LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral448g00006	ATGACGGTGACGGTGACGGTGACGGTGACGATCAAGTTCGCTTCCGATAGGCACTGGATTTCCACTTTGCTCCCACACTCACAGACAAAAGCAGCTTCGGTCGCAACTTTTTACCTACTCCCGCTCCCATTCACCACCGCCCCATCTCGGTGGGGTGGCGCCACCGTGATGGCTCTGTCGGGAACAGCCTCAAATGCAGAACTCGGCCCTACTGTCATCGCCGTTGATGACGACGTCAACAGCGTGTACGCTGTCAAATGGGCAATTCATAATCTTTTACAGAAGAACTCAGCTTCCACCCTCATTCACGTTCGGACTAAGAATTTACATCCTCATGATGTTGATTCTGTCCCTAAAGAAGGTCGTCCACCAACTGAAGAAGAATCAAAACAAGTTTTTCTTCCCTTCCGAGAATTTTTTGCACAAGAACGGATCACAGCGAAGGAGTTGGTTCTGCACGGCAATGATGTTACGAGTACACTAACCGATTACATCATTGAACACTCTATCAGCAATATTGTTGTTGGCGCTTCCCATCGGAATGCTCTTACAAGGAAATATAAAGGGTTAGGTGTTTCAAACAGTTTAATGAGGTCCGTGCCAGAGTGCTGCACAGTACATATTATATCAAAAGGAAAAGTGCTAAATATCCAGCCAACAGGTTTCCCTCAAAGCATAAGCATCATACCAACTACATCGATGGAAGACTCATACTACGATCCCCAGGGAAAGTCACAACCGGATCATTTGCATAATCTTCTTCCTGATACTTCAGATTCCGAAGATATAAACAGAAAATCATTCAAACATTTTTGGCCAGGCTCAGGTCTTGATAGGGTTTATATTGGTGAAAACAACGACACTGTGCAGGTGGTAACTCATGAGTCCTCCGAAGAGGCTAATTTATCAAAGGTGGAAACACATAAGTCCTATGACGAGGATAATTTAGCAAGATTAGTGGTTGAAAACACCTCACCAAAGGATTCATCAAATCAAAATTCCCTTTCATTCACTGGTGACAATTCAAGGATGCTTAGTTCCCAGTTGGCTCCTTTGTTACCTGAAAACCAAGCAGTATCTGTGAACTCACACGGTCTCTGGAGGGCCTCATCAAATGCCAAAAAAGGCTTGAGTATTGAAATGAGGCAATTAAGCCTAGAATTGAAAAAAACAATGGAGAAGTATAGCTCAGCCTGTAGAGAAGCCATCGCAGCAAAACAGAAGGTAATGGAGCTTGAACAGATTATGCAAGAAGAAGAACGCAACTTAAAACATGCAGAAATAAGGGCCATGCAGGAAGAGGAAGAGAGGAAGACAGAATCAAATATGTTGACTCATGATAATATTCAATGTAGAAAATTCGATGTCAAGGACATTGAAGTTGCAACTCGCTGCTTTAATAGTCATTTGAAAATTGGTGATGGTGGATGCGGGTCTGTTTATAAAGGTGTGCTTGATTTCACTGATGTTGCAATTAAGGTCTTGAGACCAGACATAGACCAAGGAGAGAAGCAATTTCAACAAGAGGTACTTATTTTGAGCACCATACGGCATCCAAACATTGTTCTCCTGCTAGGTACCTGCCCAGAGTATGGATGCCTTGTGTACGAGTACCTGGAAAATGGCAGCTTAGAAGATCGCCTCTTCCAGAAAAATAACACTCCCCCACTTCCATGGGGAATTAGATTCAAAATAGCAGCAGAAATCGCCACCGGCCTTCTTTTCCTTCACAAGACAACACCCAAACCATTGGTGCACCGTGACCTCAAGCCATCAAACATTCTGCTGGATGGGAACTATGGGAGCAAGATAAGTGATGTTGGTTTGGCTCATCTTGTTCCTCCTTCTATACCTGACAAAACCACTGAGTATCACATGACAGCTGCAGTTGGTACATTTTGTTATATTGACCCAGAGTATCAACAAACAGGATTATTGGGAGTAAAATCAGATATATATTCGCTAGGTATAATTCTGCTACAAATTCTTACTGCTAAGCCTCCTATAGGTTTATCTCTCCTTGTTGAGCAGGCCATCCAAGAAGGTACTTTTCAAGAGGTACTTGATGCAAGTGTGCCAGATTGGCCTGTTGAAGAGGCTTTATCTTGTGCTTTGTTGGCTTTAAAGTGCTGCGAGATGAGGAAAAGGGACAGACCAGACCTGGGTTCTGTTATTTTGCCAATGCTAAATCGACTCAGAGATCTGGGAGGAGCCTTTGGAGGTGATGGCCTTCCTGCAAGCCAGGTACGAGAGCGAAGGTGGCAACCCTTCAAGTCCATCGCCAACCTATTGAGCTTCAATCGTAATTCCGAGAAGCCAGGCCTCTTACCACCAACAGGGAAGAAGCATTTGGGGGAAACAAAAAAGGACATTTACAGGGGCTGCTTCTCTTTAGTAAGTTGCTCCAAACACAACCGGAATCTAAAGAAGTTCCACTCTTTCTCTTCAATTGAGTGA	2457	0.4387	MTVTVTVTVTIKFASDRHWISTLLPHSQTKAASVATFYLLPLPFTTAPSRWGGATVMALSGTASNAELGPTVIAVDDDVNSVYAVKWAIHNLLQKNSASTLIHVRTKNLHPHDVDSVPKEGRPPTEEESKQVFLPFREFFAQERITAKELVLHGNDVTSTLTDYIIEHSISNIVVGASHRNALTRKYKGLGVSNSLMRSVPECCTVHIISKGKVLNIQPTGFPQSISIIPTTSMEDSYYDPQGKSQPDHLHNLLPDTSDSEDINRKSFKHFWPGSGLDRVYIGENNDTVQVVTHESSEEANLSKVETHKSYDEDNLARLVVENTSPKDSSNQNSLSFTGDNSRMLSSQLAPLLPENQAVSVNSHGLWRASSNAKKGLSIEMRQLSLELKKTMEKYSSACREAIAAKQKVMELEQIMQEEERNLKHAEIRAMQEEEERKTESNMLTHDNIQCRKFDVKDIEVATRCFNSHLKIGDGGCGSVYKGVLDFTDVAIKVLRPDIDQGEKQFQQEVLILSTIRHPNIVLLLGTCPEYGCLVYEYLENGSLEDRLFQKNNTPPLPWGIRFKIAAEIATGLLFLHKTTPKPLVHRDLKPSNILLDGNYGSKISDVGLAHLVPPSIPDKTTEYHMTAAVGTFCYIDPEYQQTGLLGVKSDIYSLGIILLQILTAKPPIGLSLLVEQAIQEGTFQEVLDASVPDWPVEEALSCALLALKCCEMRKRDRPDLGSVILPMLNRLRDLGGAFGGDGLPASQVRERRWQPFKSIANLLSFNRNSEKPGLLPPTGKKHLGETKKDIYRGCFSLVSCSKHNRNLKKFHSFSSIE	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral448g00006	818	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	584	596	IPR008271	GO:0004672\|GO:0006468
	Pral448g00006	818	Gene3D	Transferase(Phosphotransferase) domain 1	539	735	-	-
	Pral448g00006	818	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	72	207	-	-
	Pral448g00006	818	ProSiteProfiles	Protein kinase domain profile.	466	729	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral448g00006	818	PANTHER	OS02G0152300 PROTEIN	72	744	-	-
	Pral448g00006	818	Gene3D	HUPs	71	209	IPR014729	-
	Pral448g00006	818	Coils	Coil	402	443	-	-
	Pral448g00006	818	CDD	STK_N	70	212	-	-
	Pral448g00006	818	CDD	UDM1_RNF168_RNF169-like	400	444	-	-
	Pral448g00006	818	Coils	Coil	374	394	-	-
	Pral448g00006	818	SUPERFAMILY	Protein kinase-like (PK-like)	442	725	IPR011009	-
	Pral448g00006	818	Gene3D	Phosphorylase Kinase; domain 1	430	538	-	-
	Pral448g00006	818	Pfam	Universal stress protein family	72	201	IPR006016	-
	Pral448g00006	818	Pfam	Protein kinase domain	468	720	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral448g00006	818	SMART	serkin_6	466	729	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral448g00006	818	FunFam	Os07g0541700 protein	539	630	-	-
	Pral448g00006	818	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	438	538	-	-
	Pral448g00006	818	MobiDBLite	consensus disorder prediction	235	261	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral448g00006	Pral-Chr448	54174	62162	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral448g00006	69	736	Receptor kinase-like Gene Family	AT1G78940	40.859	1.67e-177	527

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Pral448g00006		Pkinase	1.7e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral448g00006	-		-	pcin:129290405	732.25