Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral447g00002 ATGCCGGCCGGGATTATGATTCCGGCAAGAAATATGCCCTCGATGATCGGGAGGAACAACAACGTTGGTGGCGGGTTTGGATCATCCTCAGGCCTTTCTCTTGGTCAGCCAAACATGATGGAAGGTCAGCTCCTCCCAGCACTGGACATGGCTCCAAACACATCAGAGAGCGACATCCCTCGAATCCGAGACGACGATTTCGACACTGCCACCAAGTCCGGGAGTGAAAATCAGGAAAATGGCGCCTCCGGTGACGACCAAGACCAACGCCCCAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTCAAGGAGTGCCCTCATCCCGATGACAAGCAAAGGAAGGAGCTAAGTCGCGAATTAGGGTTGGAGCCATTGCAGGTCAAGTTCTGGTTCCAAAACAAACGCACCCAGATGAAGAACCAACATGAGCGGCACGAGAACTCGCACCTCAGAGCCGAAAATGAAAAGCTTCGTGCCGATAACATGAGGTACAGAGAAGCTCTTGGCAATGCCTCTTGTCCTAACTGTGGTGGACCAACCGCTATAGGAGAAATGTCCTTCGATGAACATCATTTGAGACTCGAAAATGCCCGCCTAAGAGAAGAGATTGATAGAATTTCCGCAATTGCTGCCAAGTACGTAGGGAAGCCGGTGGTGAACTATCCGCTACTCTCTCCATCTTCGGTTCCACCTCGTCCTCTAGAGCTTGGGGTTGGCGGTGGTTATGGCGGACAGGCAGGTATTGCTGGCGGCACCGGTGACATGTATGGAGGAGCCGGAGATCTTTTGAGGTCCATAAGTGGACTCACAGAAGCCGATAAGCCGATGATCATAGAGCTTGCTGTTGCGGCCATGGAAGAACTGGTGAGAATGGCTCAGATGGGGGAGCCTCTTTGGATGACCACCCTCGATGGCTCCACCACTGTGCTCAATGAGGAAGAGTACATGAGGTCTTTTCCTCGAGGAATTGGACCTAAACCCAGCGACTTGAAATGCGAAGCTTCACGAGAAACTGCACTTGTCATCATGAATCACATCAACCTCGTCGAGATTCTCATGGATGTGAACCAGTGGTCGACAGTGTTCTCTGGCATAGTGTCAAGAGCAATGACCATGGAAGTACTATCAACGGGGGTGGCCGGGAACTACAACGGTGCCTTGCAAGTGATGACAGCAGAGTTGCAAGTGCCTTCACCTCTAGTGCCAACTCGAGAGAGTTATTTCGTGAGGTATTGTAAGCAGCACGCTGACGGCACATGGGCAGTAGTGGACGTCTCTCTCGACCATCTCAGCACTGCTCCTGTCAAATGTAGAAGACGACCTTCTGGTTGCTTAATCCAAGAAATGCCCAATGGCTATTCCAAGGTGACGTGGATTGAACATGTAGAAGTGGATGATAGAGGTGTACATAGTCTATACAAGCAGCTCGTTAGTTCAGGCCACGCTTTTGGTGCAAAACGATGGGTTGCCACCTTGGATCGACAGTGCGAAAGGCTTGCTAGTGCCATGGCTTCCAACATTCCCACTGCTGATGTTGGAGTGATAACAAACCAAGACGGGAGGAGGAGCATGTTGAAGCTGGCGGAGAGAATGGTGATAAGCTTCTGTGCGGGAGTGAGCGCTTCCACGGCTCACACATGGACAACACTCTCTGGAACCGGGGCGGACGATGTTCGGGTCATGACCCGAAAGAGCGTGGACGACCCGGGAAGACCTCCTGGTATTGTTCTAAGTGCCGCAACCTCTTTCTGGCTTCCTGTTCCCCCCGAGCGAGTTTTTGACTTCCTCCGTGATGAAAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGTGGGGTGGTCCAAGAAATGGCACACATAGCTAACGGACGAGATACGGGGAATTGTGTGTCCCTTCTCCGAGTGAATAGTGCAAATTCGAGCCAAAGCAATATGTTGATACTGCAAGAGAGCTGCACCGACTCAACGGGGTCTTTCGTCATATATGCTCCTGTAGATATAGTAGCCATGAACGTGGTGCTGAATGGAGGGGATCCTGATTACGTGGCACTTCTTCCTTCGGGTTTTGCTATCCTACCCGATGGCACCACGCCTCATGGAGGTGCCATCGTTGAAACAGGCCACGGCGGATCCCTTTTGACCGTTGCTTTTCAAATCTTGGTTGATTCCGTACCCACTGCTAAGCTCTCTCTTGGATCTGTCGCCACCGTCAACAACCTTATTGCCTGCACTGTGGAGAGAATTAAGGCTTCTTTATCCTGCGAAGCTGCTTGA 2301 0.5159 MPAGIMIPARNMPSMIGRNNNVGGGFGSSSGLSLGQPNMMEGQLLPALDMAPNTSESDIPRIRDDDFDTATKSGSENQENGASGDDQDQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSHLRAENEKLRADNMRYREALGNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPSSVPPRPLELGVGGGYGGQAGIAGGTGDMYGGAGDLLRSISGLTEADKPMIIELAVAAMEELVRMAQMGEPLWMTTLDGSTTVLNEEEYMRSFPRGIGPKPSDLKCEASRETALVIMNHINLVEILMDVNQWSTVFSGIVSRAMTMEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDHLSTAPVKCRRRPSGCLIQEMPNGYSKVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMASNIPTADVGVITNQDGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPERVFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTPHGGAIVETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral447g00002 766 ProSiteProfiles START domain profile. 279 510 IPR002913 GO:0008289
Pral447g00002 766 Pfam Homeodomain 93 149 IPR001356 GO:0003677
Pral447g00002 766 FunFam Homeobox-leucine zipper protein HDG1 78 166 - -
Pral447g00002 766 Coils Coil 144 176 - -
Pral447g00002 766 Pfam START domain 289 507 IPR002913 GO:0008289
Pral447g00002 766 Gene3D - 357 504 IPR023393 -
Pral447g00002 766 SMART START_1 288 507 IPR002913 GO:0008289
Pral447g00002 766 Gene3D - 78 167 - -
Pral447g00002 766 MobiDBLite consensus disorder prediction 58 72 - -
Pral447g00002 766 MobiDBLite consensus disorder prediction 50 101 - -
Pral447g00002 766 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Pral447g00002 766 SUPERFAMILY Bet v1-like 527 758 - -
Pral447g00002 766 FunFam Homeobox-leucine zipper protein GLABRA 2 288 506 - -
Pral447g00002 766 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Pral447g00002 766 SUPERFAMILY Bet v1-like 280 509 - -
Pral447g00002 766 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 89 761 IPR042160 -
Pral447g00002 766 SUPERFAMILY Homeodomain-like 82 150 IPR009057 -
Pral447g00002 766 SMART HOX_1 91 154 IPR001356 GO:0003677
Pral447g00002 766 CDD START_ArGLABRA2_like 283 506 - -
Pral447g00002 766 CDD homeodomain 93 151 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral447g00002 Pral-Chr447 23013 27940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral447g00002 62 766 Homeobox Transcription Factor Family AT1G05230 81.127 0.0 1150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral447g00002 START 2.6e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral447g00002 K09338 - gmx:100797992 1305.04