Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4490g00004 ATGGCTGTACCAGTGAGGATCGTTCCATCTCTTGGAATGCTGTTACTCTTCTTCTTATGGTTCTCTTCTGTTTTGCTTCTTCTCTGTCATGGCAAGTCAGACTCAGATGGTGATTCATCTTCCACGTTGAGGTTGCTCTTGGAGGTGAAGAAGTCGATCATTGAAGACCCAGAAAATGTTTTGGCTGATTGGTCTGAGAACAACACTGATTACTGTAGCTGGAGAGGGATTACTTGTGGATTGAACTCCATGGATGGTTCGGCTACGTTGGTGGGACTTAATCTTTCTGACTCGTCACTCACTGGGTCAATCTCTCCCTCACTCGGTCTCTTACGTGACCTGCTCCAACTTGATCTTTCTTCTAACCGCCTTACTGGTCCCATCCCACCTGCTCTCTCGAACCTCTCTTCTTTGGAGTATCTGCTTCTCTTCTCTAACCAACTCACTGGTCACATCCCAGCTGAGCTCGGCTCGCTCGCGAGTCTCCAAGTCATGAGGATCGGGGACAACCCATTGACAGGTCCCATTCCTTCGTCTTTTGGCAATTTAGTTAGTCTCGTGACTCTTGGCCTGGCCTCTAGTAGTCTCACTGGGTCTATTCCATTGCAACTCGGACGACTCAATCAGCTTGAGAATCTTATTTTACAAGAGAATGAACTCACAGGTCCGATTCCGCCCGAGTTGGGAAATTGTTCGAATCTCACTGTTTTCACTGCTGCAAACAACGGACTCAATGGGACTCTTCCGACGGAACTTGGTGGCCTTGAGAATCTTCAGCTTCTCAACCTCGCGAACAACAGTATAACAGGGGAGATTCCGAGTGAACTGGGGAATCTGAGTCAGCTCACTTATTTGAATCTCATGGGCAACCAACTCGAGGGTCGTATTCCATCGTCTCTAGCTCAACTGGGTAATCTTCAAAATCTGGACTTGTCCCTCAACAAGCTTGTTGGTGGGATTCCTGAAGAACTTGGAAACATGGGTCAGCTAGAGTACATGGTTCTGTCTGGGAATCATCTCTCAGGGACCATCCCAAGAGGCATATGTTCCAACTTGACTAGTTTGGAGCATTTGATGTTGTCGGATACTGCACTGTCTGGAGAGATTCCCAGTGAGTTAATCCAGTGCCAATCCCTGAAACAACTTGATTTGTCAAACAATTCCTTAAATGGATCAATACCCGTTGAACTTTATCAAATGACTGGGTTAACTGATTTGTTACTCAATAACAACAGCTTGGTTGGCTCAATCTCTCCTTTCATAGGAAATCTCAGTAACATGCAGACACTTGCATTGTTCCACAACAATTTACAGGGTGCTCTCCCAGGAGAGGTTGGGATGCTGGGAAAGTTGGAACTACTGTATCTATATGATAATCAATTATCAGGGGAGATTCCCATGGAGATTGGTAATTGTTCAAGCTTGCAGATGATTGATTTCTTCGGAAACAAGTTTTCTGGGGAAATTCCCATCACTATTGGAAGGCTCAGAGACTTGAATTTCCTTCATCTCAGACAGAACGAGCTTGTGGGGGAGATTCCAGCCACTTTGGGTAACTGTCATAAGCTAACTATCGTTGATTTAGCAGACAATTATCTCTCAGGTGGGATTCCTTCAACGTTTGGATTACTGAATGATTTGGAGCAACTCATGCTGTATAACAATTCACTTGAGGGCAATCTCCCTCTCCAACTGATAAATCTGAAGAATCTGACAAGGGTGAATATTTCAAAGAACAGATTGAATGGTAGTTTATCAGCATTATGTCGCTCCCGGAATTTTCTTTCTTTTGATGTCACTAACAATGCATTTGATGGTGAAATTCCACCCCAGCTGGGAAATTCACCTTCTCTTGAGAGGCTAAGATTAGGAAGGAACAACCTTTCTGGTGAAATACCAAGGACATTGGGGAAAATTGAAGAGCTTTCTTTGGTAGACCTGTCTGAAAATTCTCTCACTGGATCAATACCAGCAGAGATTTCCTTGTGCAAGAAGCTAGCTCATATAGATCTGAACAATAATATGCTGTCTGGGCCAATTCCATCCTGGCTTGGAAGCTTGCCTCAGTTGGGAGAGCTTAAGCTCTCCTTTAATCAGTTTTCTGGGATTCTTCCAACAGAGCTGTTTACATGTACTAAATTGCTAGTTCTCTCCGTGAACAGCAACTCTCTTAATGGAAGTATTCCTGATGACATAGGTAATCTCACATCCCTCAACATCCTCAATGTCGAGCAAAATAACTTCTCCGGACCAGTCCCTCCGGCCATAGGTAAGTTAAGCAAGCTTTATGAGCTGAGAATGTCCAGGAACAGCTTTAATGGTGAGATTCCAAGTGAGCTTGGAATGCTGCAGAATCTCCAAAGTATGTTAGACCTCAGTTACAACAATCTCTCTGGTGAAATCCCACATATGCTCGGGACACTGGCAAAGTTGGAAGAGCTTGATCTTTCTCACAATCAACTCACAGGACAAGTCCCTCTTGAAGTTGGTGAAATGAGCAGCTTGGGAAAGCTTAATCTTTCCTACAATAACCTTGAAGGTGAGTTAGATGATCAATTTTCCCATTGGCCGCCTAAGGCTTTTGAAGGTAATTCACATCTTTGTGGAAGCCCTCTTAAACATTGCAATACGGATGGCTCTGGCAATCACCTGTTAGGCCTGAGTAAAACATCAGCAGTGATAATCTCGGCTCTTTCAACATTAGCAGCAGTTGCACTAGCAATACTTGCAGTAAGAATGTTCATGAAGAGCAAGCATGAATTTCTCAGAAAAGGCAGCCAAGTGAACTATATTTACTCCTCCTCTTCATCATCACAAGGGCAACGAAGACCACTCTTCCGGTATAATACAGCTGCAAAGCGAGAGATAAGGTGGGAGGACATCATGGAGGCCACTGAAAATCTAAGCGACGAGTTCATAATTGGTTCGGGAGGATCCGGGACAATCTACAGAGCAGAATTGCCATCAGGAGATACAGTGGCAGTGAAGAGAATTTCAAGAAAAGATGACTTTATGCAGAACAAGAGCTTTGTGAGAGAAGTGAAGACGCTGGGGAGGATCAGGCACAGACATCTAGTGAAGCTGATGGGTTATTGCAGCAACAAGAGCAAAGGAGAAGGATGGAATCTGCTGATATATGAGTTCATGGAGAATGGGAGTGTGTGGGATTGGTTGCATGGGAAACCAGAAAAGACCAGAAGATGCCTTGATTGGGAAGCTAGGTTCAAAATTGCAGTAGGATTAGCCAGAGGAGTGGAGTACCTGCATCATGACTGTGTCCCAAAGATCATCCACAGAGACATCAAATCCAGCAATGTGTTGTTAGATTCCAAAATGGATGCTCACTTGGGAGACTTTGGATTGGCAAAAGAACTCAACATTGACAACTCCAACACTGAATCTAATTCTTGGTTTGCTGGCTCCTACGGCTACATTGCTCCAGAGTGTGCATACTCACTGAAGGCAACAGAGAAGAGTGATGTGTACAGTATGGGGATAGTGTTGATGGAACTGGTGAGTGGGAAGATGCCAACGGATGAAGCATTTGGAGGAGATATGGATATGGTGAGATGGGTTGAAATGAACATTGAGATGCATTCTGAGGAATTGATTGATCCTCAGCTGAAGACTCTGGCGCCAGCACAACAGTTTGCAGCATTCCAAGTTCTTGAGGTTGCGTTGCACTGCACTAAAACGACGCCGCACGAGAGACCGTCTTCGCGCCAAGTCTGTGATCTTCTGCTTCATGTGTTCAGCAACAGAGTGCTTGACTTTGACAAGATGAATCTGAATCGCCACGAGTGA 3804 0.4464 MAVPVRIVPSLGMLLLFFLWFSSVLLLLCHGKSDSDGDSSSTLRLLLEVKKSIIEDPENVLADWSENNTDYCSWRGITCGLNSMDGSATLVGLNLSDSSLTGSISPSLGLLRDLLQLDLSSNRLTGPIPPALSNLSSLEYLLLFSNQLTGHIPAELGSLASLQVMRIGDNPLTGPIPSSFGNLVSLVTLGLASSSLTGSIPLQLGRLNQLENLILQENELTGPIPPELGNCSNLTVFTAANNGLNGTLPTELGGLENLQLLNLANNSITGEIPSELGNLSQLTYLNLMGNQLEGRIPSSLAQLGNLQNLDLSLNKLVGGIPEELGNMGQLEYMVLSGNHLSGTIPRGICSNLTSLEHLMLSDTALSGEIPSELIQCQSLKQLDLSNNSLNGSIPVELYQMTGLTDLLLNNNSLVGSISPFIGNLSNMQTLALFHNNLQGALPGEVGMLGKLELLYLYDNQLSGEIPMEIGNCSSLQMIDFFGNKFSGEIPITIGRLRDLNFLHLRQNELVGEIPATLGNCHKLTIVDLADNYLSGGIPSTFGLLNDLEQLMLYNNSLEGNLPLQLINLKNLTRVNISKNRLNGSLSALCRSRNFLSFDVTNNAFDGEIPPQLGNSPSLERLRLGRNNLSGEIPRTLGKIEELSLVDLSENSLTGSIPAEISLCKKLAHIDLNNNMLSGPIPSWLGSLPQLGELKLSFNQFSGILPTELFTCTKLLVLSVNSNSLNGSIPDDIGNLTSLNILNVEQNNFSGPVPPAIGKLSKLYELRMSRNSFNGEIPSELGMLQNLQSMLDLSYNNLSGEIPHMLGTLAKLEELDLSHNQLTGQVPLEVGEMSSLGKLNLSYNNLEGELDDQFSHWPPKAFEGNSHLCGSPLKHCNTDGSGNHLLGLSKTSAVIISALSTLAAVALAILAVRMFMKSKHEFLRKGSQVNYIYSSSSSSQGQRRPLFRYNTAAKREIRWEDIMEATENLSDEFIIGSGGSGTIYRAELPSGDTVAVKRISRKDDFMQNKSFVREVKTLGRIRHRHLVKLMGYCSNKSKGEGWNLLIYEFMENGSVWDWLHGKPEKTRRCLDWEARFKIAVGLARGVEYLHHDCVPKIIHRDIKSSNVLLDSKMDAHLGDFGLAKELNIDNSNTESNSWFAGSYGYIAPECAYSLKATEKSDVYSMGIVLMELVSGKMPTDEAFGGDMDMVRWVEMNIEMHSEELIDPQLKTLAPAQQFAAFQVLEVALHCTKTTPHERPSSRQVCDLLLHVFSNRVLDFDKMNLNRHE 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4490g00004 1267 Gene3D Ribonuclease Inhibitor 300 378 IPR032675 -
Pral4490g00004 1267 Gene3D Transferase(Phosphotransferase) domain 1 1049 1250 - -
Pral4490g00004 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 380 542 - -
Pral4490g00004 1267 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 209 276 - -
Pral4490g00004 1267 SMART LRR_typ_2 352 376 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 111 134 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 759 783 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 207 231 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 255 279 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 135 159 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 377 400 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 327 351 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 832 863 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 568 591 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 303 326 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 448 472 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 687 711 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 496 520 IPR003591 -
Pral4490g00004 1267 SMART LRR_typ_2 808 830 IPR003591 -
Pral4490g00004 1267 Gene3D Phosphorylase Kinase; domain 1 930 1048 - -
Pral4490g00004 1267 FunFam Piriformospora indica-insensitive protein 2 277 364 - -
Pral4490g00004 1267 SUPERFAMILY L domain-like 351 633 - -
Pral4490g00004 1267 Pfam Leucine Rich Repeat 257 279 IPR001611 GO:0005515
Pral4490g00004 1267 SUPERFAMILY L domain-like 626 873 - -
Pral4490g00004 1267 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 568 879 - -
Pral4490g00004 1267 Gene3D Ribonuclease Inhibitor 379 542 IPR032675 -
Pral4490g00004 1267 Gene3D Ribonuclease Inhibitor 543 879 IPR032675 -
Pral4490g00004 1267 PANTHER UNNAMED PRODUCT 543 1179 - -
Pral4490g00004 1267 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 204 - -
Pral4490g00004 1267 Pfam Leucine rich repeat N-terminal domain 45 79 IPR013210 -
Pral4490g00004 1267 Gene3D Ribonuclease Inhibitor 41 190 IPR032675 -
Pral4490g00004 1267 Pfam Protein kinase domain 973 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00004 1267 PRINTS Leucine-rich repeat signature 808 821 - -
Pral4490g00004 1267 PRINTS Leucine-rich repeat signature 379 392 - -
Pral4490g00004 1267 ProSitePatterns Protein kinases ATP-binding region signature. 974 996 IPR017441 GO:0005524
Pral4490g00004 1267 FunFam Leucine-rich repeat receptor-like protein kinase 1049 1264 - -
Pral4490g00004 1267 Gene3D Ribonuclease Inhibitor 191 299 IPR032675 -
Pral4490g00004 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1096 1108 IPR008271 GO:0004672|GO:0006468
Pral4490g00004 1267 SUPERFAMILY Protein kinase-like (PK-like) 951 1247 IPR011009 -
Pral4490g00004 1267 SUPERFAMILY L domain-like 44 393 - -
Pral4490g00004 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 928 1048 - -
Pral4490g00004 1267 SMART serkin_6 968 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4490g00004 1267 ProSiteProfiles Protein kinase domain profile. 968 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4490g00004 Pral-Chr4490 40437 44329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4490g00004 27 710 Receptor kinase-like Gene Family AT1G17750 37.246 7.47e-107 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4490g00004 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4490g00004 - - gmx:100801889 1784.62