Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4498g00002 ATGACTAACTCACGAACAAAGGCCATGCTTTTCCTCTTACTCTTCAGAATCCTCCTTTTCACTGTCTGCGTCATTTCCTACACTCCTGATGATAATTTTGCAGTCAATTGCGGTAGCTCCGGCAATTCTCCTTTTTTAGTTGGCCGGAGCTGGACTGGAGATATAGACTCAGAACAATTCTCTCCGATCAAATTCCCCAATAGCAACGACTCATCGGTAAGTGCCGAGGCGCCTTTCAAAACAACCCCTTACAATACCGCACGTGTCTCTCGCTCTAAAATCTCCTACTTGTTTCCATTGAAGACCCACGGCCAAAAGTTTATTCGCCTTTACTTTTACCCATTTTCTTACGACCTCAACTTCCTTCGCTCGGACTCGTTCTTCTCCGTCAGAGTTGGATCTCACACTCTTTTGAAAGACTTCAATGCTTCAGTCACCGCCGATGAGGCTGGGAAAGAAACCATTTTACAAGAGTACTGCGTCAACATTCATGACCCCGGCGAGGGGCTTATGATAACCTTCACGCCCAACGGATCTCATCCGAACGCCTATGCTTTTGTCAATGGCATCGAGGTTGTCTCTATGCCCGCCTTTCTTTATTACACAGACCAAGAAAACCAGCTGGCAGGGATGATGCTAGATGGTGGAATCCAGCAGTATCCAGTTCAGAACAGCCGTGCTCTCGAGACTATGTACAGAGCTAATGTTGGCGGAAGTCAGATTCCTCCAGATAAAGACACAGGCATGTATCGTTATTGGGACCAGGATAATGACTACTTGGCGAGGGAGCGAGCGCACAGTATTTCAGCAGGTTTTAATTTGCATCTAGTGTATAGAGATGATCAAAATTATTTTGCACCTGATGAAGTATACAGGACGGCCAGAAACTATGGGATGAACGAAACGTCCAAATTTAATGTGACTTGGGAATTTGAGGTTGATTCAGAGTTTTTTTATATGGTGAGATTGCATTTTTGCGAGTTTGATGAACAAATTGAAAAAGCTGGAGACAGAGTTTTCCAAATCTTCATAAATGATGTTTTGGTGGAGCCTGTCGCCGATGTGATGTTGTGGACTCAGAGTCAGAGGAATGTTCCTGTGCATAGGGACTATGCGGCGTCGATGCAGGGCAAGGGAAGCTTGAAGAAGCTGAATCTTTCAATTAAGTTGCAACCACACCCAACTGCGAGAAGCAGCTACAGAGATGTTTTATTGAATGGTATTGAAATTTTGAAAATAAGTGACTACAATGATAATCTTGGGGGTCCTAATCCTGATCCACCTCCATCTCCCCCACTAACATCCTCCAAGTCATCGAAGAACGGAAACAAAGCAAAGGTAATTTCCATTATCGTTGGGGCAACATCAGGCTTCATCGTGCTCTCTCTTATTGTTCTGCTCATTTTCCGGCGATTCATTAGAGCTCCGGTCAAGGAAGGATCTTCATGGTGGGGACAAAAATCAGTAGACTCATCCAATAAAAACAAACCCCGCGGGTCATCATCATTACCGTCCGATTTGTGTCGCTATTTTTCTATAGATGAAATAAGAGCAGCCACAAGTAACTTCGATGATATTTTCATTGTGGGGGTTGGAGGGTTTGGTAATGTCTATAAAGGCTATATTGATGACGGAACAGTCCCTGTGGCCATCAAACGGCTCAAACCAGGTTCCCAACAAGGCCTCCGTGAGTTCCAAACTGAGATCGAAATGCTCTCTCAGCTTCGTCACAATCATTTAGTTCCTCTCATTGGTTTCTGCAACGATGGCAACGAGATGATCCTCGTTTACGAGTTCATGGCTCGTGGGACCCTCCGTGACCATATTTATGATTCTGATAACCCTCCACTCTCCTGGAAACAAAGGTTGGCGATGTGCCTTGGTGCGGCGCGTGGCCTTCACTATCTCCATACTGGTGCGAACCGCAATATAATCCACCGTGATGTGAAATCCACAAATATCTTAATAGATGAGAAATGGGTGGCCAAGGTTTCGGATTTTGGACTATCCAAGATAGGACCCACGGGGTTGTCAAAGTCTCACATAAGCACGGTGGTAAAAGGAAGCATGGGTTACTTGGACCCAGAATACTACAAACGTCAAAGGTTGACTGAAAAGTCTGACGTTTACTCTTTCGGAGTTGTATTGCTGGAAGTATTGTGTGGGAGACCTCCTTTGATACGTAACGTGGAGAAGCAGAAACTAAGTTTAGTGGAGTGGGTTCGAAAATGTCATCACGAGGGTGTGATTCATCAAACGGTTGACCCGTTCCTGGTAGAAAGTATCACACCAGTGTGCTTAAAAGCGTTTAGCGACATGGCCCTGAAATGTTTGGCGGAAGATGGAAATGAACGACCTTCGATGAACGACGTCGTGTGGGGCTTAGAGTTTGCGTTGCAGCTTCAAGAAGGCACAGAGGAAGTGGGGCTTCTGGATCACGAGGGCAACATTGAAGGAAAGAGCGAGGAAAGGGCTCCGATAAGGAAAACGACAAATGTGGAAGAAAGAGAAAGCAAAGTGGGTTTCACGAGCAGTGATGAATCAAAAGGAAGCAGGTTGACTAGTTCAAGCAGTGAAGATCAATCTTTAGTTTCTGGATTGATCTTCTCTGAGTTGGGTCATCCATCGGTTCGATGA 2637 0.4528 MTNSRTKAMLFLLLFRILLFTVCVISYTPDDNFAVNCGSSGNSPFLVGRSWTGDIDSEQFSPIKFPNSNDSSVSAEAPFKTTPYNTARVSRSKISYLFPLKTHGQKFIRLYFYPFSYDLNFLRSDSFFSVRVGSHTLLKDFNASVTADEAGKETILQEYCVNIHDPGEGLMITFTPNGSHPNAYAFVNGIEVVSMPAFLYYTDQENQLAGMMLDGGIQQYPVQNSRALETMYRANVGGSQIPPDKDTGMYRYWDQDNDYLARERAHSISAGFNLHLVYRDDQNYFAPDEVYRTARNYGMNETSKFNVTWEFEVDSEFFYMVRLHFCEFDEQIEKAGDRVFQIFINDVLVEPVADVMLWTQSQRNVPVHRDYAASMQGKGSLKKLNLSIKLQPHPTARSSYRDVLLNGIEILKISDYNDNLGGPNPDPPPSPPLTSSKSSKNGNKAKVISIIVGATSGFIVLSLIVLLIFRRFIRAPVKEGSSWWGQKSVDSSNKNKPRGSSSLPSDLCRYFSIDEIRAATSNFDDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKPGSQQGLREFQTEIEMLSQLRHNHLVPLIGFCNDGNEMILVYEFMARGTLRDHIYDSDNPPLSWKQRLAMCLGAARGLHYLHTGANRNIIHRDVKSTNILIDEKWVAKVSDFGLSKIGPTGLSKSHISTVVKGSMGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPLIRNVEKQKLSLVEWVRKCHHEGVIHQTVDPFLVESITPVCLKAFSDMALKCLAEDGNERPSMNDVVWGLEFALQLQEGTEEVGLLDHEGNIEGKSEERAPIRKTTNVEERESKVGFTSSDESKGSRLTSSSSEDQSLVSGLIFSELGHPSVR 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4498g00002 878 Gene3D Phosphorylase Kinase; domain 1 485 599 - -
Pral4498g00002 878 FunFam FERONIA receptor-like kinase 32 196 - -
Pral4498g00002 878 FunFam Receptor-like protein kinase FERONIA 600 816 - -
Pral4498g00002 878 MobiDBLite consensus disorder prediction 483 503 - -
Pral4498g00002 878 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Pral4498g00002 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Pral4498g00002 878 SUPERFAMILY Protein kinase-like (PK-like) 497 797 IPR011009 -
Pral4498g00002 878 MobiDBLite consensus disorder prediction 813 843 - -
Pral4498g00002 878 MobiDBLite consensus disorder prediction 844 865 - -
Pral4498g00002 878 Gene3D - 226 414 - -
Pral4498g00002 878 Gene3D - 32 196 - -
Pral4498g00002 878 ProSiteProfiles Protein kinase domain profile. 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4498g00002 878 PANTHER OS03G0124300 PROTEIN-RELATED 11 482 IPR046957 GO:0004672
Pral4498g00002 878 MobiDBLite consensus disorder prediction 813 865 - -
Pral4498g00002 878 CDD STKc_IRAK 529 792 - -
Pral4498g00002 878 FunFam FERONIA receptor-like kinase 226 414 - -
Pral4498g00002 878 MobiDBLite consensus disorder prediction 484 503 - -
Pral4498g00002 878 Pfam Protein tyrosine and serine/threonine kinase 529 792 IPR001245 GO:0004672|GO:0006468
Pral4498g00002 878 Gene3D Transferase(Phosphotransferase) domain 1 600 811 - -
Pral4498g00002 878 SMART serkin_6 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4498g00002 878 FunFam Receptor-like protein kinase FERONIA 495 599 - -
Pral4498g00002 878 MobiDBLite consensus disorder prediction 419 441 - -
Pral4498g00002 878 Pfam Malectin-like domain 35 412 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4498g00002 Pral-Chr4498 163267 166168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4498g00002 22 878 Receptor kinase-like Gene Family AT3G51550 45.424 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4498g00002 Malectin_like 9e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4498g00002 - - pcin:129293555 1222.99