Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00062 ATGCAAAAGTTGTGCAGAATGGAGGATGATTTTGATACCGGGAAAATCAGAAACATATGTATATTGGCACATGTTGATCATGGAAAGACTACACTGGCTGATCATTTGATTGCTGCTTCAGGGGGTGGCCTACTTCATCCAAAATTGGCTGGACGAATTAGGTTCATGGACTATCTTGATGAGGAACAAAGGAGGGCCATCACCATGAAGAGCTCTTCCATTGCTCTTCATTATAAAGACTACTCTATTAACCTCATAGATTCCCCTGGTCATATGGACTTTTGTAGTGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCATTAATTTTGGTTGATGCTGTTGAAGGCGTGCATATTCAAACCCACGCTGTGTTGCGGCAGTGTTGGATTGAGAAGCTCTCACCATGCTTGGTTCTTAACAAGATTGATAGGTTGATTAGTGAATTGAAGTTAAGTCCCATGGAAGCCTATATTCGGTTATTACGGATTGTGCATGAGGTCAATGGGATAATTAGTACATATAAGTCTGAGAAATATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCAGGCGATGTGACTGTTGATGAAAACATTGACCTCATAGAAGATGACGATGAAGATATGTTTCAACCGCAGAAAGGGAATGTGGGATTTGTGTGCGCACTAGATGGTTGGGGATTCAGAGTTCATGAGTTTGCTGAATTTTATGCTTCAAAATTGGGGGCTAGTGTTACCGCATTGCAAAAAGCCTTGTGGGGTCCTCGGTATTTCAATTCCAAAACTAAAATGATTGTTGGTAAGAAAGGTGTAGGTGGGGGAAGTAAGGCGAGGCCAATGTTTGTCCAATTTGTTCTTGAACCACTATGGCAGGTATACCAGGGAGCTCTAGAGGGTGATGGTGACAAAGGAATGCTTGAGAAAGTCATTAAGTCATTCAATTTGTCTATACCATCTCGTGAATTGCAAAATAAAGACCCTAAGCTTGTGCTTCAAGCTGTTATGAGTCGGTGGCTTCCTCTTTCAGATACAATCTTATCAATGGTGGTAAAGTGTATGCCAGATCCAGCATCTGCCCAGTCGTTTCGTATCTCACGTCTTCTCCCAAAGAGAGAGGTTCTTGATAATGGGGTTGATCAGAATGTGCTTGCTGAGGCAGAGCTTGTTAGAAAATCAGTGGAGGAATGTGATTGGAAACCTGAAGCTCCATGTGTTGCTTTTGTCTCGAAAATGTTTGCCGTGCCAATTAAAATGCTTCCTGATAGGGGTTCATACACGGAGGTCGTGAACTATTCTGGTGATGGAGAGGGTGAATCTGATGAGTGTTTCTTGGCATTTGCTAGGATATTTAGTGGAACTTTGTCTGCAAGACAGAAAGTTTTTGTCCTTTCAGCTTTGTATGATCCGCTAAAAGGGGAACAAATGCAAAAGCATGTTCAAGAGGCTGAACTACAATCTTTGTATCTAATGATGGGCCAAGGCTTGAAAGTAGTGACGTCTGCTAAAGCAGGAAATATTGTTGCTATTCGAGGCCTTGGCCAACATATCCTGAAAAGTGCTACGCTCTCATCTAGCAAGAATTGTTGGCCTTTCTCTGGCATGGCTTTCCAGGTTGCCCCAACTTTAAGAGTTGCAATTGAGCCATCTGACCCTGCGGAAATCAGTGCATTATTGAAAGGCTTGAGGCTTCTAAATAGAGCAGACCCATTTGTTGAGGTCACTGTATCTGCAAGAGGGGAACATGTCTTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAAAGATTTGCTAAGGTAAGCTTAGAAGTCTCTCCACCTCTTGTGTCTTACAAAGAGACCATTGAAGGAGAAGTGTCTAGCATGCTTGAAAATTTGAAAGCTCTTAGTAAGAACTCAGATTATGTTGAAAAAACAACACCAAATGGTAGATGTGTTGTACGTGTGCATGTGATGAAACTTCCATCTTCTCTAACAAAGGTACTTGATGATAGTTCTGATGTATTGGGGGATGTCATTGGAATAAAGTCTGGCCATCCTGTTAAAAATTTGGATTCTCAGAGGTCAGGTATTCATGAAATTGATAATCCAACTGCACTGCTAAAAAAACGCATAATGGATGCTTTGGAGAGTGAAATTTTGAGCAAGAATGAGAATGACGAGGATTATGTTGACAAATGCAAGACAAAGTGGTTAAAACTTTTGAGAAGGATATGGGCACTTGGACCTAGGCAAATTGGTCCCAACATTCTCTTCACTCCTGACGTCAAAGCTGAGAGTAGTGACGGCTCTATTCTAATAAGTGGTGATTGTCATGTGTCTGAAAGAGTGGGTTTTGCTGATGATTCTAGTACTTCTAATGCAGAGGCTGAGACACCCTCAAATGTGAATGAAGCATTAGACATGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGATTCCAACTGGCCACTGCAGCTGGACCCTTATGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCATACATTTATCCCCATTTAGGGCAGAATGATGAACCTGAAGCACACCAACAATCTGAGCAATATGGCATATTTGCTGGACAAATAATCACAACTGTGAAAGATGCTTGTAGAGCAGCTGTGCTTCAGAATAGGCCACGGCTTGTGGAAGCAATGTACTTTTGTGAGTTGAATACCCCTACTGAATATTTGGGTCCCATGTATGCTGTACTTGCCCGAAGACGGGCCAGAGTTCTAAAGGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACTGTGCATGCATATTTGCCTGTTTCCGAAAGTTTCGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGAGCTGCTAGTGTGCTTCTTGTACTCAGTCACTGGGAAGCACTTAATGAGGACCCTTTCTTTGTACCTAAAACTGAAGAGGAAATAGAAGAGTTTGGAGACGGCTCCAGCGTGCTTCCTAATACAGCAAGAAAGTTAGTTAATGCAGTCAGACGCCGTAAGGGCCTTCATGTGGAGGAAAAAATAGTACAGCATGGAACAAAGCAGAGGACACGAGCTCGTAAGGTCTGA 3102 0.4255 MQKLCRMEDDFDTGKIRNICILAHVDHGKTTLADHLIAASGGGLLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYIRLLRIVHEVNGIISTYKSEKYLSDVDSILAGPSGDVTVDENIDLIEDDDEDMFQPQKGNVGFVCALDGWGFRVHEFAEFYASKLGASVTALQKALWGPRYFNSKTKMIVGKKGVGGGSKARPMFVQFVLEPLWQVYQGALEGDGDKGMLEKVIKSFNLSIPSRELQNKDPKLVLQAVMSRWLPLSDTILSMVVKCMPDPASAQSFRISRLLPKREVLDNGVDQNVLAEAELVRKSVEECDWKPEAPCVAFVSKMFAVPIKMLPDRGSYTEVVNYSGDGEGESDECFLAFARIFSGTLSARQKVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSKNCWPFSGMAFQVAPTLRVAIEPSDPAEISALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFAKVSLEVSPPLVSYKETIEGEVSSMLENLKALSKNSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDVLGDVIGIKSGHPVKNLDSQRSGIHEIDNPTALLKKRIMDALESEILSKNENDEDYVDKCKTKWLKLLRRIWALGPRQIGPNILFTPDVKAESSDGSILISGDCHVSERVGFADDSSTSNAEAETPSNVNEALDMEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIYPHLGQNDEPEAHQQSEQYGIFAGQIITTVKDACRAAVLQNRPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPFFTVHAYLPVSESFGFADELRRWTSGAASVLLVLSHWEALNEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVNAVRRRKGLHVEEKIVQHGTKQRTRARKV 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00062 1033 CDD aeEF2_snRNP_like_IV 613 898 - -
Pral4490g00062 1033 CDD EF2_snRNP_III 542 613 - -
Pral4490g00062 1033 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 14 216 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 Gene3D - 7 209 IPR027417 -
Pral4490g00062 1033 NCBIfam small GTP-binding protein domain 15 146 IPR005225 GO:0005525
Pral4490g00062 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 356 IPR027417 -
Pral4490g00062 1033 FunFam Elongation factor like GTPase 1 890 1025 - -
Pral4490g00062 1033 Gene3D - 637 888 IPR014721 -
Pral4490g00062 1033 CDD EF2 17 240 - -
Pral4490g00062 1033 Gene3D Yeast translation eEF2 (G' domain) 232 341 - -
Pral4490g00062 1033 FunFam Elongation factor like GTPase 1 232 341 - -
Pral4490g00062 1033 Pfam Elongation factor Tu domain 2 446 524 IPR004161 GO:0005525
Pral4490g00062 1033 Pfam Elongation factor G C-terminus 892 976 IPR000640 -
Pral4490g00062 1033 Coils Coil 619 639 - -
Pral4490g00062 1033 SUPERFAMILY Translation proteins 396 534 IPR009000 -
Pral4490g00062 1033 Gene3D Translation factors 358 539 - -
Pral4490g00062 1033 SUPERFAMILY EF-G C-terminal domain-like 540 614 IPR035647 -
Pral4490g00062 1033 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 13 1032 - -
Pral4490g00062 1033 SUPERFAMILY EF-G C-terminal domain-like 894 993 IPR035647 -
Pral4490g00062 1033 PRINTS GTP-binding elongation factor signature 64 72 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 PRINTS GTP-binding elongation factor signature 18 31 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 PRINTS GTP-binding elongation factor signature 136 145 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 PRINTS GTP-binding elongation factor signature 100 111 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 PRINTS GTP-binding elongation factor signature 84 94 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 Gene3D Elongation Factor G (Translational Gtpase), domain 3 541 617 - -
Pral4490g00062 1033 FunFam Elongation factor 2-like protein 7 220 - -
Pral4490g00062 1033 Pfam Elongation factor Tu GTP binding domain 15 356 IPR000795 GO:0003924|GO:0005525
Pral4490g00062 1033 FunFam Translation elongation factor 2 541 617 - -
Pral4490g00062 1033 SUPERFAMILY Ribosomal protein S5 domain 2-like 616 893 IPR020568 -
Pral4490g00062 1033 CDD eEF2_snRNP_like_C 894 973 - -
Pral4490g00062 1033 CDD EF2_II 405 527 - -
Pral4490g00062 1033 Gene3D - 890 1024 - -
Pral4490g00062 1033 SMART EFG_C_a 891 980 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00062 Pral-Chr4490 804417 820026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00062 9 1033 Eukaryotic Initiation Factors Gene Family AT3G22980 71.872 0.0 1520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00062 K14536 - cave:132164150 1615.9