Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4488g00019 ATGTATCCCAGGCTGATTCACTCGCACGAAGGGATGGTTGGTCAGGAAGACATGCAGGGTGGGTCCAACCACGGTCACAACAACAACGGAGACCCATGTCTGGTGTTGACCGCCGATCCCAAACCACGTCTGCGTTGGACCCAGGACCTCCATGAACGATTCGTCGATGCTGTTACTCAGCTTGGGGGTGCTAGCAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTAAAGGGTTTGACTTTATTTCATTTGAAGAGTCACCTTCAGAAGTACAGACTCGGCAAGCAATCAGGCAAAGATATGATTGAGGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGTACTGATAACTCTTCCCCAAAGTTGCCAGCTTCTGATACGAATGAGAGTCATGAAATCAAGGAGGCTTTAAGACGACAGATGGAGGTACAAAGTGAACTACATTTGCAAGTGGAGGCGGAGAAGCATTTGCAGATTCGACAGGATGCAGAGCAAAGATACATGGCCATGCTCGAAAGAGCTTGCAAGATGCTGGCTGATCAGTTTATTGGTGCTACAGTTATAGACACCGACAACCAAAAATTTCAAGGGCATGGAAGTAAAGCACCAAGAGGTCCCTTTGTTGACACTCTTGGCTTTTACTCCTTACCATCTACTGGGACGACTGGAGCAGTTCATGCTTCCGGAGAGGAATTACCTAATCTCCATTCCCAAAGGGCTGACTGTTCGACAGAAAGTTGCCTAACATCACACGAAAGTCCTGGAGGTTTGACATTGGAAGGATCTCCCATTAGTGGGGCAAACAAGAGGATGCTGAGCTTGGAATCCATGGCAGCAACCCCCTTAATCTGGAGTGAAGCCACCATGAGAAGTCAAGGCATCAATGTGGCTCAAGGTAACCTGCACGGAATAACTAGGTATGGTATGTAG 942 0.4756 MYPRLIHSHEGMVGQEDMQGGSNHGHNNNGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMIEGCKDGSYLLESPGTDNSSPKLPASDTNESHEIKEALRRQMEVQSELHLQVEAEKHLQIRQDAEQRYMAMLERACKMLADQFIGATVIDTDNQKFQGHGSKAPRGPFVDTLGFYSLPSTGTTGAVHASGEELPNLHSQRADCSTESCLTSHESPGGLTLEGSPISGANKRMLSLESMAATPLIWSEATMRSQGINVAQGNLHGITRYGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4488g00019 313 Gene3D - 40 98 - -
Pral4488g00019 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 260 IPR044848 GO:0003700
Pral4488g00019 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 98 IPR017930 -
Pral4488g00019 313 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Pral4488g00019 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 41 96 IPR006447 GO:0003677
Pral4488g00019 313 MobiDBLite consensus disorder prediction 115 130 - -
Pral4488g00019 313 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Pral4488g00019 313 MobiDBLite consensus disorder prediction 1 30 - -
Pral4488g00019 313 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Pral4488g00019 313 MobiDBLite consensus disorder prediction 111 133 - -
Pral4488g00019 313 FunFam Myb family transcription factor 40 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4488g00019 Pral-Chr4488 99370 104833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4488g00019 20 271 G2-like Transcription Factor Family AT4G13640 47.308 2.24e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4488g00019 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4488g00019 - - gmx:100786397 491.886