Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00033 ATGGCAACAATAGTTGATAAGCCTATAAGTTATGGAAATGTTGAAAGAGAGAGCATGCAGAGGACATTTATGAGACAGTTAGAAGAGACAGATAAATGTCGTGATGTTATTCGTATGGGATCACAAGCATTTCTACAATTATGTGCCAAACTTAGAAACAGTGGTAGAGTTGAAGATTCTAGAAATGTTAAGGTTGAAGAGCAGGCCGAATATCTCGTCCAACCTTCTGGCTTAGAAGTTCCTTTGGAAATTCTTACTAATCAAAGATTCTACCTATATTTTAAGAAAAAACCAAATGCAAGAAAGTGGAAAAATACCCCAGTATTACATTATGATAAGTTGTATGAGTTGTTTAGTGCGAATAGGGCAATCGGAAAATACTCCAAATGTCCCAAGGAAAGGGTCGCACAATGGGATCAAGAGGTCAATCAATTAAATAACTCTATTGTAGGTGCAACTAATGTTGAGATTGAATGTGATTTTCCAAATAATTCACCAGACTCACAAGTTAATTTGGACTATAGCCCAACATGTGGGGCATCGGTAGCAACTATATCAACTAGAGGACAAAAGCGTAAGGCTTCAATGGATTCGTCTATTGAAGAAAGGTGTAAGAAAATAACAGTAGGAATAAAGGAACTAGTTGATGTCATACGAGATGGCAATGTTGTTACCGAGAAGCATGCTCAAATTGCTAAGAAACATGTTGAAATAGCTGAAAAAGACATAGAAGGGCAAACTCAAAATTTGTTTGCCATATGGAGTTATGATGGGAAATTAGTATATGAAAACATTATTGAAGCCACAGAGGAGTTCAACGAAAAATATCTCATTGGAGAGGGAGGATCTGGAAGTGTCTACAAAGCAGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGCTTTATTCAGTACCAGACAAGGATATGTGTCATCAAAAAGCTTTTATGAGTGAGATTAGGGCCTTAACAGAAACTAGGCATCATAATATCATCAAGCTATATGGGTTTTGCTGGCATTCAAAGGTCTCATTTTTGGTTTATGAATTCTCTGAAGGAGGCAGCTTGGACAAGATACTAAGTGAAGAGACACAAGCAATTGCATTGGATTGGACTAAAAGAATCAAAGTTGTTGAAGGTGTGGCTAATGCTTCATACTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACTTATCAAGCAAAAATGTTATTTTAGACTCAGATTATGAGGCACATATCTCTGACTTTAGGACATCCAAGCTTTTGTATCCAGATTCTACCAATTGGACCTCATTTGCTGGCACCTTTGGCTATGCTGCTCCAGAACTTGCTTACTCAAAGCAAGTTACCGAGAAATGTGACGTCTATAGCTTTGGAGTGTTGGCTCTGGAAATAATCATGGGAAAGCATCCAAGAGATCTCATAATGTCATGTTTCTCATCAACATCTTCTAGTGCAACACCAACAACACACTACTACAAAAAATACATTTAA 1503 0.3759 MATIVDKPISYGNVERESMQRTFMRQLEETDKCRDVIRMGSQAFLQLCAKLRNSGRVEDSRNVKVEEQAEYLVQPSGLEVPLEILTNQRFYLYFKKKPNARKWKNTPVLHYDKLYELFSANRAIGKYSKCPKERVAQWDQEVNQLNNSIVGATNVEIECDFPNNSPDSQVNLDYSPTCGASVATISTRGQKRKASMDSSIEERCKKITVGIKELVDVIRDGNVVTEKHAQIAKKHVEIAEKDIEGQTQNLFAIWSYDGKLVYENIIEATEEFNEKYLIGEGGSGSVYKAELSTGQVVAVKKLYSVPDKDMCHQKAFMSEIRALTETRHHNIIKLYGFCWHSKVSFLVYEFSEGGSLDKILSEETQAIALDWTKRIKVVEGVANASYYLHHGCSPPIVHRDLSSKNVILDSDYEAHISDFRTSKLLYPDSTNWTSFAGTFGYAAPELAYSKQVTEKCDVYSFGVLALEIIMGKHPRDLIMSCFSSTSSSATPTTHYYKKYI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00033 500 Pfam Protein kinase domain 273 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00033 500 ProSitePatterns Tyrosine protein kinases specific active-site signature. 396 408 IPR008266 GO:0004672|GO:0006468
Pral4490g00033 500 PANTHER LEUCINE RICH REPEAT KINASE 2 219 489 - -
Pral4490g00033 500 ProSiteProfiles Protein kinase domain profile. 272 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00033 500 SUPERFAMILY Protein kinase-like (PK-like) 256 476 IPR011009 -
Pral4490g00033 500 ProSitePatterns Protein kinases ATP-binding region signature. 278 301 IPR017441 GO:0005524
Pral4490g00033 500 Gene3D Transferase(Phosphotransferase) domain 1 352 495 - -
Pral4490g00033 500 FunFam Leucine-rich repeat receptor protein kinase MSP1 234 350 - -
Pral4490g00033 500 Gene3D Phosphorylase Kinase; domain 1 226 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00033 Pral-Chr4490 300130 344102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00033 251 444 Receptor kinase-like Gene Family AT4G08850 55.838 2.88e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4490g00033 Pkinase 4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00033 - - pcin:129319550 370.933