Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00044 ATGGTGAAGGAACAGCAAGGAGAGCGCGTCAGGCTCTATGTAAGAGGCACCATTCTTGGATACAAGAGGTCGAAGTCGAACCAGTACCCCAACACATCTCTGATCCAAATTGAGGGAGTGAACACCAAAGAAGAGGTAGCTTGGTATTGTGGCAAGAGAATGGCATATATCTATAAGGCCAAGGTTAAGAAGAATGGGACTCATTATCGCTGCATCTGGGGTAAAGTGACCAGGCCACATGGTAACAGTGGTGTCGTAAGAGCCAAATTCAAGTCAAACTTGCCTCCCAGATCGATGGGAGCTAGGGTAAGAGTATTCATGTACCCAAGCAATATATGA 339 0.4631 MVKEQQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00044 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Pral4490g00044 112 FunFam 60S ribosomal protein L35a 6 112 - -
Pral4490g00044 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Pral4490g00044 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Pral4490g00044 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pral4490g00044 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pral4490g00044 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00044 Pral-Chr4490 622522 625129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00044 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 89.286 3.65e-73 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00044 K02917 - nnu:104593384 229.18