Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4474g00020 ATGCCTGAACAAGGAATTTGCAGTTCATTGAAAGAACCTCGTCTTGTGGCGAGGAAATTCTTGGCCAGGCCTCAGCGTGAAGGCGTTGGCGCTGTTGTTAGAAGAAGCATCGGACGGTTTGAGCTCAAGTACTTTGATCCTTTTCTGGTGTTGGATGAATTCTTAGTTTCTGCTCCAGCTGGCTTCCCTGATCATCCACATAGAGGGTTCGAGACAGTCACATATATGTTGCAGGGAGCTATAACACATGAGGATTTTGAAGGGCACAAGGGAACAATTGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAGATGCCTGCAGCTCAGGGAATTCAAAAGGGTCTTCAGCTTTGGATCAATCTTGCTTCCAATGATAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATAGCAGAAGTAGTGGAAGGTGGCATCAAAGTAAGGGTTATAGCAGGAGAAGCCTTAGGAACAAAGTCTCCAATCCAAACAAGAACTCCAACAATGTACTTGGATTTCTCTCTCAAACCTGGGGCCCACTTGCAGCAACCTATTCCAAAGTCATGGAATGCTTTTGCCTATGTTTTGGAAGGAGAAGGCCTGTTTGGGAACACGAAATCTCAGCCTGTCTCTTCACATCATATACTTCTTCTTGGTTCAGGAGATGGGCTTGAGGTATGGAACCGGTCCTCTAATAAGGTGCTTAGGTTTGTACTTGTTGGAGGCCAACCATTGGGTGAGCCTGTGGCTCAGTTTGGACCCTTCGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTGTGTCAATGGGTTTGAGAAAGCAAGACATTGGAAGTCTGAGGCTGCAATTTCCCTTGACTTCTAA 909 0.4554 MPEQGICSSLKEPRLVARKFLARPQREGVGAVVRRSIGRFELKYFDPFLVLDEFLVSAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASNDKMIEPRYQEMLSKDIAEVVEGGIKVRVIAGEALGTKSPIQTRTPTMYLDFSLKPGAHLQQPIPKSWNAFAYVLEGEGLFGNTKSQPVSSHHILLLGSGDGLEVWNRSSNKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQTIDDFENCVNGFEKARHWKSEAAISLDF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4474g00020 302 SUPERFAMILY RmlC-like cupins 14 294 IPR011051 -
Pral4474g00020 302 CDD cupin_pirin_N 31 128 - -
Pral4474g00020 302 Gene3D Jelly Rolls 27 280 IPR014710 -
Pral4474g00020 302 PANTHER PIRIN-RELATED 8 296 IPR012093 -
Pral4474g00020 302 Pfam Pirin C-terminal cupin domain 179 284 IPR008778 -
Pral4474g00020 302 FunFam pirin 27 165 - -
Pral4474g00020 302 PIRSF Pirin 12 293 IPR012093 -
Pral4474g00020 302 Gene3D Jelly Rolls 148 254 IPR014710 -
Pral4474g00020 302 CDD cupin_pirin_C 176 253 - -
Pral4474g00020 302 Coils Coil 302 302 - -
Pral4474g00020 302 Pfam Pirin 33 126 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4474g00020 Pral-Chr4474 884927 888782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4474g00020 13 290 Calmodulin-binding Proteins AT3G59220 58.065 3.60e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4474g00020 K06911 - gmx:100811930 543.888