Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4494g00004 ATGACGTCTGGTACCAGGCTACCAACCTGGAGGGAGAGGGAAATCAACAAGAGGAGAGAGAGGAGGCGAAGAGCCATAGCGGCGAAGATCTTCTCTGGTGTGAGAATGTATGGCAACTACAAGCTCCCCAAGCACTGCGACAACAATGAAGTCTTGAAGGCTCTCTGCAATGAGGCTGGTTGGACTGTTGAACCTGACGACTCCCCTTTAGGTGTTCTAAGTAGGAGTAGGTTTGCTATTCCTGTCTGTAAGTGGACTTCGTATGGAACTCCCACCGATGTGATGAGGACCATATGTATTCTGCTTAATTTATATTTGATATATATGTTATGTGTGTTTTAA 342 0.4591 MTSGTRLPTWREREINKRRERRRRAIAAKIFSGVRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDDSPLGVLSRSRFAIPVCKWTSYGTPTDVMRTICILLNLYLIYMLCVF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4494g00004 113 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 66 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pral4494g00004 113 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 66 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4494g00004 Pral-Chr4494 63639 66654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4494g00004 1 66 BZR Transcription Factor Family AT1G78700 90.909 1.55e-24 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pral4494g00004 BES1_N 2.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4494g00004 - - pop:18109687 115.931