Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral449g00008 ATGGGCGCTGCAGCTTCATCATCCTCCTCCTCCTCTTCTTCTGCATATTTTCCCAGAAAATATGACGTTTTTCTGAGTTTCAGAGGAGAGGATACTCGCAAAACCTTCACCAGCCATCTTCACACTGCCCTATGCATGAGCGGTATTCGAACCTACATAGATTATGAACTCCCAAAAGGGGATGACATTTCCCAATCTCTCATCCAAGCAATTGAAGATTCAAGCATATCTGCTGTCATCTTCTCAGAAAACTATGCTTTCTCAAAATGGTGTTTGAATGAACTGCTTAAGATACTGGAGTGTAAAGAAGTCCAAGGACAGCTCGTTATTCCTATTTTCCACCAAGTCGACCCATCTCATGTACGCAATCAAAAGGGAACTTACCAGGAAGCTTTTGAAAAACACTATACACAAAACCCAGAGAAGGTGAAGCAGTGGAAACGTGCTCTTTTTGAAATTGCAAACTTAGCTGGTTGGGACTCTCGGATCTATAGGGACGAATCACAACTCATTCATAATATTGTCAATGACATTTTGAAAAGATTGGAGCACATGTATCCAAGCACATTACAAGGTCTTGTTGGAATTGAAGAGAACGCTGATTGTATTGAATCATTGTTGGAAAATGCCTCAATAATTGGAATTTGGGGCATGGGTGGTATAGGCAAAACAACTATAGCTAAAGCTGTATTCACCAAGCTCTCCTTCCAATTTGATAGTTGTTGTTTTTTTGAGAATTTAAGAGAAGAATTAGAAAAATATGGACTAAAGCATATACGTGATAAACTTCTTAGAGAACTATTGATGGAAGAAGAGTCCATGGTTAGGTCCACGTCATTTGCCATGAGAAGACTTAGTTGTAAAAAGGTTTTCATTGTGCTTGATGATGTCAATAAGATAAATCAATTAGAATATTTGGCCAAAGAATGTCATGCCTTGGGACCTGGTAGTAAAGTCATCGTTACTACGAGAGATAAACATTTGCTTCTTGGAAGAGTTAATGAAATATATGAAGCCAAACCATTGAGCGATTACAAATCAGTTAGCCTTTTCAACCTCAAAGCTTTTCACAAAGATGATTATGAAAGTGGATATGAAGAACTATCTGAGAGAGTTGTTGCTTATGCTAAAGGCAATCCTTTAGCTTTAATCACCTTGGGTTCATTTCTATATTCCAAAACTATAGATGAATGGGAAAGTGCATTGACAAAATTGGAAAAGACAAGCCATGAAGATATTCATGCAGTGTTAAAATTAAGCTATGATGGACTAAACTTTGAAGAGAGAGAAATGTTTTTAGAAATTGCTTGCTTTCTAAAAGGTGAAAGTATTGCTAAAGTAGTAGCTCTTTTAGACAGCTATCGCTACCATGCAACAATTGGCTTGAGGACCCTCGTAGATAAGGCCCTTATACGTATTTCTTCTCATTATGTGGAGATGCATGATTTAATACAACAAATGGGTCGTGAAATTGTTCGTCAAGAGTGTGTAAAAAATCCTGGAAGACGAAGTCGACTATGGAATCCTGATGAAATCTATGATGCATTGAAAAATAATCGGGTAACTGATGCAGTTGAAGGCATAAGTTTAGATTTGTCTCAAATTGGAGATATATGCTTAACTTCCAACACCTTAAAAAAGATGACTAATTTGAGATTTCTCAAATTCTATTCATCTAATTCAGATAGAAGGTCATGTATGAATATTCCCTCAAGCCAAGGGTCATTTTCCAATCATTTATCTTATCTTCAATGGGATAATTTTCCTTTTGAGGCTCTACCATCATCTTTTTGTGCAGAGAAACTTGTTGAACTTAGTATGAATGGCAGCAAGCTTAAAAAATTGTGGGATGGAACACAGGATTTGGTAAATTTAAGGGGATTAGACCTTGGAGGATCTAAGCAATTGGCAGAGCTGCCTGATTTCTCCAAGGCACGGAAACTTGAATGGGTGAATCTCTTCTCATGTGAAAGCTTAAGCCATCTGCATCCCTCTATTTATTCTCTCCATAGATTAAAGTCTTTGGGGCTCACTAATTGCATAAAGCTGAAGCATTTGCAAAGCGAGAGCCCTTTAAAATCTCTAGAGAGCCTTAGTGTTGATAATTGCTATGGTCTCAAGGAATTTTCATTATCATCAGAGAGCATGACAGTTTTACAATTAAATAGAACTGGCATTGAGTCATTGGGCTCTTCAATTGGTTATCTTCAGAAACTCACTAGTCTCTCACTCAATTGCTCAAGACTAAAGAATATTCCAGTCAATGAGTTTTATGGACTGAGATCTCTAAAAGATCTTACTTTTTCTGATTGTGGAGAGATAATTGATGAATCAAAGTTATATATCCTATTTGATGCTTTACAATGTCTAATAAGTATTCATTTGGATGGGAGTTGCATCTTGACCGGGCTCCCCGACAATATCAAGCATCTATCAAGACTAGAATTTCTTTCCTTGATAAATTGCAAGAGCCTTCAATCTTTACCAAAGCTTCCTCCATCCATCAAAGACTTAGATGCTACCAACTGCACATCATTGGAGACGCTAATACTCACTTCTCATATTGAATTTCCATTGTTGCCACAGCAAATAATGCAGAATTTAACACCCTATTCCTCAATCAGGTATCTCAGAAATCTAAGAAGGCTTATTCTTTCATGTTGCAACATAGGGAACCGTTCACTTTCCCATATTATGGCGTTTGCTTACTTCTGTTTGAAGCGTGGTGTGCATACAAATCAAATGGTTGATGTTTGCTATCCAGGAAGAGAAGTTCCAGATTGTTTTAAACATAATCAGACAACTAAGGCTCCCAATTTCATAACTATTGAGCTTTCTTCAACCATGAACAACTTGCAAGGCTTCATTTTCTACTCTGTTCTTCCTCAGTTCACTCCAAAGGAAAGCTGTTCTTACAGAGTAAAATGCCAAATTTATGATGAAGATGGTGAATGCGGCACAAGCTTAAGTTTTGTTATAACAAATGTTAATTCACACCATGTTTTTCTGTGGACCACTCATAAAAACATATTCACAAAATATCCAGACGCCAATTACAAGCCAAAGCTTTCATTTGAATTCTATGTTGTTACATATGATAGCGATGATTTTATTGGGTTCGGTTTTATGAAGGAAACAAAACACGATGGCTTGATTGAAGCATGTGGAGTCTGCCCAATATATGCCCCAGATTATCACAGCTTCCTTCAGCAAGAGGAATTGGAGTTGGGAACAAGGGAGCAAAGGACTTTTGAAGATATTGAGGAGCATTCATTTCGTGGAATACTGGAATATGCTAGTTTCTCACTGAAGCAAGCAAAATGTGGTGGTTTTGAGACAAGTATTATTCCAGAGTGGTTTGCATACAAAAGCTTGACAACAGGGTCTTCTATCTCTGTTCAGCTTAATCCTAGTTTTGATGGCTTATTGGGTTTCGTTTTCTGCTTTGTTATTCCTCAATTCTCCCTAAAAGAAAGGGATCTACGGCACTCATCATGTGGATACTATGATGAAAATAACATTTATCAAGAAGGCCCTAGAGGATGGATGTTCAAAGCAGAATAG 3564 0.3746 MGAAASSSSSSSSSAYFPRKYDVFLSFRGEDTRKTFTSHLHTALCMSGIRTYIDYELPKGDDISQSLIQAIEDSSISAVIFSENYAFSKWCLNELLKILECKEVQGQLVIPIFHQVDPSHVRNQKGTYQEAFEKHYTQNPEKVKQWKRALFEIANLAGWDSRIYRDESQLIHNIVNDILKRLEHMYPSTLQGLVGIEENADCIESLLENASIIGIWGMGGIGKTTIAKAVFTKLSFQFDSCCFFENLREELEKYGLKHIRDKLLRELLMEEESMVRSTSFAMRRLSCKKVFIVLDDVNKINQLEYLAKECHALGPGSKVIVTTRDKHLLLGRVNEIYEAKPLSDYKSVSLFNLKAFHKDDYESGYEELSERVVAYAKGNPLALITLGSFLYSKTIDEWESALTKLEKTSHEDIHAVLKLSYDGLNFEEREMFLEIACFLKGESIAKVVALLDSYRYHATIGLRTLVDKALIRISSHYVEMHDLIQQMGREIVRQECVKNPGRRSRLWNPDEIYDALKNNRVTDAVEGISLDLSQIGDICLTSNTLKKMTNLRFLKFYSSNSDRRSCMNIPSSQGSFSNHLSYLQWDNFPFEALPSSFCAEKLVELSMNGSKLKKLWDGTQDLVNLRGLDLGGSKQLAELPDFSKARKLEWVNLFSCESLSHLHPSIYSLHRLKSLGLTNCIKLKHLQSESPLKSLESLSVDNCYGLKEFSLSSESMTVLQLNRTGIESLGSSIGYLQKLTSLSLNCSRLKNIPVNEFYGLRSLKDLTFSDCGEIIDESKLYILFDALQCLISIHLDGSCILTGLPDNIKHLSRLEFLSLINCKSLQSLPKLPPSIKDLDATNCTSLETLILTSHIEFPLLPQQIMQNLTPYSSIRYLRNLRRLILSCCNIGNRSLSHIMAFAYFCLKRGVHTNQMVDVCYPGREVPDCFKHNQTTKAPNFITIELSSTMNNLQGFIFYSVLPQFTPKESCSYRVKCQIYDEDGECGTSLSFVITNVNSHHVFLWTTHKNIFTKYPDANYKPKLSFEFYVVTYDSDDFIGFGFMKETKHDGLIEACGVCPIYAPDYHSFLQQEELELGTREQRTFEDIEEHSFRGILEYASFSLKQAKCGGFETSIIPEWFAYKSLTTGSSISVQLNPSFDGLLGFVFCFVIPQFSLKERDLRHSSCGYYDENNIYQEGPRGWMFKAE 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral449g00008 1187 Gene3D Ribonuclease Inhibitor 709 908 IPR032675 -
Pral449g00008 1187 Gene3D Ribonuclease Inhibitor 515 708 IPR032675 -
Pral449g00008 1187 Pfam Leucine Rich Repeat 601 620 IPR011713 -
Pral449g00008 1187 Gene3D - 342 425 IPR042197 -
Pral449g00008 1187 Gene3D - 18 181 IPR035897 -
Pral449g00008 1187 Pfam NB-ARC domain 206 421 IPR002182 GO:0043531
Pral449g00008 1187 PRINTS Disease resistance protein signature 376 390 - -
Pral449g00008 1187 PRINTS Disease resistance protein signature 809 825 - -
Pral449g00008 1187 PRINTS Disease resistance protein signature 212 227 - -
Pral449g00008 1187 PRINTS Disease resistance protein signature 284 298 - -
Pral449g00008 1187 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 159 IPR035897 -
Pral449g00008 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 433 IPR027417 -
Pral449g00008 1187 SUPERFAMILY L domain-like 480 890 - -
Pral449g00008 1187 Pfam TIR domain 20 194 IPR000157 GO:0007165
Pral449g00008 1187 Gene3D - 182 333 IPR027417 -
Pral449g00008 1187 SMART till_3 20 156 IPR000157 GO:0007165
Pral449g00008 1187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 752 IPR044974 GO:0006952
Pral449g00008 1187 ProSiteProfiles TIR domain profile. 19 182 IPR000157 GO:0007165
Pral449g00008 1187 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral449g00008 Pral-Chr449 77065 82004 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral449g00008 19 823 WRKY Transcription Factor Family AT4G12020 34.262 2.66e-108 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral449g00008 - - pcin:129289671 1588.55