Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4494g00003 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGCTTCGCTTTGAAAGCTTTCACGCACTATGGATCTAATGCTCAACTCATACCAGAAGAAGAAGTGAAAGTTCTGAAAACAATATCATCGAAGATAGAGAACTTGAATTGGAATGCGACCCCACATTCTTGTATCGATGGAGGCTTCAAAAATAAAGCCATTAGCACAACGAATGGCTTCATAAGGAATGTAACGTGCAATTGTAGTTTTTCAAATGGAAAAGTTTGTCATGTTACAAATGTCATTGCCAACCATCTCAATTTATCTGGACTTTTACCAAGTGAATTTGGATTCCTTACCCATCTGCAAGAACTTGATTTGTCTTACAATTATCTAAATGGATCAATCCCAAGAAGCTTTGCTAGACTCCCTCTTGTTCATTTACTCCTTATAGCTGACCCAATCAGTGGTCCAATTCCAGACGAAATTGGTGAAATTACAACTTTAGAGAATTTAGATTTGAGGGATAATCTATTGGAAGGGACTCTTCCTTCTAGTCTCGGAAAATTGACAAAGCTACGCATATTGGATCTTTCTGGAAATAACTTCTTAGGAGCAATACCCGAAAGTTTTGGTAATCTGAAAAAACTAGAATATATTTATTTGGACGGGACCAATATATCAGGAAAATTACCCAATTTTATTGGGAATTGGACTCACCTTAAAGCATTCTCTTTGCAGGGAACAGCCTTGGAAGGCCCCATTCCCACAACCATATCTCACTTAACAAATTTGTTTTCTCTGAGTATATCTTATTTGCATGGCCCAGCAATAATGAGATTTCCTAATCTGGAGAATTTGACGTCCTTGCAATACCTGGTGTTGAGAAATTGCTCTATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATCTAGGCTAGATTTGAGCTTCAACAACTTGATCGGTGAAATCCCAAACAATATAGGAAAGTTGACCTTCCTAACTTCCATGATTCTAACTGAAAATTCTCTTACTGGGGAAATTCCTGATTGGATATTGCAGCAGCAAAGCAATTATAGTTCTGTTGATTTATCTTACAACAAATTTTTGAAGACTAATGTGACTGCTTGTCAGTATGGAATAATAAACTTGGGTTCTAGTCTATCACCTCTAGCAAGCACCTCTTGCTTGCGTACTTGCCTAAAAAGGGGCCTTTCTTGTGGAGGAGAACCCAAGTATCATTCATTGTTCATAAATTGTGGAGGAGCAGAGATTGAATATGAGGGGAATAAATATGAAGGAGACAACAATCCTGATGGTGCCTCATACTTTTTTGCTAGTGAAGATAAATGGGCTTCTAGCAGCACAGGAGTAGATAGCCATGATAGTTACTTAGCAACAAACATATCTTCCCTCAACATTACTGGTCCTATCTTCTACCTAACAGCTCGCCTTTCCCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATCAGTGGAAATTACAAAGTCAAGCTATATTTTGCTGAGATTGTGTATTCTTATGACCAAAATTTCCATCACATTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAACTATTTGCATGATTTCAACATTATGAAGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTGATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTACTGGGCTGGAAAAGGAACTACCTCTATTCCTTATGATAATGGTGTACATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATCTCAAAAGTCCTTCGATTTCTGGTGGAGCCATTGCTGGAATTATAGTTGGATCATGTGTGTTCTTCATCATACTAATAGTAATAATATTCGTCCTCCAAAAAATGGGCTTACTAGGTGGCAGCGATTCAAAAGACAAACAACTTTTGGATTTAAAGACGGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGATCAGTGTACAAGGGTATACTTTCAAATGGTGTTGTCATGGCAGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAGCTTTATGGATGTTGCGTTGAAGGAAACCAATTGTTGCTGATATATGAGTACATGGAGAACAATTGTCTGGCTAGTGCTCTTTTTGGTGGCCAAGGACAAAAGATGCACTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGGGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCATAGAGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCGGATTTTGGATTAGCCAAACTTAATGAAGATGAGAATACTCATATCAGCACAAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATGCTTGACTGAAAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTAGAAATCGTTAGTGGAAAAAGCAATACAAGTTACAGGCCAAAAGAGGAGTTTGTTTACCTTCTTGACTGGGCTTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTGGTGGATCCACGTCTTGGTTCAAGCTACTCCTCACAAGAAGTCATGAGAATGTTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTGAGGCCATCCATGGCCTCTGTTGTTTGCATGCTTGAAGGAAAGTTGTCAATCCAAGCCCTAACAATCAAAGGTCGAGAGAATGACAAACAGGTTGCCAGATTCAAGGCCTTGGAGATACAATCATCTCAAGAAAGCCATACCCAAACCTTCTGTTCTTCTTCTACATCAAAATCACATGAAAATGTGAAGCAAAGGATTGAAGCAACGGATAGTTAATGGATGGCTCAATGAATTGATTCCTCAGTTTCTCTTCCGTGTGATAAAGATTTCTCTTCATTCGGTAGGCTTCTCAAGAATTCCAACTTTGTATAA 3096 0.3847 MEFGISISKLLYLFLFGCFALKAFTHYGSNAQLIPEEEVKVLKTISSKIENLNWNATPHSCIDGGFKNKAISTTNGFIRNVTCNCSFSNGKVCHVTNVIANHLNLSGLLPSEFGFLTHLQELDLSYNYLNGSIPRSFARLPLVHLLLIADPISGPIPDEIGEITTLENLDLRDNLLEGTLPSSLGKLTKLRILDLSGNNFLGAIPESFGNLKKLEYIYLDGTNISGKLPNFIGNWTHLKAFSLQGTALEGPIPTTISHLTNLFSLSISYLHGPAIMRFPNLENLTSLQYLVLRNCSIHDSIPNYIGKMENLSRLDLSFNNLIGEIPNNIGKLTFLTSMILTENSLTGEIPDWILQQQSNYSSVDLSYNKFLKTNVTACQYGIINLGSSLSPLASTSCLRTCLKRGLSCGGEPKYHSLFINCGGAEIEYEGNKYEGDNNPDGASYFFASEDKWASSSTGVDSHDSYLATNISSLNITGPIFYLTARLSPLSLKYHGLCMISGNYKVKLYFAEIVYSYDQNFHHIGRRIFDVSIQGRNYLHDFNIMKEAGGVGKGIVKDFDVDVNDNTLEIHLYWAGKGTTSIPYDNGVHGPLISAISVTPNLKSPSISGGAIAGIIVGSCVFFIILIVIIFVLQKMGLLGGSDSKDKQLLDLKTGYFSLKQIKDATNNFAPENKIGEGGFGSVYKGILSNGVVMAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNCLASALFGGQGQKMHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLNEDENTHISTRIAGTIGYMAPEYAMRGCLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDPRLGSSYSSQEVMRMLELALLCTNPSPTLRPSMASVVCMLEGKLSIQALTIKGRENDKQVARFKALEIQSSQESHTQTFCSSSTSKSHENVKQRIEATDSXWMAQXIDSSVSLPCDKDFSSFGRLLKNSNFV 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4494g00003 1031 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 743 - -
Pral4494g00003 1031 SUPERFAMILY Protein kinase-like (PK-like) 652 940 IPR011009 -
Pral4494g00003 1031 Gene3D Ribonuclease Inhibitor 206 272 IPR032675 -
Pral4494g00003 1031 Pfam Malectin domain 417 595 IPR021720 -
Pral4494g00003 1031 Gene3D Ribonuclease Inhibitor 273 381 IPR032675 -
Pral4494g00003 1031 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 373 - -
Pral4494g00003 1031 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
Pral4494g00003 1031 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515
Pral4494g00003 1031 SMART LRR_typ_2 308 332 IPR003591 -
Pral4494g00003 1031 SMART LRR_typ_2 187 210 IPR003591 -
Pral4494g00003 1031 SMART LRR_typ_2 116 139 IPR003591 -
Pral4494g00003 1031 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Pral4494g00003 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Pral4494g00003 1031 Gene3D Transferase(Phosphotransferase) domain 1 744 966 - -
Pral4494g00003 1031 ProSiteProfiles Protein kinase domain profile. 668 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4494g00003 1031 SMART serkin_6 668 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4494g00003 1031 FunFam Leucine-rich repeat receptor protein kinase EMS1 109 200 - -
Pral4494g00003 1031 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 414 600 - -
Pral4494g00003 1031 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 979 - -
Pral4494g00003 1031 CDD STKc_IRAK 674 941 - -
Pral4494g00003 1031 Gene3D - 415 601 - -
Pral4494g00003 1031 Pfam Protein tyrosine and serine/threonine kinase 671 936 IPR001245 GO:0004672|GO:0006468
Pral4494g00003 1031 Gene3D Phosphorylase Kinase; domain 1 638 743 - -
Pral4494g00003 1031 SUPERFAMILY L domain-like 89 372 - -
Pral4494g00003 1031 Gene3D Ribonuclease Inhibitor 52 205 IPR032675 -
Pral4494g00003 1031 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Pral4494g00003 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4494g00003 Pral-Chr4494 41763 51640 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4494g00003 1 1019 Receptor kinase-like Gene Family AT1G53440 54.493 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4494g00003 PK_Tyr_Ser-Thr 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4494g00003 - - gmx:100817368 1211.05