Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00006 ATGATTACGTTGCCATATTCTTCTCCTCTATCTCCCGCCTCTACTTGCTTCCGATCTAAACCCAAATTCAGTACGAGCTGCTTCCTCTCTCGAATTCAAAACAATGATTCTCCAACAAAACCATCCAATTTCGTCCCATTCTCGGGAAATCATCCCTCAGTAACCTTGCAAACCCCAGACGATAACTTCAAGCGAAGAGAGGCTATAATAGGTCTTGCCTTCGGATTCGGCCTTTGCAATGTTGCGCTTCACTCGCTGCCACAAGCCACGGTGGCGGCCGAATCAGCAGCTCCGTGCGAACTAACAGTGGCTGCTTCAGGCATCGCCTTCTGTGATAAAGTTGTGGGAAATGGTCCTCAAGCAGCTAAGGGGCAGCTCATTAAGGCTCATTATGTTGGGAAATTGGAGAATGGGAAGATTTTCGACAGCAGCTATAATCGTGGCAAGCCTCTTACATTTCGCGTTGGCGTTGGGGAGGTGATCAAAGGATGGGATGAAGGGATATTAGGAGGCGAAGGAATACCTCCCATGCTTACAGGAGGCAAACGAACATTGAAAATTCCTCCAGAACTTGCATACGGCTCAAGAGGTGCTGGTTGTAGAGGAGGTTCATGCATCATCCCTCCTGATTCGACCCTGTTATTTGACGTGGAGTTCATAAGCAAGGCCTGA 672 0.4836 MITLPYSSPLSPASTCFRSKPKFSTSCFLSRIQNNDSPTKPSNFVPFSGNHPSVTLQTPDDNFKRREAIIGLAFGFGLCNVALHSLPQATVAAESAAPCELTVAASGIAFCDKVVGNGPQAAKGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGEGIPPMLTGGKRTLKIPPELAYGSRGAGCRGGSCIIPPDSTLLFDVEFISKA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00006 223 Gene3D - 95 223 IPR046357 GO:0003755
Pral4490g00006 223 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 119 220 IPR001179 GO:0003755
Pral4490g00006 223 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 124 223 IPR001179 GO:0003755
Pral4490g00006 223 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 32 221 IPR044183 GO:0009507
Pral4490g00006 223 SUPERFAMILY FKBP-like 101 221 - -
Pral4490g00006 223 FunFam Peptidylprolyl isomerase 96 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00006 Pral-Chr4490 61275 63127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00006 124 221 Calmodulin-binding Proteins AT5G48570 45.918 8.08e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00006 K01802 - cit:102612618 251.906