Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00036 ATGTTAAAGGAAGTAGTTGAACTTGACTTGTCGAGCAACCATCTCTCTGGTAATATCCCTGCCACCATAGGAAATATGACCAATTTACACCATCTTTACCTTTTTTCCAATCAAATCTCAGGATCCATCCCATGGGAAGTAGGGAAACTCTACTCTATGGAGACATTGCATTTATCAGAGAACAATATATTAGGTTCAATCCCATCCTCTATTTGGAAGTTGGCTAATCTAAGCAACTTCTATGTTTATCAAAATAACCTTTCTGGATATATTCCTTCTAGTATTGGAAACTTGACAAGGCTCTCCATCCTAGCATTGGGACGAAACAATCTTTTAGGATTTGTTCCTTCTAGTATTGGAAATTTGACAGAGCTCACCTATATAAATTTGTGTGGAAACAAACTTAGTGGCAACCTTCCATCAGAAATGAATAACTTGAGGAAATTAGGATCCTTGCAAATTGGAGAAAATAGTTTCGAAGGTCATTTCCCTCAAGACATCTGCATGGGAGGATTGCTTGATATGATCAGTGCACATAGGAATCATTTCACCGGTCCAATTCCTAGAAGTTTGAGGAACTGCTCTAGCCTTATTAGAGTTAGGCTTGAAAGTAATCAATTGACAGGAAATATCACAGATGCTTTTGGTGTATGTCCACACTTAAACTACATTGATTTAAGTAACAATGCACTTTATGGCCACTTGTCACCCACATGGGGGCAGTGCCATAACCTTACAAGCTTCAAGATCTCAAATAATAACTTATCTGGCGGCATACCAATAGAGCTAAGTGAGGCAACAAAGTTACAGCAACTTCACTTTTCATCAAATCACTTGACAGGAAATATTCCAAGGGAATTGAGTCGCTTGTCATTATTGAGTGAACTTAGGCTGAGCAATAATCAACTTTCAAGAAACATTCCTATTGAGATAGGATTGTTGACAAAACTTGAACAGTTAAGTCTAGCTAACAATCACTTAAGTGGCTCAATTCCAGAACAACTGGGAGGGTTGACCAAATTATGGGAATTGAACATAAGTGGAAATAAGTTCTTCAGCATTCCCATTACTTTTGGTCGATTGCAACAGCTTCAGTCTCTTGATCTTAGTGGAAATTCATTTACCGGCAGAATCCCAACAATGCTTGGAGAGCTACAACGATTGGAAAAGTTGAACCTCTCATGTAACAATTTCTCTGGAATGATTCCTTCATTTTTTGATGATTTGAAAAGCTTGACTATGATTGACATATCACACAATAAATTAGAAGGTCCACTTCCAAATATTTCAGCCTTTCGTGCAGCTACAATGGGGAGATTAATAGGCAACAAAGGATTATGTGGTAATCTATCTGGCCTACCAATTTGCCCAACAACAAATTTTGACCCAAGCCATTCCAAGAGTAGGAAAGTGGTGGTCTATGTTGTATCCTTTAGTTTGGGAGCTGTGATGCTAGCAACATTTTTCGCTGGCATTTCATATATTATTTTCCATCACAAAGCAAGGAAAACAGAAAGTCAAGAAAGAGAAGTGCAAACTCAAAATTTGTTTGCTATATGGAGTTATGATGGGAAATTAGTATATGAAAACATTATTGAAGCCACGGAGGAGTTCAATGAAAAATATCTCATTGGGGAGGGAGGATTTGGAAGTGTCTATAAAGCAGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGCTTCATTCAGTACCAGCCAGGGATATGTGTCATCAAAAAGATTTTATGAGTGAGATTAGAGCCTTGACAGAAACTAGGCATCATAATATCATCAAGCTATATGGGTTTTGCTGGCATTCAAAAGTCTCTTTTTTGGTTTATGAATTCTTAGAAGGAGGCAGCTTGGACAAGATACTAAGAGAAGAGACACAAGCAATTGCTTTGGATTGGACTAAAAGAATCAAAGTTGTTGAAGGTATGGCTAATGCTTCATGCTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACCTATCAAGCAAAAATGTTATTTTAGATTCAGATTATGAGGCTCATATCTCTGACTTTGGGGCATCCAAGCTTTTATATCCAGATTCTACCAATTGGACCTCATTTGCTGGCACCTTTGGCTATGCCGCTCCAGAACTTGCTTACACAATGGAAGTGACGGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTCTGGAAACAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCATGTTTCTCATTAACATCTTCTAGTGCAGCACCAACAATAGTTGCTCATGATTTGGATTTAAAGGGAGTGTTAGACCAAAGGCTCCCTTATCCTCGAGGCTTAGTGGCTGAGAAGGTGATGTTGATTGCAAGAATTGCTTCTACTTGCTTGAATGAAAATCCACGTGCTCGCCCAACCATGGAGCAAGTATGTAAGGAGCTTGCCATGCCAAAATCACATTTCTCTGGTTCCATTCCATAG 2478 0.3882 MLKEVVELDLSSNHLSGNIPATIGNMTNLHHLYLFSNQISGSIPWEVGKLYSMETLHLSENNILGSIPSSIWKLANLSNFYVYQNNLSGYIPSSIGNLTRLSILALGRNNLLGFVPSSIGNLTELTYINLCGNKLSGNLPSEMNNLRKLGSLQIGENSFEGHFPQDICMGGLLDMISAHRNHFTGPIPRSLRNCSSLIRVRLESNQLTGNITDAFGVCPHLNYIDLSNNALYGHLSPTWGQCHNLTSFKISNNNLSGGIPIELSEATKLQQLHFSSNHLTGNIPRELSRLSLLSELRLSNNQLSRNIPIEIGLLTKLEQLSLANNHLSGSIPEQLGGLTKLWELNISGNKFFSIPITFGRLQQLQSLDLSGNSFTGRIPTMLGELQRLEKLNLSCNNFSGMIPSFFDDLKSLTMIDISHNKLEGPLPNISAFRAATMGRLIGNKGLCGNLSGLPICPTTNFDPSHSKSRKVVVYVVSFSLGAVMLATFFAGISYIIFHHKARKTESQEREVQTQNLFAIWSYDGKLVYENIIEATEEFNEKYLIGEGGFGSVYKAELSTGQVVAVKKLHSVPARDMCHQKDFMSEIRALTETRHHNIIKLYGFCWHSKVSFLVYEFLEGGSLDKILREETQAIALDWTKRIKVVEGMANASCYLHHGCSPPIVHRDLSSKNVILDSDYEAHISDFGASKLLYPDSTNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALETIMGKHPRDLIMSCFSLTSSSAAPTIVAHDLDLKGVLDQRLPYPRGLVAEKVMLIARIASTCLNENPRARPTMEQVCKELAMPKSHFSGSIP 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00036 825 SMART LRR_typ_2 2 26 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 122 146 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 385 408 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 314 337 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 338 360 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 98 121 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 290 313 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 50 74 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 409 432 IPR003591 -
Pral4490g00036 825 SMART LRR_typ_2 361 384 IPR003591 -
Pral4490g00036 825 Pfam Protein kinase domain 539 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00036 825 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
Pral4490g00036 825 Gene3D Ribonuclease Inhibitor 174 460 IPR032675 -
Pral4490g00036 825 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 1 95 - -
Pral4490g00036 825 FunFam MDIS1-interacting receptor like kinase 2 617 819 - -
Pral4490g00036 825 Gene3D Phosphorylase Kinase; domain 1 497 616 - -
Pral4490g00036 825 FunFam Leucine-rich repeat receptor protein kinase MSP1 501 616 - -
Pral4490g00036 825 SUPERFAMILY L domain-like 177 448 - -
Pral4490g00036 825 Pfam Leucine rich repeat 363 422 IPR001611 GO:0005515
Pral4490g00036 825 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 147 460 - -
Pral4490g00036 825 PANTHER LEUCINE RICH REPEAT KINASE 2 95 820 - -
Pral4490g00036 825 SUPERFAMILY Protein kinase-like (PK-like) 520 813 IPR011009 -
Pral4490g00036 825 ProSiteProfiles Protein kinase domain profile. 538 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00036 825 Gene3D Transferase(Phosphotransferase) domain 1 617 821 - -
Pral4490g00036 825 ProSitePatterns Tyrosine protein kinases specific active-site signature. 662 674 IPR008266 GO:0004672|GO:0006468
Pral4490g00036 825 Gene3D Ribonuclease Inhibitor 1 89 IPR032675 -
Pral4490g00036 825 Gene3D Ribonuclease Inhibitor 90 173 IPR032675 -
Pral4490g00036 825 SUPERFAMILY L domain-like 2 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00036 Pral-Chr4490 531928 534808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00036 2 710 Receptor kinase-like Gene Family AT4G08850 45.251 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4490g00036 Pkinase 9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00036 - - qsa:O6P43_026950 921.768