Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4490g00062 | ATGCAAAAGTTGTGCAGAATGGAGGATGATTTTGATACCGGGAAAATCAGAAACATATGTATATTGGCACATGTTGATCATGGAAAGACTACACTGGCTGATCATTTGATTGCTGCTTCAGGGGGTGGCCTACTTCATCCAAAATTGGCTGGACGAATTAGGTTCATGGACTATCTTGATGAGGAACAAAGGAGGGCCATCACCATGAAGAGCTCTTCCATTGCTCTTCATTATAAAGACTACTCTATTAACCTCATAGATTCCCCTGGTCATATGGACTTTTGTAGTGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCATTAATTTTGGTTGATGCTGTTGAAGGCGTGCATATTCAAACCCACGCTGTGTTGCGGCAGTGTTGGATTGAGAAGCTCTCACCATGCTTGGTTCTTAACAAGATTGATAGGTTGATTAGTGAATTGAAGTTAAGTCCCATGGAAGCCTATATTCGGTTATTACGGATTGTGCATGAGGTCAATGGGATAATTAGTACATATAAGTCTGAGAAATATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCAGGCGATGTGACTGTTGATGAAAACATTGACCTCATAGAAGATGACGATGAAGATATGTTTCAACCGCAGAAAGGGAATGTGGGATTTGTGTGCGCACTAGATGGTTGGGGATTCAGAGTTCATGAGTTTGCTGAATTTTATGCTTCAAAATTGGGGGCTAGTGTTACCGCATTGCAAAAAGCCTTGTGGGGTCCTCGGTATTTCAATTCCAAAACTAAAATGATTGTTGGTAAGAAAGGTGTAGGTGGGGGAAGTAAGGCGAGGCCAATGTTTGTCCAATTTGTTCTTGAACCACTATGGCAGGTATACCAGGGAGCTCTAGAGGGTGATGGTGACAAAGGAATGCTTGAGAAAGTCATTAAGTCATTCAATTTGTCTATACCATCTCGTGAATTGCAAAATAAAGACCCTAAGCTTGTGCTTCAAGCTGTTATGAGTCGGTGGCTTCCTCTTTCAGATACAATCTTATCAATGGTGGTAAAGTGTATGCCAGATCCAGCATCTGCCCAGTCGTTTCGTATCTCACGTCTTCTCCCAAAGAGAGAGGTTCTTGATAATGGGGTTGATCAGAATGTGCTTGCTGAGGCAGAGCTTGTTAGAAAATCAGTGGAGGAATGTGATTGGAAACCTGAAGCTCCATGTGTTGCTTTTGTCTCGAAAATGTTTGCCGTGCCAATTAAAATGCTTCCTGATAGGGGTTCATACACGGAGGTCGTGAACTATTCTGGTGATGGAGAGGGTGAATCTGATGAGTGTTTCTTGGCATTTGCTAGGATATTTAGTGGAACTTTGTCTGCAAGACAGAAAGTTTTTGTCCTTTCAGCTTTGTATGATCCGCTAAAAGGGGAACAAATGCAAAAGCATGTTCAAGAGGCTGAACTACAATCTTTGTATCTAATGATGGGCCAAGGCTTGAAAGTAGTGACGTCTGCTAAAGCAGGAAATATTGTTGCTATTCGAGGCCTTGGCCAACATATCCTGAAAAGTGCTACGCTCTCATCTAGCAAGAATTGTTGGCCTTTCTCTGGCATGGCTTTCCAGGTTGCCCCAACTTTAAGAGTTGCAATTGAGCCATCTGACCCTGCGGAAATCAGTGCATTATTGAAAGGCTTGAGGCTTCTAAATAGAGCAGACCCATTTGTTGAGGTCACTGTATCTGCAAGAGGGGAACATGTCTTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAAAGATTTGCTAAGGTAAGCTTAGAAGTCTCTCCACCTCTTGTGTCTTACAAAGAGACCATTGAAGGAGAAGTGTCTAGCATGCTTGAAAATTTGAAAGCTCTTAGTAAGAACTCAGATTATGTTGAAAAAACAACACCAAATGGTAGATGTGTTGTACGTGTGCATGTGATGAAACTTCCATCTTCTCTAACAAAGGTACTTGATGATAGTTCTGATGTATTGGGGGATGTCATTGGAATAAAGTCTGGCCATCCTGTTAAAAATTTGGATTCTCAGAGGTCAGGTATTCATGAAATTGATAATCCAACTGCACTGCTAAAAAAACGCATAATGGATGCTTTGGAGAGTGAAATTTTGAGCAAGAATGAGAATGACGAGGATTATGTTGACAAATGCAAGACAAAGTGGTTAAAACTTTTGAGAAGGATATGGGCACTTGGACCTAGGCAAATTGGTCCCAACATTCTCTTCACTCCTGACGTCAAAGCTGAGAGTAGTGACGGCTCTATTCTAATAAGTGGTGATTGTCATGTGTCTGAAAGAGTGGGTTTTGCTGATGATTCTAGTACTTCTAATGCAGAGGCTGAGACACCCTCAAATGTGAATGAAGCATTAGACATGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGATTCCAACTGGCCACTGCAGCTGGACCCTTATGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCATACATTTATCCCCATTTAGGGCAGAATGATGAACCTGAAGCACACCAACAATCTGAGCAATATGGCATATTTGCTGGACAAATAATCACAACTGTGAAAGATGCTTGTAGAGCAGCTGTGCTTCAGAATAGGCCACGGCTTGTGGAAGCAATGTACTTTTGTGAGTTGAATACCCCTACTGAATATTTGGGTCCCATGTATGCTGTACTTGCCCGAAGACGGGCCAGAGTTCTAAAGGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACTGTGCATGCATATTTGCCTGTTTCCGAAAGTTTCGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGAGCTGCTAGTGTGCTTCTTGTACTCAGTCACTGGGAAGCACTTAATGAGGACCCTTTCTTTGTACCTAAAACTGAAGAGGAAATAGAAGAGTTTGGAGACGGCTCCAGCGTGCTTCCTAATACAGCAAGAAAGTTAGTTAATGCAGTCAGACGCCGTAAGGGCCTTCATGTGGAGGAAAAAATAGTACAGCATGGAACAAAGCAGAGGACACGAGCTCGTAAGGTCTGA | 3102 | 0.4255 | MQKLCRMEDDFDTGKIRNICILAHVDHGKTTLADHLIAASGGGLLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYIRLLRIVHEVNGIISTYKSEKYLSDVDSILAGPSGDVTVDENIDLIEDDDEDMFQPQKGNVGFVCALDGWGFRVHEFAEFYASKLGASVTALQKALWGPRYFNSKTKMIVGKKGVGGGSKARPMFVQFVLEPLWQVYQGALEGDGDKGMLEKVIKSFNLSIPSRELQNKDPKLVLQAVMSRWLPLSDTILSMVVKCMPDPASAQSFRISRLLPKREVLDNGVDQNVLAEAELVRKSVEECDWKPEAPCVAFVSKMFAVPIKMLPDRGSYTEVVNYSGDGEGESDECFLAFARIFSGTLSARQKVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSKNCWPFSGMAFQVAPTLRVAIEPSDPAEISALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFAKVSLEVSPPLVSYKETIEGEVSSMLENLKALSKNSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDVLGDVIGIKSGHPVKNLDSQRSGIHEIDNPTALLKKRIMDALESEILSKNENDEDYVDKCKTKWLKLLRRIWALGPRQIGPNILFTPDVKAESSDGSILISGDCHVSERVGFADDSSTSNAEAETPSNVNEALDMEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIYPHLGQNDEPEAHQQSEQYGIFAGQIITTVKDACRAAVLQNRPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPFFTVHAYLPVSESFGFADELRRWTSGAASVLLVLSHWEALNEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVNAVRRRKGLHVEEKIVQHGTKQRTRARKV | 1033 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4490g00062 | 1033 | CDD | aeEF2_snRNP_like_IV | 613 | 898 | - | - | |
Pral4490g00062 | 1033 | CDD | EF2_snRNP_III | 542 | 613 | - | - | |
Pral4490g00062 | 1033 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 14 | 216 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | Gene3D | - | 7 | 209 | IPR027417 | - | |
Pral4490g00062 | 1033 | NCBIfam | small GTP-binding protein domain | 15 | 146 | IPR005225 | GO:0005525 | |
Pral4490g00062 | 1033 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 8 | 356 | IPR027417 | - | |
Pral4490g00062 | 1033 | FunFam | Elongation factor like GTPase 1 | 890 | 1025 | - | - | |
Pral4490g00062 | 1033 | Gene3D | - | 637 | 888 | IPR014721 | - | |
Pral4490g00062 | 1033 | CDD | EF2 | 17 | 240 | - | - | |
Pral4490g00062 | 1033 | Gene3D | Yeast translation eEF2 (G' domain) | 232 | 341 | - | - | |
Pral4490g00062 | 1033 | FunFam | Elongation factor like GTPase 1 | 232 | 341 | - | - | |
Pral4490g00062 | 1033 | Pfam | Elongation factor Tu domain 2 | 446 | 524 | IPR004161 | GO:0005525 | |
Pral4490g00062 | 1033 | Pfam | Elongation factor G C-terminus | 892 | 976 | IPR000640 | - | |
Pral4490g00062 | 1033 | Coils | Coil | 619 | 639 | - | - | |
Pral4490g00062 | 1033 | SUPERFAMILY | Translation proteins | 396 | 534 | IPR009000 | - | |
Pral4490g00062 | 1033 | Gene3D | Translation factors | 358 | 539 | - | - | |
Pral4490g00062 | 1033 | SUPERFAMILY | EF-G C-terminal domain-like | 540 | 614 | IPR035647 | - | |
Pral4490g00062 | 1033 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 13 | 1032 | - | - | |
Pral4490g00062 | 1033 | SUPERFAMILY | EF-G C-terminal domain-like | 894 | 993 | IPR035647 | - | |
Pral4490g00062 | 1033 | PRINTS | GTP-binding elongation factor signature | 64 | 72 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | PRINTS | GTP-binding elongation factor signature | 18 | 31 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | PRINTS | GTP-binding elongation factor signature | 136 | 145 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | PRINTS | GTP-binding elongation factor signature | 100 | 111 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | PRINTS | GTP-binding elongation factor signature | 84 | 94 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 541 | 617 | - | - | |
Pral4490g00062 | 1033 | FunFam | Elongation factor 2-like protein | 7 | 220 | - | - | |
Pral4490g00062 | 1033 | Pfam | Elongation factor Tu GTP binding domain | 15 | 356 | IPR000795 | GO:0003924|GO:0005525 | |
Pral4490g00062 | 1033 | FunFam | Translation elongation factor 2 | 541 | 617 | - | - | |
Pral4490g00062 | 1033 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 616 | 893 | IPR020568 | - | |
Pral4490g00062 | 1033 | CDD | eEF2_snRNP_like_C | 894 | 973 | - | - | |
Pral4490g00062 | 1033 | CDD | EF2_II | 405 | 527 | - | - | |
Pral4490g00062 | 1033 | Gene3D | - | 890 | 1024 | - | - | |
Pral4490g00062 | 1033 | SMART | EFG_C_a | 891 | 980 | IPR000640 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4490g00062 | Pral-Chr4490 | 804417 | 820026 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4490g00062 | 9 | 1033 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 71.872 | 0.0 | 1520 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4490g00062 | K14536 | - | cave:132164150 | 1615.9 |