Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4497g00009 ATGTTGCCTTCTCTCCGCAAAGCTATCGGTATCAGCGCAGTCTCTCCTTCAACATTGCAACATCTGATTTGTGTTCAAACCCAGTGGTTTTCATCAAGGTATGCTTATTCAACCTCTTCCAATGGGCATTCTTTCACCTTCTCATATCTCATTGACACCTGTGGCTTGTCACCCAAACAAGCTGCTTCAGCTTCTAAGCGTGTCAGCTTCGAAACGCCGGATAAGCCTGATTTGGTTATCAATTTCCTTAAAAGTCATGGATTCTCTCAGCCCCAGATTGTTCGTTTCATTGCTGAGATCCCATCGTTTCTCCGATATGATCCTGAGAAAACCTTTCTGCCCAAAATTGAATTTTTCAAATCCAGAGGCGTTTCGAGCTCAGACATCCCTAGGCTCATATGTAGTTGTCCTAGAATCATGTCAAGAAGCTTAAGGAAGCAGCTCATTCCTTCCTTTGACTTCTTTCGAGATGTGTCTCAATCTGACGAGAAGCTTATTAAAACTCTTCAATATTGCTCGGGCATTCTTCTTAACGCCAACACAATTGCCCGGCCTAATATGGAGCTATTGCGAGAAGCAGGAGTTCCTGAATCAAATGTCATCAAATTGTTGCAAGTGTATCCTAGGACATTAACTGCAAGCCCTAATGTGTTTAAGGACATTGTAGAAGAAGTGAAGAATATAGGGATCAATCCTTTGAAGTATCAATTTCTTATGGCTATTCATGTATTCTTCTGTCTAAACAAATCCTCATTGGCAAAGAGAGCTGATGTTTATAAAAAGTGGGGTTGGTCTGACCATGACACTCTTGTGGCATTTAGAAAGTTCCCTCTCTGTATGGCAGCAGCAGAGGATAAGATCGATGCAATAATGGAGTTTCTTGTCCATAAATTGGGCTGTGAGTCTTCTACTACTAGCAAATATCCTACAGTTTTTACATTGAGCTTGAAAAGGCGAATAGTTCCGAGAGGTGCTGTCATTCAAGCTCTGTTGTCAAGGGGTCTAATGAAAAAGAAAACATTGTTTGCAACATTTGTATATAGTGAAAGTTATTTTCTGAGGAGGTTTCTCCTTTGTCAGGGGCAGGAAGCAACTCAATTATTAGAGTTGTATCAGTCTAAACTGGATCTTGCAAGGAAAATGAAGAATGGAAAGGTTTGA 1161 0.4083 MLPSLRKAIGISAVSPSTLQHLICVQTQWFSSRYAYSTSSNGHSFTFSYLIDTCGLSPKQAASASKRVSFETPDKPDLVINFLKSHGFSQPQIVRFIAEIPSFLRYDPEKTFLPKIEFFKSRGVSSSDIPRLICSCPRIMSRSLRKQLIPSFDFFRDVSQSDEKLIKTLQYCSGILLNANTIARPNMELLREAGVPESNVIKLLQVYPRTLTASPNVFKDIVEEVKNIGINPLKYQFLMAIHVFFCLNKSSLAKRADVYKKWGWSDHDTLVAFRKFPLCMAAAEDKIDAIMEFLVHKLGCESSTTSKYPTVFTLSLKRRIVPRGAVIQALLSRGLMKKKTLFATFVYSESYFLRRFLLCQGQEATQLLELYQSKLDLARKMKNGKV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4497g00009 386 FunFam Mitochondrial transcription termination factor-like 144 364 - -
Pral4497g00009 386 Pfam mTERF 207 352 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 Pfam mTERF 80 231 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 PANTHER CGI-12 PROTEIN-RELATED 41 359 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 SMART mt_12 166 196 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Pral4497g00009 386 Gene3D Transcription termination factor 3, mitochondrial 144 366 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4497g00009 Pral-Chr4497 56360 57892 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4497g00009 mTERF 7.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4497g00009 K15031 - qsa:O6P43_003532 366.696