Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4497g00007 ATGTTTTGTTTTCTCCGCAAAACAATCCCTTTCCGAAGGCTTATTGTTTTCAGCACAATTTCTCCGGAGACTATACTTCCGGAATTGCTTTTTTTTCAACGCCAATGGTTATCTGCGAGGTACTGTAATTCAGTCGCATCAAATAGGCATTCTTTCACTGTCTCGTATCTCATTGACACATGTGGCTTCTCACCACAAGAAGCTGCTTCAGTTTCTAAGCTCGTCAGCTTCGAATCGCGAGATAAGCCAGATTTGGTTATCAATTTCTTCAAGAGTCAAGGACTCACTAAACCCCAGATTCATCGTTTTGTTAGAGAGCTCCCAAGACTTCTTCGATCAGATCCTCAGAAAACCTTAGTGCCCAAGATTGAGTTTCTTGTATCCAATGGCGTTTCGATCTCAGACATCCCTAAGCTCCTATGTAGTTGCCCTAGCATCATGGTGAGAAGCTTAAGTAAGCAGATCATTCCTTCCTTTCATTTCTTTCGAGATTTGTTTCAATCTGACGCCAAACTCATTCAAGTTGTCACAAATTTCTCGGGTATTCTTCTTGATTTAAACAGCCGTTCCATGCCTAATATGAAGTTGTTAAGAGAAGCAGGAGTTCCTGAATCAAATGTCATAAAACTGTTACAATATTTTCCTTCGGTAATAACCAAAAGTTGTGTTCGATTTGAGGAGATTGTGAAGGAAGTGAAGGAACTGGGTGTTAATCCTGGGCAGGTAAACTTTGTTTTGGCCGTTTCTGTATTGGCATCAGCAAGCAAATCCACTTGGGGAAAAAAAGTTGATGTTTATAAGAAGTGGGGTTGGTCGGAGGATGACATTCTTGCAGCATTTAGGAAGTATCCATTCATCATGAAGGCATCAAAAGATAAGATCGATGCAGTGATGGATTTTTTGGTCAACAAATTAGGATGTGAATCTTCCATCGTTGCTAAATATCCAGGGGTTATCTCGTTCAGTATGAAGCGGAGATTTTTGCCAAGAGGTGCTGTGATTAAGATTTTATTGTCTAAGGGTCTCGTGCAAAAGGAGAGCTTGCCACTGCTATTTATGTACCCTGAAAGCACGTTTCTGAGAAGGTTTATCATGAGTAACCTGAAGGAGGAAGCTACTCAATTATTGAAGCTGTATCAGGGCAAATTGAAGCTGGCAAGGTGA 1164 0.4081 MFCFLRKTIPFRRLIVFSTISPETILPELLFFQRQWLSARYCNSVASNRHSFTVSYLIDTCGFSPQEAASVSKLVSFESRDKPDLVINFFKSQGLTKPQIHRFVRELPRLLRSDPQKTLVPKIEFLVSNGVSISDIPKLLCSCPSIMVRSLSKQIIPSFHFFRDLFQSDAKLIQVVTNFSGILLDLNSRSMPNMKLLREAGVPESNVIKLLQYFPSVITKSCVRFEEIVKEVKELGVNPGQVNFVLAVSVLASASKSTWGKKVDVYKKWGWSEDDILAAFRKYPFIMKASKDKIDAVMDFLVNKLGCESSIVAKYPGVISFSMKRRFLPRGAVIKILLSKGLVQKESLPLLFMYPESTFLRRFIMSNLKEEATQLLKLYQGKLKLAR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4497g00007 387 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 SMART mt_12 242 272 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 Gene3D Transcription termination factor 3, mitochondrial 168 372 IPR038538 -
Pral4497g00007 387 PANTHER CGI-12 PROTEIN-RELATED 48 367 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 FunFam Mitochondrial transcription termination factor-like 151 371 - -
Pral4497g00007 387 Pfam mTERF 185 359 IPR003690 GO:0003690|GO:0006355
Pral4497g00007 387 Pfam mTERF 87 306 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4497g00007 Pral-Chr4497 45105 47481 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4497g00007 mTERF 6.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4497g00007 K15031 - qsa:O6P43_003531 343.199