Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4474g00023 ATGGCTATGGCAATGCTGAATTGGATACCGGACGCTGCGAGGAATTTGGCCCACGAGCACGCGCAGGTGATACCCATTTCGCTCTTCGTGGCGGTTCTCTGCCTCTGCTTGCTCATCGGTCACTTGCTCGAAGATAACCGTTGGGTTAATGAATCCATCGTCGCCATTCTAGTTGGATGTATTGCTGGAATGATTCTCTTGTTCATCACCAAGGGGACGAGTTCTCGCATCCTTACATTCAACGAAGAGCTTTTCTTCATATATCTTCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTCTTAACTATCATGCTATTTGGGGTGATCGGTGTTTTTATATCAGCATCTATTATTGTAACTGGCAGTTGGTGGCTATTTCCCAAGTTAAACTTTAATGGTCTGACAGTGCAAGATTATCTTGCTATAGGAACGATTTTCTCTTCAACAGATACAGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTCTATTATACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCGACATCAGTTGTTCTCTTCAATGCGGTGCAGAAGCTTGATGCTTCGAAAGTTCATGGCAGCGCACTCCATGTCATTGGAGATTTCTTCTACCTGTTCTCCACAAGCACTGCTCTAGGATTCATTTCTGGACTTATCACAGCATACATCCTGAAAGCCTTCTGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTCCTAGAACTCAGTGGAATCCTCACTGTTTTCTTCTGCGGAATATTAATGTCACACTATGCATGGCATAATGTGACTGAAACTTCAAGAGTCACAACCAGGCATGTCTTCGCGACAATGTCATTTATTGCGGAAACCTTTATATTTCTTTATGTGGGCATGGATGCTCTGGACATGGAGAAGTGGAGGATTACGAAATTAAGTTTTGGGAGGTTGATGGGAATTTACAGTTGCTTAATCTTCCTGATATTGCTTGGGCGGGCTGCTTTTGTTTTCCCTCTCTCTGCTTTTGCCAACTGTATGAATAGGCGTGCTCATAGAGACTCAAGAATCACATTTAGGCATCAGATAATCATTTGGTGGGCTGGACTTATGAGGGGGGCAGTCTCGATTGCTCTGGCTTTCAAACAATTCACATATTCTGGTGTTACGTCTGATCCTGTTGATGCAACAATGATCACCAACACCATCATTGTTGTTCTTTTCAGCACGCTGGTGTTTGGGTTTCTCACGAAACCACTTATCCGTTATCTTCTTCCCCATAGCACGACGAGGAAGAACATCATCCATCAGGAATCTGGTCCTCCTGTTGAGGACCTGAATCTGCCGTTGCTATCCTTTGAGGAGTCAGCAGAAACCAACTTCAGTCGTGCAAAGGAAAATCTGTCCATGCTAATGGAAAGTCCTGTCTACACCATACACCATTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTTAG 1569 0.4385 MAMAMLNWIPDAARNLAHEHAQVIPISLFVAVLCLCLLIGHLLEDNRWVNESIVAILVGCIAGMILLFITKGTSSRILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISASIIVTGSWWLFPKLNFNGLTVQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDASKVHGSALHVIGDFFYLFSTSTALGFISGLITAYILKAFCFGRHSSVREIALMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRHVFATMSFIAETFIFLYVGMDALDMEKWRITKLSFGRLMGIYSCLIFLILLGRAAFVFPLSAFANCMNRRAHRDSRITFRHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVDATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSTTRKNIIHQESGPPVEDLNLPLLSFEESAETNFSRAKENLSMLMESPVYTIHHYWRRFDDAYMRPIFGGPLA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4474g00023 522 PANTHER SODIUM/HYDROGEN EXCHANGER 18 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pral4474g00023 522 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4474g00023 522 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4474g00023 522 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4474g00023 522 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4474g00023 522 Gene3D - 144 197 - -
Pral4474g00023 522 Pfam Sodium/hydrogen exchanger family 29 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4474g00023 Pral-Chr4474 961980 967883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4474g00023 14 520 Antiporters AT5G55470 72.852 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4474g00023 - - gmx:100813332 854.744