Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4497g00008 ATGTTTTGCTTTCTGAGGAAAATCATCCTTTTTCGGAGGCATATCATCAACACAATCTCTCCCTCAACATCTCAGCAATTACTTTGCTTTCAAAGCCAATGTCTACCTGCCACTGCCAGGTACTGTAATTCAATTTCATCCAGCGAGCATTCTTTCACAGTCTCATATCTCATTGACACATGTGGCTTCTCACCCAAAGAAGCTGCTGGAGTTTCCAAGTATCTCAGCTTGGAAACGCGAGAAAAACCAGATACGGTTATCAATTTCTTGAAGAATCTCGGATTCTCAAAATCCCAGATTCTTCGTGTCACAAGACGAGTCCCCCAATGTCTTCGATCTCACCCTGAGAAAACCATACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGTTCAGACATCCCTAAGCTCTTATGTAGTTGTCCTAACATTATGAAAACAAGCTTAAATAAGCAGCTCATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTCAATCTGATGACAAGCTCATTAAAGCTCTTAAATCTTGCTCGGGCATTCTTATTGATATTAACACCCTTGCCGTGCCTAATATGAAGCTATTAAGAGAAGTCGAAGTTCCTGAATCAAACATAATCAAATTGTTGCAAATCTATCCTAAGACAGTGACTACAAGTACTGAAAAATTCAATATCATAGTGGAGCGAGTTCAGGAAATGGGGTTTGATCCTTTAAAGTTTCAATTTTGTATCGCCGTTTACGTATTGTCGTCGCTAAGCAAATCTACATGGTCAAAAAAGGCTAAGGTTTACAAGAAGTGGGGCTGGTCAGACAACGACATTCATGCTGCTTTCAGAAGTTTCCCATTTTGTATGAAGGCATCTGAGGATAAAATTGATGCAATAATGACGATTCTTGTTCAGAAATTGGGCTGTCCGCCTTCCACTATTCCCACTTATGCAGTAGTTCTGTCACTTAGTTTGAATAGACGAATTGTTCCACGGGCTTCTGTCATTCAAGTTTTGTTGTCAAAAGGTCTGGTGAAAAAGGAAAGATTGCTCTCAATATTTCTCTATACTGAAAGGGTGTTTTTGAGAAGATTGGTCATCAGTCATGAGGAAGAATGCAGTGAACTCCTGAAGCTTTATCAGGCTGAACTTGATCTTGCAAGGTGA 1161 0.3997 MFCFLRKIILFRRHIINTISPSTSQQLLCFQSQCLPATARYCNSISSSEHSFTVSYLIDTCGFSPKEAAGVSKYLSLETREKPDTVINFLKNLGFSKSQILRVTRRVPQCLRSHPEKTILPKIEFFISRGVSSSDIPKLLCSCPNIMKTSLNKQLIPSFDFFRDLFQSDDKLIKALKSCSGILIDINTLAVPNMKLLREVEVPESNIIKLLQIYPKTVTTSTEKFNIIVERVQEMGFDPLKFQFCIAVYVLSSLSKSTWSKKAKVYKKWGWSDNDIHAAFRSFPFCMKASEDKIDAIMTILVQKLGCPPSTIPTYAVVLSLSLNRRIVPRASVIQVLLSKGLVKKERLLSIFLYTERVFLRRLVISHEEECSELLKLYQAELDLAR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4497g00008 386 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 SMART mt_12 65 96 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 FunFam Mitochondrial transcription termination factor-like 151 371 - -
Pral4497g00008 386 Pfam mTERF 87 295 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 Pfam mTERF 253 359 IPR003690 GO:0003690|GO:0006355
Pral4497g00008 386 Gene3D Transcription termination factor 3, mitochondrial 188 377 IPR038538 -
Pral4497g00008 386 Gene3D Transcription termination factor 3, mitochondrial 49 187 IPR038538 -
Pral4497g00008 386 PANTHER CGI-12 PROTEIN-RELATED 48 368 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4497g00008 Pral-Chr4497 50281 51469 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4497g00008 mTERF 9.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4497g00008 K15031 - qsa:O6P43_003531 365.925