTTCATTTGAGAAGTTGCAGAAATCTTCAATGTTTACCAAAGCTCCCTATGTCTGTTAAAGAGCTAGATGTCTCCAACTGCCCATCAATTTCAATCAACTGTAAGTTGTTGAAGGAAGTAGGAAAATTGGTTCCAGCACTGCACACCTCCTCAATTGGGCATCTTGGCAATCTCAAAACTCTACTTCTTGATGCTTCAAGTCTTGGCAATCTTCCAATAACTGAGTTATGTTGTTTTAGATCTCTCAAGGAGCTTCGCCTTCGAAAATGCAGACACCTAGTGGATGAACCAAAGCTACATATACTATTTGAATCCCTGCAATGTCTACAAATACTGGATTTGGAGGACTGTTCTGGCTTAACTAAGCTCCCCAACAATATCAAACATCTCTCACGGCTGCAAAAACTTACTTTGAATGGTTGCACTAAGCTTCAGTTTTTACCCCAGCTTCCACGGTCTCTTAGAAATTTTATGGCCAGTAATTGCACATCATTAGAGAGAGTGTTCGCTTCAACAATTTCAAGGCTATTACGGTCATTCCTCAATTCATCTCTAAGGAAAAAAATCAAGCGGCTGTGA 3039 0.385 MGTASSALISSSQSTYSKNYDVFISFRGEDTRTNFTSHLHSALTHKSLRTFIDYELPKGDDISESLIQAIKDSSISVVVFSENYASSKWCLDELTQILQCRKDLGQFVIPVFYKVDPSDVRKQKGTYQEAFAKHERDFRHNQGKLKKWKDALFETANLAGWHSQSFRDEAELIQNIIKDVLQKLDRKYPSILEGLVGIDENCECIELLLRKFSIIGVWGMGGIGKTTMAKVVFDKLSPQYQSCCFLENVREESEKHELKYIRDKLVSELLMEENIHLTQPKVLGSTFVRRRLSCRKVFIVLDDVDSSEQLDYLARECDCLGQGSKVIITTRNRHMLIGRVNEIYEAKPLKYQESFKLFNLKAFHNDHPEIGYEQRSKRVVTYTKGNPLALIVLGSFLYSKTKEEWDSALRKFKRIPHEDIQEVLKLSYNGLNDEEQEIFLDIACFLKGELKEHIIQLLDSYGFHARISIRTLQDKALITVGERLWMHDLIQEMGWEIVRQECIKEPGRRTRLWDPKEVYDVLRSNRGTEAVEGIILNVSRIKDIYLDADTFKKMTNLRFLKFYSLCNAGSFNVHLQKGLESISDKLRYFQWDGYPLGSLPSTFCTESLVELKMQYSHVQTLWDGVQDFVNLKRIDLRFSRKLRQLPDFSKAHNLELVNLYYCESLRYVHPSILSLKSLVSLDLGKCKNLESLQSDTHLRSLRKVLVHDCPNLKEFSLSSKELRCLFLGSTGIEILHPSIGSLAKLRSLHLNGSKLKNLPLKELCCLRSLEDLGIYNYAFDKHVLHMLFDALRALRILSFLNCSNLTELPNNIKQLSRLQRLHLRSCRNLQCLPKLPMSVKELDVSNCPSISINCKLLKEVGKLVPALHTSSIGHLGNLKTLLLDASSLGNLPITELCCFRSLKELRLRKCRHLVDEPKLHILFESLQCLQILDLEDCSGLTKLPNNIKHLSRLQKLTLNGCTKLQFLPQLPRSLRNFMASNCTSLERVFASTISRLLRSFLNSSLRKKIKRL 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral449g00010 1012 Gene3D Ribonuclease Inhibitor 866 1012 IPR032675 -
Pral449g00010 1012 Gene3D - 182 341 IPR027417 -
Pral449g00010 1012 Pfam NB-ARC domain 213 428 IPR002182 GO:0043531
Pral449g00010 1012 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Pral449g00010 1012 PRINTS Disease resistance protein signature 673 689 - -
Pral449g00010 1012 PRINTS Disease resistance protein signature 214 229 - -
Pral449g00010 1012 PRINTS Disease resistance protein signature 383 397 - -
Pral449g00010 1012 PRINTS Disease resistance protein signature 291 305 - -
Pral449g00010 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 442 IPR027417 -
Pral449g00010 1012 SUPERFAMILY L domain-like 485 853 - -
Pral449g00010 1012 FunFam Disease resistance protein RPS4 528 720 - -
Pral449g00010 1012 Pfam Leucine Rich Repeat 608 626 IPR011713 -
Pral449g00010 1012 Gene3D - 349 432 IPR042197 -
Pral449g00010 1012 Gene3D - 16 181 IPR035897 -
Pral449g00010 1012 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 717 IPR044974 GO:0006952
Pral449g00010 1012 SMART till_3 19 158 IPR000157 GO:0007165
Pral449g00010 1012 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Pral449g00010 1012 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 161 IPR035897 -
Pral449g00010 1012 Pfam TIR domain 19 190 IPR000157 GO:0007165
Pral449g00010 1012 Gene3D Ribonuclease Inhibitor 496 699 IPR032675 -
Pral449g00010 1012 Gene3D Ribonuclease Inhibitor 700 865 IPR032675 -
Pral449g00010 1012 SUPERFAMILY RNI-like 786 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral449g00010 Pral-Chr449 95098 99117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral449g00010 17 821 WRKY Transcription Factor Family AT4G12020 32.164 4.30e-104 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral449g00010 - - pcin:129288608 1684.46