Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4498g00005 ATGAGAGAGAGACAAACCGCTGTATCCAGGGTGACTCACCCACCCACAATCGTCGTCACCTTCCAGTTATTCTTCTTCTTCCAGCTCCTTTCCACCACCGCCTCCTACAATCCTGATGATCATTTCTCAGTCAACTGCGGTTATTCCGGCAATTCGTCTACTCTAGACGACCGGAACTGGACCGGAGACACAGATTTCGGACCGTTCTCCCCGATCGAACTCTCCAACAGCAATAAGTCATCAGTAGGCGACAACGCACCTGGCAAACCAATCCCTTACAGCACCGCACGCTTGTCTCGCTCTGAATTCTCCTACTCGTTTCCTGTGAAGACCGGCGGCCAAAAGTTTATTCGCCTCTACTTTTACCCATCTTCCTACGACCCCCACTTCCTTCACTCCGATGCTTTCTTCTCCGTCAAAGCAGGGCCTCACACCCTCCTTAAGGACTTCAACGCTTCACTTAACGCCGGCGCCGCCGCCGGCGCTTATCTTAAACATGCTGCCAGAGAACAAGGAGCCATCTTACGGGAGTACTGTGTCAACGTTGACTCAGGTCAGAGGCTGCACATAACCTTCACGCCCAACGAATCTTATCCAAACGCCTACGCTTTCGTCAACGGGATTGAGATCATCTCTATGCCCCCCTTTCTTTACTACACCAGACCTGATGACCCGCGATCTATGTGGCTAAGTGATGAAAACAAACAGTTTCCGGTCCAGAACAGCAATGCTCTGGAGACTCTGTACAGAGCTAATGTTGGCGGAAGTCGGATCGGTTCCAATAAAGACACAGGCATGTTTCGTTATTGGGACGTGGATAATGACTACTTGGAGAGGGAGCGATCGCGCAGTATTTCAGCAGGTTTTGGTTTGCATCTGGTGTATAGAGATGATCAAAATTATTTTGCACCTGATGACGTATACAGGACAGCCAGAAACTATGGGATGAACGAAACGTCCAAATTTAATGTGACTTGGGAATTTGAGGTTGACTCAGAGTTTTTTTATATGGTGAGATTGCATTTTTGCGAGTTTGATGAACACATTGAAAAAGCTGGAGACAGAGTTTTCCGAATCTTCATAAATGATGCTTTGGTGGAGTCTGTCGCTGATGTAATGTCGTGGACTAACCATCAGAGAAATGTTCCTGTGCATAGGGACTATGCGGCGTCGATGCAGGGCAAGGGGAGCTTGAAGAAGCTGAATCTCTCAATTAAGTTGCAACCAACCCCTACTGCGAGAAGCACTTACAGAGATGTTTTATTGAATGGTATTGAAATTTTGAAAATAAGTGACTACAATGATAATCTCGCGGGTCCTAATCCTAATCCACCTCCATCTCCCCCACTAACATTCTCAAAGTCATCAAAGAACGGAAACAAAGCAAAGGTAATTTCCATTATGGCTGGGGCAACATCAGGCTTCATCGCGCTGTCTCTTATTGTTCTGCTCATTTTCCTGCGATTCATTAGAGCTCCGGTCAAGGAAGGATCTTCATGGTGGGGAAAAAAATCGGTAGACTCGTCCAACAAAAACAAACCCCGCGGGTCATCATCATTACCGTCCGATTTGTGTCGCTACTTTTCTATAGATGAGATAAGAGCAGCCACAAGTAACTTCGACGATGTTTTCATTGTGGGGGTTGGAGGGTTTGGTAATGTCTATAAAGGCTATATTGATGACGGAACAGTCCCTGTGGCCATCAAACGGCTCAAACCAGGTTCCCAACAAGGCCTCCGTGAGTTCCAAACTGAGATCGAAATGCTCTCTCAGCTTCGTCACAATCATTTAGTTCCTCTCATTGGTTACTGCAACGATGGCAACGAGATGATCCTCGTTTACGAGTTCATGGCTCGTGGGGCCCTCCGTGACCATATTTATGATTCTGACAACCCTCCACTTTCCTGGAAACAAAGGCTGGCGATGTGCATTGGTGCGGCGCGTGGACTTCATTATCTTCATACTGGTGCGAACCGCAATATAATCCACCGTGATGTGAAATCCACAAATATCTTAATAGATGAGAAATGGGTGGCCAAGATTTCGGATTTTGGACTATCCAAGATAGGACCCACGGGGTTGTCCAAGTCTCACATAAGCACGGTGGTAAAAGGAAGTATGGGCTACTTGGACCCAGAATACTATAAACGTCAAAGGTTGACTGAAAAGTCTGACATTTACTCTTTTGGAGTTGTATTGCTGGAAGTATTGTGTGGGAGACCTCCTTTGATACGTAACGTGGAGAAGCAGAAGCTAAGTTTAGTGGAGTGGGTTCGAAAATGTCATCACGAGGGTGTGATCCATCAAGCGGTTGACCCGTTCCTGGTAGAAAGTATCACACCAGAGTGCTTAAAAGCGTTTAGCGACATGGCCCTGAAATGTTTGGTGGAAGATGGAAATGAACGACCTTCGATGAACGACGTCGTGTGGGGCCTAGAATTTGCGTTACAGCTTCAAGAAGGGACAGAGGAAGTGGGGCTTCTGGTTGATGAGGGCGAAATTGAAGGAAAGAGCGAGGAAAGGGCTCTGATAAGGAAAACGACAAATGTGGAAGAAAGAGAAAGCAAAGTGGGTTTCACGAGCAGTGATGAATCAAAAGGAAGCAGGTTGACTAGTTCAAGCAGTGAAGATCAATCTTTAGTTTCTGGATTGATCTTCTCCGAGTTGGGTCATCCATCGGTTCGATGA 2688 0.4669 MRERQTAVSRVTHPPTIVVTFQLFFFFQLLSTTASYNPDDHFSVNCGYSGNSSTLDDRNWTGDTDFGPFSPIELSNSNKSSVGDNAPGKPIPYSTARLSRSEFSYSFPVKTGGQKFIRLYFYPSSYDPHFLHSDAFFSVKAGPHTLLKDFNASLNAGAAAGAYLKHAAREQGAILREYCVNVDSGQRLHITFTPNESYPNAYAFVNGIEIISMPPFLYYTRPDDPRSMWLSDENKQFPVQNSNALETLYRANVGGSRIGSNKDTGMFRYWDVDNDYLERERSRSISAGFGLHLVYRDDQNYFAPDDVYRTARNYGMNETSKFNVTWEFEVDSEFFYMVRLHFCEFDEHIEKAGDRVFRIFINDALVESVADVMSWTNHQRNVPVHRDYAASMQGKGSLKKLNLSIKLQPTPTARSTYRDVLLNGIEILKISDYNDNLAGPNPNPPPSPPLTFSKSSKNGNKAKVISIMAGATSGFIALSLIVLLIFLRFIRAPVKEGSSWWGKKSVDSSNKNKPRGSSSLPSDLCRYFSIDEIRAATSNFDDVFIVGVGGFGNVYKGYIDDGTVPVAIKRLKPGSQQGLREFQTEIEMLSQLRHNHLVPLIGYCNDGNEMILVYEFMARGALRDHIYDSDNPPLSWKQRLAMCIGAARGLHYLHTGANRNIIHRDVKSTNILIDEKWVAKISDFGLSKIGPTGLSKSHISTVVKGSMGYLDPEYYKRQRLTEKSDIYSFGVVLLEVLCGRPPLIRNVEKQKLSLVEWVRKCHHEGVIHQAVDPFLVESITPECLKAFSDMALKCLVEDGNERPSMNDVVWGLEFALQLQEGTEEVGLLVDEGEIEGKSEERALIRKTTNVEERESKVGFTSSDESKGSRLTSSSSEDQSLVSGLIFSELGHPSVR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4498g00005 895 SMART serkin_6 540 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4498g00005 895 MobiDBLite consensus disorder prediction 861 879 - -
Pral4498g00005 895 MobiDBLite consensus disorder prediction 843 860 - -
Pral4498g00005 895 MobiDBLite consensus disorder prediction 502 520 - -
Pral4498g00005 895 FunFam FERONIA receptor-like kinase 41 214 - -
Pral4498g00005 895 FunFam Receptor-like protein kinase FERONIA 512 616 - -
Pral4498g00005 895 Pfam Malectin-like domain 44 429 IPR024788 -
Pral4498g00005 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Pral4498g00005 895 CDD STKc_IRAK 546 809 - -
Pral4498g00005 895 Gene3D Phosphorylase Kinase; domain 1 502 616 - -
Pral4498g00005 895 PANTHER OS03G0124300 PROTEIN-RELATED 19 495 IPR046957 GO:0004672
Pral4498g00005 895 MobiDBLite consensus disorder prediction 499 520 - -
Pral4498g00005 895 SUPERFAMILY Protein kinase-like (PK-like) 514 814 IPR011009 -
Pral4498g00005 895 MobiDBLite consensus disorder prediction 843 879 - -
Pral4498g00005 895 Gene3D - 243 431 - -
Pral4498g00005 895 Gene3D - 41 213 - -
Pral4498g00005 895 Gene3D Transferase(Phosphotransferase) domain 1 617 828 - -
Pral4498g00005 895 Pfam Protein tyrosine and serine/threonine kinase 546 809 IPR001245 GO:0004672|GO:0006468
Pral4498g00005 895 ProSitePatterns Protein kinases ATP-binding region signature. 546 569 IPR017441 GO:0005524
Pral4498g00005 895 FunFam Receptor-like protein kinase FERONIA 617 833 - -
Pral4498g00005 895 ProSiteProfiles Protein kinase domain profile. 540 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4498g00005 895 MobiDBLite consensus disorder prediction 436 455 - -
Pral4498g00005 895 FunFam FERONIA receptor-like kinase 243 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4498g00005 Pral-Chr4498 287209 290339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4498g00005 30 895 Receptor kinase-like Gene Family AT3G51550 44.896 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4498g00005 Malectin_like 1.2e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4498g00005 - - pcin:129293555 1254.2