Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral449g00003 ATGACGAAAATGAGGCGTAGGAGGAAATCGTTGCGGCCTAAGAATCTTGGGCGACCAAGGCAGTTGAAGAGAGGGATGGAGGTGGGGTTGGAACGGAAGGCGATGGGACGGCAGAGCATTAGGTGTAGTTGTGAGGAAGGTTGGCGAGGGGAATCTGGACGTCCGGCGATGAACCTAGATCTGATCGGGTGCGAGGAATGTTGGCCGCGAGGAAGAGTTAAAAGTCAGTCAACTCTAATCACTGCCTCACACCTTCATCACCATTTCAATATCATGGCTGCTGCTGCTGCTTCGTCCTCTTCCTCCTCTTCCTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTTAGTTTCAGAGGCGAGGACACTCGCAGAACGTTCACCAGCCATCTCTTCACTGCTTTGTGCAAAAGGGGAATTCGAACCTACATAGATAATGAGCTCAGAAAAGGGGATGACATCTCAGACTCACTCATCCAGGCAATTAAAGATTCAAGTATAGCTATGGTGATCTTCTCTGAGAACTATGCCTCCTCAAAATGGTGTTTGAATGAACTTATCCAGATCCTTTGGTGTAAAGAGGTCCAAGGACAGCTTGTTTTTCCTGTCTTCTATCAAATTGACCCATCTGATGTGCGCAATCAGAGGCGAACTTACATGGAGGCATTCGCAAAACACGAAAGAGACTTCAGGCTTAATCAAGAGAGGGTGAACAAGTGGAGACAAGCTCTCTTTATAACTGCAAATTTGTCTGGCTGGGACTCTCGAACCTTTAGGGACGAATCAGAACTCATTCAAAACATTGTCAACCACGTTCAGCAAAAGATTAACCTCAGTTATCCAAGTTCATTGATGGGTCTTGTTGGAATTGATGAAAATTGTAGCGAGATTGAAAGGTTACTGGAAAAAGTCCCAATAATTGGAATTTGGGGTATGGGTGGTATAGGCAAGACCACCATGGCTAAGGCTTTATTTACCAAACTCTCCTTCAAATTTGAGAGCTCTTGCTTTTTGGAGAATGTAAGAGAAGAGGTAGAAAAGCAAGGATTGACATGCGTACGCAACAACCTTCTGTTTGAGCTAATGAAGGAAGAAAGTTTCCCTTATAGGCCACCTAATGTTGCAAGTAACGCCTCTGTTATGAGAAGACTAAGTTGTAAAAAAGTCTTCATAGTGCTTGATGATGTTAGTAGTTGGAAGCAATTAGAATATTTAGCTCCATATTGTGACTACTTGGGACCAGGCAGTAAAGTCATCATTACAACAAGGCATAAGCAGTTGCTTGTAATTGCAGCAGTTAATGAAATATATGAGGCCCAACCTTTGAGCAATCGCAAATCTATTGAGCTCTTCAACCTCAAAGCCTTCCGCTCATACCATCCAGAAATTGGATATGAATCCCTCTCACAAAGGATTGTTCATTATGCAAAAGGCATCCCTTTAGTTTTGGTAGTATTGGGTTCATTTCTTCGTTCAAAAACTCCAAAGGAATGGGATAATGCATTGTCAAAACTAAAAAAGAGTCCCAATGAAGACATTCTAAAAGTTTTGAAATTGAGCTTTGATGGATTAAATTATGAAGAGAGGGAAATGTTCCTAGACATTGCATTTTTTTTGAAGGGTCAAGAGAAAGAACATGTGATAACACTATTAGAAAGCTTTGGTTTCCATGCGAGAATAGGGTTAGAAACCCTTGTAGATAGAACTCTTATAACTATTGATCAAAGCCAGGTACTCATGCATGACTTAGTAAAAGAAATGGGCTATGAAATTGTTCGTCAAGAATGTATTAAAGAACCTGGAAAACGAAGTAGATTATGTGATCCAGAAGAAGTCCATCATGTGTTGAAAAATAATACAGGAACTGATGCAATTGAAGGCATAGTGTTGGATCTGTCCAAGATTAGACATTTACACTTGAGCATTCACACCTTCAAAAAGATGTCTAATCTAAGATTTATAAAATTCTATTCGCTCAAGGATAGGAGATCTTGTAAGGTGGACCTGTCTTCTGGCCTTGAATTATTATCTGAGCAATTAAGGTACCTTCAATGGGATGGTTATCCTTTGGAGTCTCTACCATCTTCATTTTGCCCAGAGAAACTTGTTGAACTTTGCATGCGAAACAGCCAAGTCAAAAAACTTTGGGATGGAGTGCAGGATTTTGTGAACTTGAGGGGAATAAATCTTGCTGGATGCAAGCAATTAATAGAGCTACCTGATTTTTCGAAAGCACGGAATCTTAAATCGGTGGATCTTGAATCATGCGAAAGTTTGTGTGATGTTCACCCATCCATCTTATCTTTACAAAGGCTTGTTACTCTGAATCTTGAAAAATGCATTAAACTGAAGAAACTTCGTGGTGAGAATCCTCTACAGTCTCTCGAAGAGGTCCGTCTCAATTGGTGCTTTAGTTTGACAGAATTTTCATTGTCATCAGAACAAATCGCAAGTTTAGAACTAGAAACTACTCGCATTGAGATATTGGACTCATCAATTGGGCATCTCAGTAAACTTAAACAGTTCAGTCTTGATGGGTCAAGACTGAAGAGTCTTCCAATAAATGAGTTATGCTGTTTAAGATCTCTAAAGGAGCTACGGCTTTCTAATTGTGAACAAGTAATTGACAAACTGAAGCTGCATATGCTGTTTGATGCTTTGCGGTTTTTACAAAAACTACATTTGGATGGGTGTCGGAACTTAATTGAACTTCCTAGTAATATCAAGCATCTTTCAGGGCTAAAAGTTCTTTCTTTGAAGAATTGTGATAGACTACAATCTCTACCGGAGCTTCCACCATCCATCGAAGAATTAGATGCCACCGCCTGCCCGTCATTAGAGACAATAACTCTCACTTCTGAGATGGAATATTCATTGTCGCCAGAAGAAGGAACGGCGCCTTTAACACCCTGTTCCTCGCCTGGGTATCTTATGAAACTTAGAAAGCTTCGCCTTAATGTCTCAAGTCTGATGAATTTTTCAACTGAGCAGTTATGTTATTTGAGATCTCTTAAGGAACTTACTCTTCTTGATTGCGGACTAGTGATTGATAAGTTAAAGTTGCACAAGTTATTTGATGCCTTGTGCTCTTTGGTAGACTTTTATTTGGCAGGAAGTAGTAACTTGTATGAACTTCCTGACAACATCAACTCCTTATCATCATTATATCTATTGGGATTGGCAGGAAGCAATGTAGAGTACTTGCCTTCCGGTGTCAAGCATCTTCTGAAGCTAGACTACATTTACTTGACCGGTTGTAGGAGGCTTCGGTCTCTACTAGGACTCCCACCATTCACTAGATACGTAAAGGCCACTAATTGCTCATCACTGGAGGTTGCATTCCCTTTAACAACTTCTAGGCCGCTACGGAAATATCTGGTGGAGTCCCTTTTTCTTGAAAATTGCTTGAAGTTGGGGGCGCATTCACTTTCCTGTATTGAGGAATATGCTTATTTGTCGTTGAAGCGAGCAGCATATCTCAATCGACCTGGTGCTTTTTGTTACCCAGGGAGAAAAATTCCAGAGTGGGTTAGATATAACCAGGCAACTAAGGCTTCAAGTTTCATAACCCTTGAACTCTCTTCAGCTGTGAACAACTTTTTGGGCCTTGTTTTCTGCTCGGTTCTTCCTCAGTTCCCATCAAACCCAAACTGTCAGAGTTACCTGAAATGCCAAATATATTTTGAAGATGGTGAAGAAGTCAAAGGCGAGGTTGACGATATGTGGATAACAGAGTTAAATTCGCATCATGTTTTTCTATGGTATGATCCAATCTACTCTGTATGGATTTTAAGGGAACTTATAGAAAGAGAGGATGATCAAGGCATTAGAGGTAACCCTAAGCTTTCGTTTGAGTTTTCTGTTGTCTCTTATGATGAGAATTACCGTGCAACCAAACATGATTTGATAGAAGCATGTGGAGTTTGCCCAGTATATGCTTCAGAATATCACAGTTTCCTTCAACGGATGGAATATGGGTTGGATTTGGATAGCCAAAAAAAGAGTGGTTGTGATGATGATGAGCATTCGCTTAGTGGAACTGTGGAATATGCTAGTTTCTCATTGAAGCAAGTATATGGCAATTTTGAAGGAGTATATATTTCTTCGCCTGAAAGGCCGAATACTCCAGTGGGGTTTCTAGACAAAACCACAAATACCCGCTCAGTTTATTTTCAACTTCCACATTTTGATGACTTGTTGGGTTTCATTTTTTGTTTTGTTATTCCTCAATTCTCCGCAAAAGAAAAGGATCGAAGTCACTCAAGCTGTCGGTGCCAGTTTGATGCCGATAAAAGGCTCTCTGAAAGTCATTATTTTGAAGGCCCCAGAGGATGGCATTATTCGATGACAGAATTGAATTCGGGTAATGCCTTCCAATGGTATGATCCCCTCTTTTGTGAATTCATATTAGATCAAGTTAGAAGAAAAAGAGTTGGGGATGTGGTGTTGCTTTCATTTGAATTTGAGTTTGGTGATTACTTGATTGAAGAATGGGGAATTCACCCAATATATGCCTCAGAATATAACAGTTTCCTCCAACAAAAGGAATTGAAATTGGGGCTAGGCATGAAGAGACCTCGAGATACTTGTGATGAGGAAGAACTGCATGCTCTAACAAAGAAATTGAAGGCATCTTCTATTTATTCTACCAACATTGACGAGTTACTACTCTCACTGTCTGAATTGAATTTGGAATTCGCGAAGGATGGCACTCTACAAAAATAA 4725 0.4036 MTKMRRRRKSLRPKNLGRPRQLKRGMEVGLERKAMGRQSIRCSCEEGWRGESGRPAMNLDLIGCEECWPRGRVKSQSTLITASHLHHHFNIMAAAAASSSSSSSSSLPPKKHDVFLSFRGEDTRRTFTSHLFTALCKRGIRTYIDNELRKGDDISDSLIQAIKDSSIAMVIFSENYASSKWCLNELIQILWCKEVQGQLVFPVFYQIDPSDVRNQRRTYMEAFAKHERDFRLNQERVNKWRQALFITANLSGWDSRTFRDESELIQNIVNHVQQKINLSYPSSLMGLVGIDENCSEIERLLEKVPIIGIWGMGGIGKTTMAKALFTKLSFKFESSCFLENVREEVEKQGLTCVRNNLLFELMKEESFPYRPPNVASNASVMRRLSCKKVFIVLDDVSSWKQLEYLAPYCDYLGPGSKVIITTRHKQLLVIAAVNEIYEAQPLSNRKSIELFNLKAFRSYHPEIGYESLSQRIVHYAKGIPLVLVVLGSFLRSKTPKEWDNALSKLKKSPNEDILKVLKLSFDGLNYEEREMFLDIAFFLKGQEKEHVITLLESFGFHARIGLETLVDRTLITIDQSQVLMHDLVKEMGYEIVRQECIKEPGKRSRLCDPEEVHHVLKNNTGTDAIEGIVLDLSKIRHLHLSIHTFKKMSNLRFIKFYSLKDRRSCKVDLSSGLELLSEQLRYLQWDGYPLESLPSSFCPEKLVELCMRNSQVKKLWDGVQDFVNLRGINLAGCKQLIELPDFSKARNLKSVDLESCESLCDVHPSILSLQRLVTLNLEKCIKLKKLRGENPLQSLEEVRLNWCFSLTEFSLSSEQIASLELETTRIEILDSSIGHLSKLKQFSLDGSRLKSLPINELCCLRSLKELRLSNCEQVIDKLKLHMLFDALRFLQKLHLDGCRNLIELPSNIKHLSGLKVLSLKNCDRLQSLPELPPSIEELDATACPSLETITLTSEMEYSLSPEEGTAPLTPCSSPGYLMKLRKLRLNVSSLMNFSTEQLCYLRSLKELTLLDCGLVIDKLKLHKLFDALCSLVDFYLAGSSNLYELPDNINSLSSLYLLGLAGSNVEYLPSGVKHLLKLDYIYLTGCRRLRSLLGLPPFTRYVKATNCSSLEVAFPLTTSRPLRKYLVESLFLENCLKLGAHSLSCIEEYAYLSLKRAAYLNRPGAFCYPGRKIPEWVRYNQATKASSFITLELSSAVNNFLGLVFCSVLPQFPSNPNCQSYLKCQIYFEDGEEVKGEVDDMWITELNSHHVFLWYDPIYSVWILRELIEREDDQGIRGNPKLSFEFSVVSYDENYRATKHDLIEACGVCPVYASEYHSFLQRMEYGLDLDSQKKSGCDDDEHSLSGTVEYASFSLKQVYGNFEGVYISSPERPNTPVGFLDKTTNTRSVYFQLPHFDDLLGFIFCFVIPQFSAKEKDRSHSSCRCQFDADKRLSESHYFEGPRGWHYSMTELNSGNAFQWYDPLFCEFILDQVRRKRVGDVVLLSFEFEFGDYLIEEWGIHPIYASEYNSFLQQKELKLGLGMKRPRDTCDEEELHALTKKLKASSIYSTNIDELLLSLSELNLEFAKDGTLQK 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral449g00003 1574 Pfam C-JID domain 1168 1315 IPR045344 -
Pral449g00003 1574 PRINTS Disease resistance protein signature 476 490 - -
Pral449g00003 1574 PRINTS Disease resistance protein signature 383 397 - -
Pral449g00003 1574 PRINTS Disease resistance protein signature 306 321 - -
Pral449g00003 1574 PRINTS Disease resistance protein signature 909 925 - -
Pral449g00003 1574 SMART till_3 111 250 IPR000157 GO:0007165
Pral449g00003 1574 FunFam Disease resistance protein (TIR-NBS-LRR class) 108 278 - -
Pral449g00003 1574 Gene3D Ribonuclease Inhibitor 791 955 IPR032675 -
Pral449g00003 1574 Gene3D Ribonuclease Inhibitor 602 790 IPR032675 -
Pral449g00003 1574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 535 IPR027417 -
Pral449g00003 1574 ProSiteProfiles TIR domain profile. 110 276 IPR000157 GO:0007165
Pral449g00003 1574 MobiDBLite consensus disorder prediction 1 19 - -
Pral449g00003 1574 Pfam NB-ARC domain 304 511 IPR002182 GO:0043531
Pral449g00003 1574 Gene3D Ribonuclease Inhibitor 968 1214 IPR032675 -
Pral449g00003 1574 MobiDBLite consensus disorder prediction 1 26 - -
Pral449g00003 1574 SUPERFAMILY Toll/Interleukin receptor TIR domain 101 253 IPR035897 -
Pral449g00003 1574 SUPERFAMILY L domain-like 628 950 - -
Pral449g00003 1574 SUPERFAMILY L domain-like 884 1090 - -
Pral449g00003 1574 Gene3D - 276 435 IPR027417 -
Pral449g00003 1574 Pfam TIR domain 111 282 IPR000157 GO:0007165
Pral449g00003 1574 Pfam Leucine Rich Repeat 701 720 IPR011713 -
Pral449g00003 1574 Gene3D - 441 525 IPR042197 -
Pral449g00003 1574 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 112 810 IPR044974 GO:0006952
Pral449g00003 1574 Gene3D - 108 275 IPR035897 -
Pral449g00003 1574 SUPERFAMILY "Winged helix" DNA-binding domain 512 617 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral449g00003 Pral-Chr449 21040 27599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral449g00003 110 917 WRKY Transcription Factor Family AT4G12020 34.662 1.45e-112 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral449g00003 - - pcin:129289344 2085.46