Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4488g00026 ATGGAGAAGCATTCAGAGAAGCAGAAATCATCTGCTAATGATCATAATGCTGGTGAATTGGCATTCATTTCCTCTTATTCAGAAGACAGCCGGGAATCTGTGGACAAGTGGATGGCATTTCCTAGCGAATCAAATTTTGTCAATTCTAGCAGCTCAGCAAATATGGATGATTTTGGGGCTAACAATGGAAAGAAAGATGATAATGCAAGGGGACGTCTGAATGAGAAGACACCTTTTAATCATCAAATTTTGACTGAAGCAAGCATTGCTGAGAGAACTGCCGAATGGGGCCTTGTGATGAACTCAGGTAGTTTTAAAGCAGTAGGAGGAGTGACAACTAGTTCCTCCCTCGATGGTGAAAAAAGCAAAAATTTGTCAGATAGATTTACTGCAGCAGTATCAACAAGGACATCTGAAGAATCAAATCATGGGTCAGAGTCATCATCAGGGGCATTCCCGAGGGTATCACAAGAGTTGAAGGAAGCCTTGGCGTCACTGCAACAAACGTTTGTTGTCTCAGATGCAACTAAACCAGACTGCCCAATAATGTATGCCAGCAGTGGATTTTTCAGTATGACAGGTTATTCTTCAAAGGAGATCATTGGGAGGAATTGCCGGTTTCTTCAGGGCCCTGAAACAGACCAGAAAGAAGTGGCCAAAATTCGAGATGCAGTTAAAAACGGAAAAAGCTATTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCCTGTTCTGGAATCTTCTTACTATCACTCCTATAAGAGATAGCCAGGGCAATGTCATCAAGTTCATTGGAATGCAGGTTGAGGTGAGCAAATATACTGAAGGTGTGAATGAAAAGGCGTTGCGGCCAAATGGGTTGCCTAAGTCATTAATTCGTTATGATGCCCGTCAAAAGGAAAAAGCTTTGGGTTCCATCGCAGAGGTTGTCCAAACTGTCAAGGACCCAAAATCCATCATTCGGTCTGTGAGCCAAGACAATGCCATTAAACTTGAAGAGCAAGAAAAAATCAATTCTGATTTTGTTTTGCCGAAATCTGTTGAAATTGAGAGTACTAGTTCAACAAAGAGGCAAACTACTTCACTAGACTTCGACGTTGATAAAAGCAAAAGGAAGTCAGGGCGCATTTCTTTCATGAGTTTTAAAGGGAGATCTCCAAGCTCTACAGGGAAGCATGATGAAAAGCCCATTGTTGAGCCAGAGGTTTTGATGACTAAGGACATGGAACGTTCTGACAGTTGGGAGCGTGCTCAAAGAGAGAGGGATATACGACAGGGAATCGATCTAGCAACCACATTGGAGCGCATTGAAAAGAATTTTGTGATTTCGGATCCTAGACTTCCAGACAACCCAATTATATATGCGTCTGATAGCTTTCTTGAACTTACAGAATATACTCGAGAGGAAATATTAGGAAGAAACTGTCGGTTTCTTCAAGGACCAGAAACAGATCAAGCAACCGTAGCAAAGATTAGAAGTGCTATAAGAGAACAAAGGGAAATCACTGTTCAGCTTATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTCCACTTGCAGCCTATGCGTGATCAAAAGGGTGAGCTTCAATACTTTATAGGCGTCCAATTAGATGGAAGTGATCATGTGGAACCTTTAAGAAACCGCCTATCTGAGAAAACAGAGCAACAAAGTGCAAAGTTGGTCAAAGCAACTGCAGAAAATGTTGATGAGGCTGTTCGAGAGCTTCCTGATGCCAACTTGAGACCGGAAGATTTGTGGGCAATTCATTCTCAGCCTGTCTTCCCGAGACCTCATAAAAAGGAAAGTTCTTCTTGGTTAGCAATCCAGAAGCTAACTGCAAGTGGCGAAAAAATTGGACTGCATCATTTTAAGCCAATAAGGCCGTTGGGTTGTGGTGATACTGGCAGTGTTCACCTTGTGGAGCTTCAAGGTGCAGGTGAACTATATGCAATGAAGGCAATGGAAAAATCAGTCTTGCTAGATCGTAATAAGGTTCATCGAGCATGCATTGAGAGAGAGATTATATCGTTGCTGGATCATCCTTTTCTTCCCTCTCTATACACTTCTTTTCAGACTTCTACACATGTATGCTTGATAACAGACTTCTGCCCTGGTGGTGAATTATTTGCATTGTTGGATAAGCAACCCATGAAGATTTTCAAGGAGGAATCAGCAAGATTCTATGCAGCAGAGGTTGTTATTGGTTTAGAATACCTCCACTGCTTAGATTCCTGA 2247 0.4192 MEKHSEKQKSSANDHNAGELAFISSYSEDSRESVDKWMAFPSESNFVNSSSSANMDDFGANNGKKDDNARGRLNEKTPFNHQILTEASIAERTAEWGLVMNSGSFKAVGGVTTSSSLDGEKSKNLSDRFTAAVSTRTSEESNHGSESSSGAFPRVSQELKEALASLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEIIGRNCRFLQGPETDQKEVAKIRDAVKNGKSYCGRLLNYKKDGTLFWNLLTITPIRDSQGNVIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEKALGSIAEVVQTVKDPKSIIRSVSQDNAIKLEEQEKINSDFVLPKSVEIESTSSTKRQTTSLDFDVDKSKRKSGRISFMSFKGRSPSSTGKHDEKPIVEPEVLMTKDMERSDSWERAQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIYASDSFLELTEYTREEILGRNCRFLQGPETDQATVAKIRSAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKESSSWLAIQKLTASGEKIGLHHFKPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSVLLDRNKVHRACIEREIISLLDHPFLPSLYTSFQTSTHVCLITDFCPGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLDS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4488g00026 748 ProSiteProfiles PAS repeat profile. 426 499 IPR000014 -
Pral4488g00026 748 FunFam LOV domain-containing protein 626 710 - -
Pral4488g00026 748 MobiDBLite consensus disorder prediction 111 153 - -
Pral4488g00026 748 ProSiteProfiles PAC domain profile. 500 554 IPR000700 -
Pral4488g00026 748 FunFam Putative LOV domain-containing protein 169 325 - -
Pral4488g00026 748 Pfam Protein kinase domain 629 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4488g00026 748 SUPERFAMILY PYP-like sensor domain (PAS domain) 445 541 IPR035965 -
Pral4488g00026 748 CDD PAS 449 541 IPR000014 -
Pral4488g00026 748 ProSitePatterns Protein kinases ATP-binding region signature. 633 656 IPR017441 GO:0005524
Pral4488g00026 748 FunFam LOV domain-containing protein 415 579 - -
Pral4488g00026 748 Gene3D Transferase(Phosphotransferase) domain 1 711 745 - -
Pral4488g00026 748 Gene3D Phosphorylase Kinase; domain 1 625 710 - -
Pral4488g00026 748 ProSiteProfiles PAS repeat profile. 155 228 IPR000014 -
Pral4488g00026 748 SUPERFAMILY Protein kinase-like (PK-like) 604 745 IPR011009 -
Pral4488g00026 748 NCBIfam PAS domain S-box protein 452 544 IPR000014 -
Pral4488g00026 748 NCBIfam PAS domain S-box protein 181 273 IPR000014 -
Pral4488g00026 748 ProSiteProfiles Protein kinase domain profile. 627 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4488g00026 748 SMART serkin_6 627 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4488g00026 748 Coils Coil 550 570 - -
Pral4488g00026 748 Pfam PAS domain 449 541 IPR000014 -
Pral4488g00026 748 Pfam PAS domain 176 272 IPR000014 -
Pral4488g00026 748 CDD PAS 182 271 IPR000014 -
Pral4488g00026 748 ProSiteProfiles PAC domain profile. 229 283 IPR000700 -
Pral4488g00026 748 MobiDBLite consensus disorder prediction 127 153 - -
Pral4488g00026 748 Gene3D PAS domain 169 342 - -
Pral4488g00026 748 SUPERFAMILY PYP-like sensor domain (PAS domain) 176 268 IPR035965 -
Pral4488g00026 748 MobiDBLite consensus disorder prediction 45 73 - -
Pral4488g00026 748 SMART pac_2 232 274 IPR001610 -
Pral4488g00026 748 SMART pac_2 503 545 IPR001610 -
Pral4488g00026 748 PANTHER PROTEIN TWIN LOV 1 348 619 - -
Pral4488g00026 748 Gene3D PAS domain 415 579 - -
Pral4488g00026 748 SMART pas_2 157 226 IPR000014 -
Pral4488g00026 748 SMART pas_2 428 497 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4488g00026 Pral-Chr4488 122475 139254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4488g00026 87 746 AGC Kinase Gene Family AT5G58140 72.973 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral4488g00026 Pkinase 9.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4488g00026 K20715 - gmx:100804783 1120.53