Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00035 ATGGCTAATGCTTCATACTATCTTCACTATGGATACTCACCTCCAATAGTTCATCATGACATATCAAGCAAAAATGTTATTTTAGACTTGGATTATGAGGCTCATATCTCTGACTTTGGGACAGCCAAGCTTTTGCATCCAGATTCTAACAATTGGACCTCATTTGTTGGTACCTTTGGCTATGCTGTTCTAGAACTTGCTTACACAATGGAAGTGACGAAGAAATGTGACATTTATAGCTTTGGAGTATTGGCTTTGGAAATAATTATGAGAAAGCATCCAAGAGATCTCTTAATGTTGTGCTTCTCATCAGCATCTTCTAGTACAACGCCGACAATAGTTGCTCACAATTTGGATTTGAAGCAAGTATTAGATCAAAGGCTACCTTATCCTCAAGCTCAATGGCTGAGAAGGTGA 417 0.3837 MANASYYLHYGYSPPIVHHDISSKNVILDLDYEAHISDFGTAKLLHPDSNNWTSFVGTFGYAVLELAYTMEVTKKCDIYSFGVLALEIIMRKHPRDLLMLCFSSASSSTTPTIVAHNLDLKQVLDQRLPYPQAQWLRR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00035 138 Pfam Protein kinase domain 8 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00035 138 ProSitePatterns Tyrosine protein kinases specific active-site signature. 16 28 IPR008266 GO:0004672|GO:0006468
Pral4490g00035 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00035 138 PANTHER LEUCINE RICH REPEAT KINASE 2 1 133 - -
Pral4490g00035 138 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Pral4490g00035 138 SUPERFAMILY Protein kinase-like (PK-like) 6 97 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00035 Pral-Chr4490 493219 493774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00035 1 128 Receptor kinase-like Gene Family AT5G49660 40.299 1.57e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4490g00035 Pkinase 2.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00035 - - pcin:129319550 188.348