Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00012 ATGGCGTCCAAAGATCCTCCACCATCTTTGGAGATACTAGTTCGGACGCCCGATAGCTTCTCAATCTGGGGTGGACCTCCCTTTCCCAATGCTCAACCTGGTGTCAAGCTTGACAAAGTCTCTTGTTTGAATGCGAAATTCTGTGATAATGGGTCTAGACTTATGGTCATGAAGACTAACTCTGTTATTACGGTATATGATTGCGCAAACTTTCAAGAGATTAGATCCTTTGAGATACCTAATGTTGCTGCTGCCGTCTTGTCCCCTTGTGGGACTTATTTGCTGACCTTTCAAAAACCCTCGGCTCCCCAAGACAAGAATGTGACTTTACGGAAGACTGAGACTGGGAATTCTGTTTATCAGCACTCCCAAAAGAACATGACAAAAACCACATGGCCCTCGATTCAGTTTAGCTCTGATGAAGCTGTTGCATGCCGGATGGCAACCAATGAAGTTCAATTTTTTGACGCGGGTGATTTCTCTAAAGGAATTATATATCGATTGAAAGTTCCAGGAGTTGCTGCAATTGAGCTTTCTAAGACCCCTGGATCTCATGTAGCTGTATTAGTTCCGGAGTCCAAGGGGGTTCCTGCTAGTGTGCAGATATTTGCTTGTGACAAAGATTCTCAAAGTCAACCTATTGCCCGACGAAATTTTTTTCGATGCTCAACTGTCCAGTTTAATTGGAATCATGGATCTTCTGGACTTCTAGTGGTGGTGCAATCGGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCCAAGTTATGCTACCTGACAACTGATGGGACTCAAGAAACAGTTGTGGCTCTGCGTAAAGAGGGACCTGTTCATGATGCCCATTGGTCATGTTCTGGCTTGGAATTCGGTGTTCTATATGGTTTTATGCCTGCTTCTGCAACTGTATTTAACAAGAAGGGCAGACCCATACTTGAGCTTGGCAGTGGTCCTTACAATACAATTCGATGGAACCCGAAGGGCAAGTTCTTAGTTTTGGCTGGCTTTGGTAACCTACCTGGTGATATGGAATTCTGGGATTACGCAGAGTTAAAAAAGATTCGAAAAACAAAGGCTGAATGGTCTGTGACTAGTGAATGGTCGCCTGATGGATGCTATTTCATGACGGCCACAACAGCTCCAAGGCTTCAAGTTGATAATGGGGTCAAGGTTTTCAATTATGATGGGTCATTGTACTTCGAGAAGAAGTTTGACAAGTTGTTTCAGGCTGACTGGAAACCAGAGTCACCAAATAAGTTTGGTGACATTGCTGAATTAATCAAATCTCTGGGCACAGTGAAAATTGAAGATAGCAAACGACCAGCTCAAGGGCCAACGACAACCAAAGCTGCTTACTGCCCTCCACATGCCAAGAAGGCAGCCGCTATTCAAGCAGAGTTGTTAGGAATGGACCCCACAGAATCAAGCAACATGAGCAAGAACGCGTTACGAAACAAGAAAAAGAGGGAGCGACAAAGAGAGAAAAAGTCTGCTGAAGCTGCTGGTTCTTCATGA 1515 0.4416 MASKDPPPSLEILVRTPDSFSIWGGPPFPNAQPGVKLDKVSCLNAKFCDNGSRLMVMKTNSVITVYDCANFQEIRSFEIPNVAAAVLSPCGTYLLTFQKPSAPQDKNVTLRKTETGNSVYQHSQKNMTKTTWPSIQFSSDEAVACRMATNEVQFFDAGDFSKGIIYRLKVPGVAAIELSKTPGSHVAVLVPESKGVPASVQIFACDKDSQSQPIARRNFFRCSTVQFNWNHGSSGLLVVVQSDVDKTNQSYYGESKLCYLTTDGTQETVVALRKEGPVHDAHWSCSGLEFGVLYGFMPASATVFNKKGRPILELGSGPYNTIRWNPKGKFLVLAGFGNLPGDMEFWDYAELKKIRKTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGVKVFNYDGSLYFEKKFDKLFQADWKPESPNKFGDIAELIKSLGTVKIEDSKRPAQGPTTTKAAYCPPHAKKAAAIQAELLGMDPTESSNMSKNALRNKKKRERQREKKSAEAAGSS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00012 504 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 499 IPR011387 GO:0003743|GO:0006413
Pral4490g00012 504 Gene3D - 35 393 IPR015943 GO:0005515
Pral4490g00012 504 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Pral4490g00012 504 PIRSF Transl_init_eIF2A 5 504 IPR011387 GO:0003743|GO:0006413
Pral4490g00012 504 MobiDBLite consensus disorder prediction 466 504 - -
Pral4490g00012 504 SUPERFAMILY DPP6 N-terminal domain-like 41 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00012 Pral-Chr4490 105258 110638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00012 11 418 Eukaryotic Initiation Factors Gene Family AT5G27640 22.831 1.30e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00012 K15026 - jre:108982788 763.451