Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4494g00001 ATGGGCTTACTAGGTGACAGACGTTCAAAAGACAAACAACTTTTAGATTTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCTAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGCACAAGGTAAATTGGTTACAGGGTATACTATCAAATGGAGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAACTTTATGGATGTTGCGTTGAAGAAAACCAATTGCTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGAGCTCTTTTTGGTGGTCAAGGACAAAAGATACATTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCAATGCGAGGACACTTAACTGAGAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCAAGCCTTGGTTCAAGCTACTCCTTACAGGAAGTCACGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGGCCATCCATGTCCTCTGTTGTTGACATGCTTGAAGGAAAGTTGCCAATCCAAACCCTAGCAACCAAACGTCAGGAGAGTGACCAACAAGTTGCCAAATTCAAGGCCTTTGAGATACAATTATCTCAAGAAAGCTATAGCCAAATCTTTAGTTCTTCTTCTATATCAAGATCACACGAAAATGTGAAGTAA 1089 0.3866 MGLLGDRRSKDKQLLDLKTGYFSLKQIKDATNNFALENKIGEGGFGPVHKVNWLQGILSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEENQLLLIYEYMENNSLARALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYIAPEYAMRGHLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSLQEVTRMLELALLCTNPSPTLRPSMSSVVDMLEGKLPIQTLATKRQESDQQVAKFKAFEIQLSQESYSQIFSSSSISRSHENVK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4494g00001 362 ProSiteProfiles Protein kinase domain profile. 34 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4494g00001 362 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 5 114 - -
Pral4494g00001 362 SUPERFAMILY Protein kinase-like (PK-like) 18 311 IPR011009 -
Pral4494g00001 362 SMART serkin_6 34 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4494g00001 362 PIRSF TyrPK_CSF1-R 116 362 - -
Pral4494g00001 362 PIRSF TyrPK_CSF1-R 31 124 - -
Pral4494g00001 362 Gene3D Phosphorylase Kinase; domain 1 4 114 - -
Pral4494g00001 362 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 347 - -
Pral4494g00001 362 FunFam Putative LRR receptor-like serine/threonine-protein kinase 115 322 - -
Pral4494g00001 362 Gene3D Transferase(Phosphotransferase) domain 1 115 339 - -
Pral4494g00001 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pral4494g00001 362 CDD STKc_IRAK 40 312 - -
Pral4494g00001 362 Pfam Protein tyrosine and serine/threonine kinase 36 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4494g00001 Pral-Chr4494 422 3400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4494g00001 15 359 Receptor kinase-like Gene Family AT1G53430 75.504 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4494g00001 PK_Tyr_Ser-Thr 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4494g00001 - - gmx:100815226 553.132