Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00059 ATGTCTAATCAAACTACTCTTCAAGGAGGGCCATCAATATTTGAAATTGATCAACGTACAAATCTTGGACGTGAAGTAATTCGAGCTCTGCTTTTGGAAGGTCAAGGTGATGAACTTACGATCTATGTCTCAAGAAGCCGATTTGAATACATGTTTGGAGAAGTAGAAGGAGGAGAAGGGGAAGACGAGGACGACGATGAAGAAATAGCAGACGAAGAGAATGGCGGCGGCGAAAATCATCGAAGGTCAGTAGAAAATTTAGAGAAGGTCGAGATTCAAGAGTCTACAATGTGCTCGATATGTCTGGATGGGATTACTCCGTCGAGTGAAACAGACGAAGAAGAAGACAAAGGAGCAGCTGGAATTCCCTGTGGTCATGTGTACCACCACAAGTGTATCTTCAAGTGGCTCCTCAAGCAGCAAACTTGCCCTTTGTGTCGCTACAAGATTACAAGCTAA 459 0.4379 MSNQTTLQGGPSIFEIDQRTNLGREVIRALLLEGQGDELTIYVSRSRFEYMFGEVEGGEGEDEDDDEEIADEENGGGENHRRSVENLEKVEIQESTMCSICLDGITPSSETDEEEDKGAAGIPCGHVYHHKCIFKWLLKQQTCPLCRYKITS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00059 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 152 IPR013083 -
Pral4490g00059 152 ProSiteProfiles Zinc finger RING-type profile. 98 147 IPR001841 -
Pral4490g00059 152 SMART ring_2 98 146 IPR001841 -
Pral4490g00059 152 MobiDBLite consensus disorder prediction 56 84 - -
Pral4490g00059 152 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 79 149 - -
Pral4490g00059 152 MobiDBLite consensus disorder prediction 56 73 - -
Pral4490g00059 152 SUPERFAMILY RING/U-box 86 151 - -
Pral4490g00059 152 Pfam Ring finger domain 97 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00059 Pral-Chr4490 765109 765567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00059 84 150 C3H Transcription Factor Family AT1G14200 40.541 5.67e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00059 - K22378 mdm:103438877 69.707